Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

HE0

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5S1sing1.84Å1.81Å
S1C2sing1.84Å1.84Å
C3C2sing1.54Å1.56Å
C25C2sing1.53Å1.51Å
C2C24sing1.53Å1.55Å
N4C3sing1.47Å1.43Å
C3C26sing1.51Å1.62Å
C3H3sing1.09Å1.10Å
N4C5sing1.49Å1.44Å
N4HN4sing1.01Å1.00Å
C6C5sing1.53Å1.54Å
C5H5sing1.09Å1.10Å
C7C6sing1.51Å1.49Å
N8C6sing1.46Å1.44Å
C6H6sing1.09Å1.10Å
O29C7doub1.21Å1.18Å
C7H7sing1.08Å1.08Å
N8C9sing1.35Å1.35Å
N8HN8sing0.97Å1.00Å
C11C9sing1.51Å1.49Å
C9O10doub1.21Å1.21Å
C12C11sing1.53Å1.51Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C13C12sing1.53Å1.51Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C14C13sing1.53Å1.54Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C15C14sing1.53Å1.54Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C16C15sing1.51Å1.51Å
C15N19sing1.47Å1.45Å
C15H15sing1.09Å1.10Å
O17C16doub1.21Å1.21Å
C16O18sing1.34Å1.33Å
O18HO18sing0.97Å0.95Å
N19C20sing1.35Å1.34Å
N19HN19sing0.97Å1.00Å
O21C20doub1.21Å1.21Å
C20C22sing1.51Å1.49Å
C22N23sing1.47Å1.48Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
N23HN23sing1.01Å1.00Å
N23HN2Asing1.01Å1.00Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C24H24Bsing1.09Å1.10Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C25H25Bsing1.09Å1.10Å
C26O28doub1.21Å1.22Å
C26O27sing1.34Å1.26Å
O27HO27sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5S1C294.0°94.9°
S1C5N4104.5°100.9°
S1C5C6117.6°111.2°
S1C5H5106.2°111.1°
S1C2C3109.6°103.5°
S1C2C25111.4°110.6°
S1C2C24109.5°110.6°
C3C2C25115.2°110.8°
C3C2C24101.8°110.6°
C2C3N4103.0°112.9°
C2C3C26128.3°108.8°
C2C3H3105.6°108.8°
C25C2C24108.9°110.5°
C2C25H25109.5°109.4°
C2C25H25A109.5°109.4°
C2C25H25B109.5°109.5°
C2C24H24109.5°109.5°
C2C24H24A109.5°109.5°
C2C24H24B109.5°109.4°
N4C3C26106.7°108.8°
N4C3H3106.9°108.7°
C3N4C5123.9°110.9°
C3N4HN4105.8°111.0°
C26C3H3104.9°108.7°
C3C26O28111.8°120.0°
C3C26O27117.4°120.0°
C5N4HN4105.8°111.0°
N4C5C6108.7°111.1°
N4C5H5110.6°111.1°
C6C5H5109.1°111.1°
C5C6C7105.6°109.5°
C5C6N8117.0°109.4°
C5C6H6108.5°109.5°
C7C6N8106.4°109.5°
C7C6H6109.2°109.5°
C6C7O29128.7°120.0°
C6C7H7115.6°120.0°
N8C6H6109.9°109.5°
C6N8C9118.8°120.0°
C6N8HN8120.6°120.1°
O29C7H7115.6°120.0°
C9N8HN8120.6°119.9°
N8C9C11113.7°120.0°
N8C9O10123.1°120.0°
C11C9O10122.8°120.0°
C9C11C12115.4°109.4°
C9C11H11108.0°109.4°
C9C11H11A108.0°109.5°
C12C11H11108.0°109.5°
C12C11H11A108.0°109.5°
C11C12C13112.8°109.4°
C11C12H12108.6°109.4°
C11C12H12A108.6°109.5°
H11C11H11A109.4°109.5°
C13C12H12108.6°109.5°
C13C12H12A108.6°109.5°
C12C13C14110.9°109.4°
C12C13H13109.1°109.5°
C12C13H13A109.1°109.5°
H12C12H12A109.5°109.5°
C14C13H13109.1°109.5°
C14C13H13A109.1°109.4°
C13C14C15113.1°109.5°
C13C14H14108.5°109.5°
C13C14H14A108.6°109.4°
H13C13H13A109.5°109.5°
C15C14H14108.6°109.4°
C15C14H14A108.5°109.5°
C14C15C16108.3°109.5°
