HCV
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C | C1 | sing | 1.53Å | 1.57Å | |
| C | H | sing | 1.09Å | 1.10Å | |
| C | HA | sing | 1.09Å | 1.10Å | |
| C | HB | sing | 1.09Å | 1.10Å | |
| C4 | N | sing | 1.35Å | 1.34Å | |
| N | C3 | sing | 1.47Å | 1.45Å | |
| N | HN | sing | 0.97Å | 1.00Å | |
| O | C4 | doub | 1.21Å | 1.26Å | |
| C7 | S | sing | 1.81Å | 1.81Å | |
| S | HS | sing | 1.35Å | 1.30Å | |
| C1 | C3 | sing | 1.53Å | 1.55Å | |
| C1 | C2 | sing | 1.53Å | 1.53Å | |
| C1 | H1 | sing | 1.09Å | 1.10Å | |
| C5 | N1 | sing | 1.47Å | 1.46Å | |
| N1 | C8 | sing | 1.35Å | 1.34Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| O1 | C8 | doub | 1.21Å | 1.23Å | |
| C2 | H2 | sing | 1.09Å | 1.10Å | |
| C2 | H2A | sing | 1.09Å | 1.10Å | |
| C2 | H2B | sing | 1.09Å | 1.10Å | |
| C12 | N2 | sing | 1.47Å | 1.46Å | |
| N2 | HN2 | sing | 1.01Å | 1.00Å | |
| N2 | HN2A | sing | 1.01Å | 1.00Å | |
| O2 | C13 | doub | 1.21Å | 1.19Å | |
| C3 | C14 | sing | 1.51Å | 1.52Å | |
| C3 | H3 | sing | 1.09Å | 1.10Å | |
| C13 | O3 | sing | 1.34Å | 1.27Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| C4 | C5 | sing | 1.51Å | 1.53Å | |
| C14 | O4 | sing | 1.34Å | 1.23Å | |
| O4 | HO4 | sing | 0.97Å | 0.95Å | |
| C6 | C5 | sing | 1.53Å | 1.52Å | |
| C5 | H5 | sing | 1.09Å | 1.10Å | |
| C14 | O5 | doub | 1.21Å | 1.34Å | |
| C6 | C7 | sing | 1.53Å | 1.55Å | |
| C6 | H6 | sing | 1.09Å | 1.10Å | |
| C6 | H6A | sing | 1.09Å | 1.10Å | |
| C7 | H7 | sing | 1.09Å | 1.10Å | |
| C7 | H7A | sing | 1.09Å | 1.10Å | |
| C8 | C9 | sing | 1.51Å | 1.51Å | |
| C10 | C9 | sing | 1.53Å | 1.52Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C11 | C10 | sing | 1.53Å | 1.56Å | |
| C10 | H10 | sing | 1.09Å | 1.10Å | |
| C10 | H10A | sing | 1.09Å | 1.10Å | |
| C11 | C12 | sing | 1.53Å | 1.50Å | |
| C11 | H11 | sing | 1.09Å | 1.10Å | |
| C11 | H11A | sing | 1.09Å | 1.10Å | |
| C13 | C12 | sing | 1.51Å | 1.55Å | |
| C12 | H12 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C1 | C | H | 109.5° | 109.4° |
| C1 | C | HA | 109.5° | 109.5° |
| C1 | C | HB | 109.5° | 109.5° |
| C | C1 | C3 | 113.2° | 109.5° |
| C | C1 | C2 | 111.8° | 109.5° |
| C | C1 | H1 | 106.5° | 109.4° |
| H | C | HA | 109.4° | 109.4° |
| H | C | HB | 109.4° | 109.5° |
| HA | C | HB | 109.5° | 109.5° |
| C4 | N | C3 | 115.1° | 120.0° |
| C4 | N | HN | 122.5° | 120.1° |
| N | C4 | O | 124.4° | 120.0° |
| N | C4 | C5 | 111.0° | 120.0° |
| C3 | N | HN | 122.5° | 120.0° |
| N | C3 | C1 | 107.8° | 109.4° |