C14C15N19110.3°109.4°
C14C15H15107.3°109.5°
H14C14H14A109.5°109.5°
C16C15N19114.7°109.5°
C16C15H15107.6°109.5°
C15C16O17117.9°120.0°
C15C16O18116.5°120.0°
N19C15H15108.4°109.5°
C15N19C20122.8°120.0°
C15N19HN19118.6°120.1°
O17C16O18125.4°120.0°
C16O18HO18109.5°117.0°
C20N19HN19118.6°120.0°
N19C20O21125.3°120.0°
N19C20C22113.9°120.0°
O21C20C22120.8°119.9°
C20C22N23110.4°109.5°
C20C22H22109.2°109.4°
C20C22H22A109.2°109.4°
N23C22H22109.3°109.5°
N23C22H22A109.3°109.5°
C22N23HN23109.5°111.0°
C22N23HN2A109.5°111.0°
H22C22H22A109.4°109.5°
HN23N23HN2A109.5°111.0°
H24C24H24A109.5°109.5°
H24C24H24B109.5°109.4°
H24AC24H24B109.4°109.4°
H25C25H25A109.5°109.4°
H25C25H25B109.5°109.5°
H25AC25H25B109.4°109.5°
O28C26O27124.2°120.0°
C26O27HO27109.5°117.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5S1C2C313.1°18.3°
C5S1C2C25141.7°137.0°
C5S1C2C2497.8°100.2°
S1C5N4C315.3°42.4°
S1C5N4C6126.3°117.9°
S1C5N4H5113.9°117.9°
S1C5N4HN4106.6°166.4°
S1C5C6H5121.0°124.3°
S1C5C6C7135.4°51.5°
S1C5C6N817.3°68.5°
S1C5C6H6107.6°171.5°
S1C2C3C25126.5°118.6°
S1C2C3C24115.8°118.5°
S1C2C25C24120.8°122.9°
S1C2C3N421.1°3.9°
S1C2C3C26145.1°117.0°
S1C2C3H390.9°124.7°
C2S1C5N40.4°34.6°
C2S1C5C6120.9°152.5°
C2S1C5H5116.6°83.3°
S1C2C24H24180.0°61.4°
S1C2C24H24A60.0°178.5°
S1C2C24H24B60.0°58.5°
S1C2C25H25180.0°58.6°
S1C2C25H25A60.0°178.6°
S1C2C25H25B60.0°61.4°
C3C2C25C24113.6°123.0°
C2C3N4C26137.2°120.9°
C2C3N4H3111.0°120.8°
C2C3C26H3124.3°118.4°
C2C3N4C524.6°31.9°
C2C3N4HN497.4°155.8°
C3C2C24H2464.1°175.5°
C3C2C24H24A55.9°64.4°
C3C2C24H24B175.9°55.5°
C3C2C25H2554.4°55.6°
C3C2C25H25A174.4°64.4°
C3C2C25H25B65.6°175.6°
C2C3C26O2861.8°100.0°
C2C3C26O2791.0°80.0°
C25C2C3N4147.6°114.7°
C25C2C3C2688.4°124.4°
C25C2C3H335.6°6.1°
C25C2C24H2458.0°61.5°
C25C2C24H24A178.0°58.6°
C25C2C24H24B62.0°178.6°
C2C25H25H25A120.0°119.9°
C2C25H25H25B120.0°120.0°
C2C25H25AH25B120.0°120.0°
C24C2C3N494.8°122.4°
C24C2C3C2629.2°1.5°
C24C2C3H3153.3°116.8°
C2C24H24H24A120.0°120.1°
C2C24H24H24B120.0°120.0°
C2C24H24AH24B120.0°120.0°
C24C2C25H2559.2°178.5°
C24C2C25H25A60.9°58.6°
C24C2C25H25B179.2°61.4°
N4C3C26H3113.2°118.2°
C3N4C5HN4122.0°123.9°
C3N4C5C6111.0°160.4°
C3N4C5H5129.2°75.4°
N4C3C26O28175.7°23.4°
N4C3C26O2731.5°156.6°
C26C3N4C5161.7°89.0°
C26C3N4HN439.8°34.9°
C3C26O28O27150.6°180.0°
C3C26O27HO27149.2°179.9°
H3C3N4C586.4°152.7°
H3C3N4HN4151.6°83.4°
H3C3C26O2862.5°141.6°
H3C3C26O27144.6°38.4°
N4C5C6H5120.7°124.2°
N4C5C6C717.1°60.0°
N4C5C6N8101.0°180.0°
N4C5C6H6134.1°60.0°
HN4N4C5C6127.1°75.7°
HN4N4C5H57.3°48.5°
C5C6C7N8125.0°120.0°
C5C6C7H6116.5°120.0°
C5C6N8H6124.2°120.0°
C5C6C7O29104.9°120.0°
C5C6C7H775.1°60.0°
C5C6N8C979.0°155.0°
C5C6N8HN8101.0°25.1°
H5C5C6C7103.6°175.8°
H5C5C6N8138.3°55.8°
H5C5C6H613.4°64.2°
C7C6N8H6118.1°120.0°
C6C7O29H7180.0°180.0°
C7C6N8C9163.3°85.0°
C7C6N8HN816.7°94.9°
N8C6C7O2920.1°0.0°