| N | C3 | C14 | 112.7° | 109.4° |
| N | C3 | H3 | 108.6° | 109.5° |
| O | C4 | C5 | 124.0° | 120.0° |
| C7 | S | HS | 102.0° | 103.0° |
| S | C7 | C6 | 113.4° | 109.5° |
| S | C7 | H7 | 108.5° | 109.5° |
| S | C7 | H7A | 108.5° | 109.4° |
| C3 | C1 | C2 | 111.3° | 109.5° |
| C3 | C1 | H1 | 106.8° | 109.5° |
| C1 | C3 | C14 | 112.6° | 109.4° |
| C1 | C3 | H3 | 107.3° | 109.5° |
| C2 | C1 | H1 | 106.9° | 109.4° |
| C1 | C2 | H2 | 109.5° | 109.4° |
| C1 | C2 | H2A | 109.5° | 109.4° |
| C1 | C2 | H2B | 109.5° | 109.5° |
| C5 | N1 | C8 | 124.1° | 120.0° |
| C5 | N1 | HN1 | 118.0° | 120.0° |
| N1 | C5 | C4 | 110.1° | 109.5° |
| N1 | C5 | C6 | 111.1° | 109.5° |
| N1 | C5 | H5 | 106.8° | 109.5° |
| C8 | N1 | HN1 | 117.9° | 120.0° |
| N1 | C8 | O1 | 123.1° | 120.0° |
| N1 | C8 | C9 | 115.8° | 120.0° |
| O1 | C8 | C9 | 121.0° | 120.0° |
| H2 | C2 | H2A | 109.5° | 109.5° |
| H2 | C2 | H2B | 109.4° | 109.5° |
| H2A | C2 | H2B | 109.5° | 109.5° |
| C12 | N2 | HN2 | 109.5° | 111.0° |
| C12 | N2 | HN2A | 109.5° | 110.9° |
| N2 | C12 | C11 | 105.9° | 109.5° |
| N2 | C12 | C13 | 119.0° | 109.5° |
| N2 | C12 | H12 | 110.4° | 109.5° |
| HN2 | N2 | HN2A | 109.5° | 111.1° |
| O2 | C13 | O3 | 123.1° | 119.9° |
| O2 | C13 | C12 | 120.4° | 120.0° |
| C14 | C3 | H3 | 107.6° | 109.5° |
| C3 | C14 | O4 | 117.5° | 120.0° |
| C3 | C14 | O5 | 119.2° | 120.0° |
| C13 | O3 | HO3 | 109.5° | 117.0° |
| O3 | C13 | C12 | 116.3° | 120.1° |
| C4 | C5 | C6 | 116.1° | 109.4° |
| C4 | C5 | H5 | 106.1° | 109.4° |
| C14 | O4 | HO4 | 109.5° | 117.0° |
| O4 | C14 | O5 | 123.3° | 120.0° |
| C6 | C5 | H5 | 106.1° | 109.5° |
| C5 | C6 | C7 | 106.3° | 109.4° |
| C5 | C6 | H6 | 110.3° | 109.5° |
| C5 | C6 | H6A | 110.3° | 109.5° |
| C7 | C6 | H6 | 110.3° | 109.5° |
| C7 | C6 | H6A | 110.2° | 109.5° |
| C6 | C7 | H7 | 108.5° | 109.5° |
| C6 | C7 | H7A | 108.5° | 109.5° |
| H6 | C6 | H6A | 109.5° | 109.5° |
| H7 | C7 | H7A | 109.5° | 109.4° |
| C8 | C9 | C10 | 112.1° | 109.5° |
| C8 | C9 | H9 | 108.8° | 109.5° |
| C8 | C9 | H9A | 108.8° | 109.5° |
| C10 | C9 | H9 | 108.8° | 109.5° |
| C10 | C9 | H9A | 108.8° | 109.5° |
| C9 | C10 | C11 | 114.4° | 109.5° |
| C9 | C10 | H10 | 108.2° | 109.5° |
| C9 | C10 | H10A | 108.2° | 109.4° |
| H9 | C9 | H9A | 109.5° | 109.5° |
| C11 | C10 | H10 | 108.2° | 109.5° |
| C11 | C10 | H10A | 108.2° | 109.4° |
| C10 | C11 | C12 | 102.7° | 109.5° |
| C10 | C11 | H11 | 111.1° | 109.5° |
| C10 | C11 | H11A | 111.1° | 109.5° |
| H10 | C10 | H10A | 109.4° | 109.5° |
| C12 | C11 | H11 | 111.2° | 109.5° |
| C12 | C11 | H11A | 111.1° | 109.5° |
| C11 | C12 | C13 | 101.6° | 109.5° |
| C11 | C12 | H12 | 110.0° | 109.4° |
| H11 | C11 | H11A | 109.5° | 109.5° |
| C13 | C12 | H12 | 109.3° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C1 | C | H | HA | 120.0° | 120.0° |
| C1 | C | H | HB | 120.0° | 120.0° |
| C1 | C | HA | HB | 120.0° | 120.0° |
| C | C1 | C3 | N | 80.1° | 180.0° |
| C | C1 | C3 | C2 | 126.9° | 120.0° |
| C | C1 | C3 | H1 | 116.8° | 120.0° |
| C | C1 | C2 | H1 | 116.1° | 119.9° |
| C | C1 | C2 | H2 | 180.0° | 60.1° |
| C | C1 | C2 | H2A | 60.0° | 180.0° |
| C | C1 | C2 | H2B | 60.0° | 60.0° |
| C | C1 | C3 | C14 | 154.9° | 60.1° |
| C | C1 | C3 | H3 | 36.7° | 60.0° |
| H | C | HA | HB | 119.9° | 120.0° |
| H | C | C1 | C3 | 180.0° | 60.0° |
| H | C | C1 | C2 | 53.3° | 60.0° |
| H | C | C1 | H1 | 63.0° | 179.9° |
| HA | C | C1 | C3 | 60.0° | 180.0° |
| HA | C | C1 | C2 | 173.3° | 59.9° |
| HA | C | C1 | H1 | 57.0° | 60.0° |
| HB | C | C1 | C3 | 60.0° | 60.0° |
| HB | C | C1 | C2 | 66.7° | 180.0° |
| HB | C | C1 | H1 | 177.0° | 60.0° |
| C4 | N | C3 | HN | 180.0° | 179.9° |
| N | C4 | O | C5 | 170.2° | 180.0° |
| C4 | N | C3 | C1 | 32.0° | 155.0° |
| N | C4 | C5 | N1 | 63.9° | 180.0° |
| C4 | N | C3 | C14 | 92.9° | 85.1° |
| C4 | N | C3 | H3 | 148.0° | 35.0° |
| N | C4 | C5 | C6 | 168.8° | 60.0° |
| N | C4 | C5 | H5 | 51.3° | 60.0° |
| C3 | N | C4 | O | 92.7° | 0.0° |
| N | C3 | C1 | C14 | 124.9° | 119.9° |
| N | C3 | C1 | H3 | 116.8° | 120.0° |
| N | C3 | C1 | C2 | 153.0° | 60.0° |
| N | C3 | C1 | H1 | 36.7° | 60.0° |
| N | C3 | C14 | H3 | 119.6° | 120.0° |
| C3 | N | C4 | C5 | 78.6° | 180.0° |
| N | C3 | C14 | O4 | 168.6° | 180.0° |
| N | C3 | C14 | O5 | 11.0° | 0.0° |
| HN | N | C4 | O | 87.3° | 180.0° |
| HN | N | C3 | C1 | 148.0° | 24.9° |
| HN | N | C3 | C14 | 87.1° | 95.0° |
| HN | N | C3 | H3 | 32.0° | 144.9° |
| HN | N | C4 | C5 | 101.3° | 0.0° |
| O | C4 | C5 | N1 | 124.8° | 0.0° |
| O | C4 | C5 | C6 | 2.5° | 120.0° |
| O | C4 | C5 | H5 | 120.1° | 120.0° |
| S | C7 | C6 | C5 | 2.2° | 180.0° |
| S | C7 | C6 | H7 | 120.6° | 120.1° |
| S | C7 | C6 | H7A | 120.6° | 120.0° |
| S | C7 | C6 | H6 | 117.3° | 60.0° |
| S | C7 | C6 | H6A | 121.7° | 60.0° |
| S | C7 | H7 | H7A | 118.2° | 119.9° |
| HS | S | C7 | C6 | 19.8° | 180.0° |
| HS | S | C7 | H7 | 100.8° | 59.9° |
| HS | S | C7 | H7A | 140.4° | 60.0° |
| C3 | C1 | C2 | H1 | 116.2° | 120.1° |
| C3 | C1 | C2 | H2 | 52.3° | 59.9° |
| C3 | C1 | C2 | H2A | 172.3° | 60.0° |
| C3 | C1 | C2 | H2B | 67.7° | 180.0° |
| C1 | C3 | C14 | H3 | 118.1° | 120.0° |
| C1 | C3 | C14 | O4 | 69.2° | 60.1° |
| C1 | C3 | C14 | O5 | 111.3° | 120.0° |
| C1 | C2 | H2 | H2A | 120.0° | 119.9° |
| C1 | C2 | H2 | H2B | 120.0° | 120.1° |
| C1 | C2 | H2A | H2B | 120.0° | 120.0° |
| C2 | C1 | C3 | C14 | 28.0° | 60.0° |
| C2 | C1 | C3 | H3 | 90.3° | 180.0° |
| H1 | C1 | C2 | H2 | 63.9° | NaN° |
| H1 | C1 | C2 | H2A | 56.1° | 60.1° |
| H1 | C1 | C2 | H2B | 176.1° | 59.9° |
| H1 | C1 | C3 | C14 | 88.2° | 180.0° |
| H1 | C1 | C3 | H3 | 153.5° | 60.0° |
| C5 | N1 | C8 | HN1 | 180.0° | 180.0° |
| C5 | N1 | C8 | O1 | 36.0° | 0.3° |
| N1 | C5 | C4 | C6 | 127.3° | 120.0° |
| N1 | C5 | C4 | H5 | 115.1° | 120.0° |
| N1 | C5 | C6 | H5 | 115.7° | 120.0° |
| N1 | C5 | C6 | C7 | 68.7° | 65.0° |
| N1 | C5 | C6 | H6 | 50.8° | 55.0° |
| N1 | C5 | C6 | H6A | 171.8° | 175.0° |
| C5 | N1 | C8 | C9 | 147.3° | 180.0° |
| N1 | C8 | O1 | C9 | 176.5° | 179.7° |
| C8 | N1 | C5 | C4 | 125.8° | 155.0° |
| C8 | N1 | C5 | C6 | 4.3° | 85.0° |
| C8 | N1 | C5 | H5 | 119.5° | 35.0° |
| N1 | C8 | C9 | C10 | 98.9° | 179.7° |
| N1 | C8 | C9 | H9 | 140.7° | 59.8° |
| N1 | C8 | C9 | H9A | 21.5° | 60.3° |
| HN1 | N1 | C8 | O1 | 144.0° | 179.7° |
| HN1 | N1 | C5 | C4 | 54.2° | 25.0° |
| HN1 | N1 | C5 | C6 | 175.7° | 95.0° |
| HN1 | N1 | C5 | H5 | 60.5° | 145.0° |
| HN1 | N1 | C8 | C9 | 32.7° | 0.0° |
| O1 | C8 | C9 | C10 | 77.8° | 0.1° |
| O1 | C8 | C9 | H9 | 42.6° | 119.9° |
| O1 | C8 | C9 | H9A | 161.8° | 120.1° |
| H2 | C2 | H2A | H2B | 119.9° | 120.1° |
| C12 | N2 | HN2 | HN2A | 120.0° | 123.9° |
| N2 | C12 | C13 | O2 | 160.2° | 20.1° |
| N2 | C12 | C13 | O3 | 23.6° | 160.0° |
| N2 | C12 | C11 | C10 | 58.6° | 65.0° |
| N2 | C12 | C11 | C13 | 125.0° | 120.1° |
| N2 | C12 | C11 | H12 | 119.3° | 120.0° |
| N2 | C12 | C11 | H11 | 177.5° | 55.0° |
| N2 | C12 | C11 | H11A | 60.3° | 175.0° |
| N2 | C12 | C13 | H12 | 128.1° | 120.0° |
| HN2 | N2 | C12 | C11 | 180.0° | 176.0° |
| HN2 | N2 | C12 | C13 | 66.5° | 63.9° |
| HN2 | N2 | C12 | H12 | 61.0° | 56.0° |
| HN2A | N2 | C12 | C11 | 60.0° | 60.0° |
| HN2A | N2 | C12 | C13 | 53.4° | 60.1° |
| HN2A | N2 | C12 | H12 | 179.0° | 180.0° |
| O2 | C13 | O3 | C12 | 176.1° | 179.9° |
| O2 | C13 | O3 | HO3 | 0.0° | 0.1° |
| O2 | C13 | C12 | C11 | 84.1° | 100.0° |
| O2 | C13 | C12 | H12 | 32.1° | 140.1° |
| C3 | C14 | O4 | O5 | 179.5° | 180.0° |
| C3 | C14 | O4 | HO4 | 179.5° | 180.0° |
| H3 | C3 | C14 | O4 | 48.9° | 60.0° |
| H3 | C3 | C14 | O5 | 130.6° | 120.0° |
| O3 | C13 | C12 | C11 | 92.1° | 79.9° |
| O3 | C13 | C12 | H12 | 151.7° | 40.0° |
| HO3 | O3 | C13 | C12 | 176.1° | 180.0° |
| C4 | C5 | C6 | H5 | 117.5° | 120.0° |
| C4 | C5 | C6 | C7 | 164.5° | 175.0° |
| C4 | C5 | C6 | H6 | 76.0° | 65.0° |
| C4 | C5 | C6 | H6A | 45.0° | 55.0° |
| HO4 | O4 | C14 | O5 | 0.0° | 0.0° |
| C5 | C6 | C7 | H6 | 119.5° | 120.0° |
| C5 | C6 | C7 | H6A | 119.5° | 120.0° |
| C5 | C6 | H6 | H6A | 121.5° | 120.0° |
| C5 | C6 | C7 | H7 | 118.4° | 59.9° |
| C5 | C6 | C7 | H7A | 122.8° | 60.0° |
| H5 | C5 | C6 | C7 | 47.0° | 55.0° |
| H5 | C5 | C6 | H6 | 166.5° | 175.0° |
| H5 | C5 | C6 | H6A | 72.5° | 65.0° |
| C7 | C6 | H6 | H6A | 121.4° | 120.0° |
| C6 | C7 | H7 | H7A | 118.2° | 120.0° |
| H6 | C6 | C7 | H7 | 122.1° | 179.9° |
| H6 | C6 | C7 | H7A | 3.3° | 60.0° |
| H6A | C6 | C7 | H7 | 1.1° | 60.1° |
| H6A | C6 | C7 | H7A | 117.7° | 180.0° |
| C8 | C9 | C10 | H9 | 120.4° | 120.0° |
| C8 | C9 | C10 | H9A | 120.4° | 120.0° |
| C8 | C9 | H9 | H9A | 118.8° | 120.0° |
| C8 | C9 | C10 | C11 | 73.1° | 180.0° |
| C8 | C9 | C10 | H10 | 166.2° | 59.9° |
| C8 | C9 | C10 | H10A | 47.7° | 60.1° |
| C10 | C9 | H9 | H9A | 118.8° | 120.0° |
| C9 | C10 | C11 | H10 | 120.7° | 120.0° |
| C9 | C10 | C11 | H10A | 120.7° | 119.9° |
| C9 | C10 | H10 | H10A | 117.7° | 120.0° |
| C9 | C10 | C11 | C12 | 141.1° | 180.0° |
| C9 | C10 | C11 | H11 | 100.0° | 60.0° |
| C9 | C10 | C11 | H11A | 22.2° | 60.0° |
| H9 | C9 | C10 | C11 | 47.3° | 60.0° |
| H9 | C9 | C10 | H10 | 73.4° | 180.0° |
| H9 | C9 | C10 | H10A | 168.1° | 60.0° |
| H9A | C9 | C10 | C11 | 166.5° | 60.0° |
| H9A | C9 | C10 | H10 | 45.8° | 60.0° |
| H9A | C9 | C10 | H10A | 72.7° | 180.0° |
| C11 | C10 | H10 | H10A | 117.8° | 120.0° |
| C10 | C11 | C12 | H11 | 118.9° | 120.0° |
| C10 | C11 | C12 | H11A | 118.9° | 120.0° |
| C10 | C11 | H11 | H11A | 123.1° | 120.0° |
| C10 | C11 | C12 | C13 | 176.4° | 175.0° |
| C10 | C11 | C12 | H12 | 60.7° | 55.0° |
| H10 | C10 | C11 | C12 | 20.4° | 60.0° |
| H10 | C10 | C11 | H11 | 139.3° | 60.0° |
| H10 | C10 | C11 | H11A | 98.5° | 179.9° |
| H10A | C10 | C11 | C12 | 98.1° | 60.1° |
| H10A | C10 | C11 | H11 | 20.8° | 180.0° |
| H10A | C10 | C11 | H11A | 143.0° | 59.9° |
| C12 | C11 | H11 | H11A | 123.2° | 120.0° |
| C11 | C12 | C13 | H12 | 116.2° | 120.0° |
| H11 | C11 | C12 | C13 | 57.5° | 65.0° |
| H11 | C11 | C12 | H12 | 58.2° | 175.0° |
| H11A | C11 | C12 | C13 | 64.7° | 55.0° |
| H11A | C11 | C12 | H12 | 179.6° | 65.0° |