N8C6C7H7159.9°180.0°
C6N8C9HN8180.0°179.9°
C6N8C9C11169.1°180.0°
C6N8C9O103.2°0.0°
H6C6C7O29138.6°120.0°
H6C6C7H741.4°60.0°
H6C6N8C945.2°35.0°
H6C6N8HN8134.8°145.1°
N8C9C11O10172.3°180.0°
N8C9C11C12130.8°180.0°
N8C9C11H119.9°60.0°
N8C9C11H11A108.4°60.0°
HN8N8C9C1110.9°0.1°
HN8N8C9O10176.8°179.9°
C9C11C12H11120.9°119.9°
C9C11C12H11A120.9°120.0°
C9C11H11H11A117.3°120.0°
C9C11C12C13162.4°180.0°
C9C11C12H1241.9°60.0°
C9C11C12H12A77.1°60.0°
O10C9C11C1256.9°0.0°
O10C9C11H11177.8°120.0°
O10C9C11H11A64.0°120.0°
C12C11H11H11A117.3°120.0°
C11C12C13H12120.5°119.9°
C11C12C13H12A120.5°120.0°
C11C12H12H12A118.5°120.0°
C11C12C13C1453.2°180.0°
C11C12C13H1367.0°60.0°
C11C12C13H13A173.4°60.0°
H11C11C12C1376.7°60.1°
H11C11C12H12162.8°180.0°
H11C11C12H12A43.8°59.9°
H11AC11C12C1341.5°60.0°
H11AC11C12H1278.9°60.0°
H11AC11C12H12A162.0°180.0°
C13C12H12H12A118.5°120.1°
C12C13C14H13120.2°120.0°
C12C13C14H13A120.2°120.0°
C12C13H13H13A119.3°120.1°
C12C13C14C15176.3°180.0°
C12C13C14H1455.7°60.0°
C12C13C14H14A63.2°60.0°
H12C12C13C14173.7°60.0°
H12C12C13H1353.5°180.0°
H12C12C13H13A66.1°59.9°
H12AC12C13C1467.3°60.0°
H12AC12C13H13172.5°60.0°
H12AC12C13H13A53.0°180.0°
C14C13H13H13A119.3°120.0°
C13C14C15H14120.5°120.0°
C13C14C15H14A120.5°120.0°
C13C14H14H14A118.3°120.0°
C13C14C15C16174.3°175.0°
C13C14C15N1959.5°65.0°
C13C14C15H1558.4°55.0°
H13C13C14C1563.5°60.0°
H13C13C14H14175.9°180.0°
H13C13C14H14A57.0°60.0°
H13AC13C14C1556.1°60.0°
H13AC13C14H1464.5°60.0°
H13AC13C14H14A176.6°180.0°
C15C14H14H14A118.3°120.0°
C14C15C16N19123.6°120.0°
C14C15C16H15115.7°120.0°
C14C15N19H15117.2°120.0°
C14C15C16O1779.9°120.0°
C14C15C16O1894.9°60.0°
C14C15N19C20126.5°155.0°
C14C15N19HN1953.5°25.0°
H14C14C15C1653.7°55.0°
H14C14C15N19180.0°175.0°
H14C14C15H1562.2°65.1°
H14AC14C15C1665.2°65.0°
H14AC14C15N1961.1°55.0°
H14AC14C15H15178.9°175.0°
C16C15N19H15120.2°120.0°
C15C16O17O18174.3°179.9°
C15C16O18HO18174.4°180.0°
C16C15N19C20110.9°85.0°
C16C15N19HN1969.1°95.0°
N19C15C16O17156.4°0.0°
N19C15C16O1828.7°179.9°
C15N19C20HN19180.0°180.0°
C15N19C20O210.0°0.0°
C15N19C20C22178.7°180.0°
H15C15C16O1735.8°120.0°
H15C15C16O18149.4°60.1°
H15C15N19C209.3°35.0°
H15C15N19HN19170.7°145.0°
O17C16O18HO180.0°0.1°
N19C20O21C22178.7°180.0°
N19C20C22N23167.9°180.0°
N19C20C22H2247.8°59.9°
N19C20C22H22A71.9°60.0°
HN19N19C20O21180.0°180.0°
HN19N19C20C221.2°0.0°
O21C20C22N2310.9°0.0°
O21C20C22H22131.0°120.1°
O21C20C22H22A109.3°120.0°
C20C22N23H22120.2°120.0°
C20C22N23H22A120.1°120.0°
C20C22H22H22A119.5°119.9°
C20C22N23HN23180.0°56.1°
C20C22N23HN2A60.0°180.0°
N23C22H22H22A119.6°120.0°
C22N23HN23HN2A120.1°123.9°
H22C22N23HN2359.8°64.0°
H22C22N23HN2A179.9°60.0°
H22AC22N23HN2359.9°176.0°
H22AC22N23HN2A60.2°60.1°
H24C24H24AH24B120.0°119.9°
H25C25H25AH25B120.0°120.1°
O28C26O27HO270.0°0.1°

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon