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Obsolete: HAA

HAA was replaced with DHY on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.53Å
C1O1doub1.21Å1.22Å
C1O2sing1.34Å1.23Å
C2C1'sing1.51Å1.50Å
C2H21sing1.09Å1.12Å
C2H22sing1.09Å1.12Å
C1'C2'doub1.38Å1.39ÅAromatic
C1'C6'sing1.38Å1.40ÅAromatic
C2'C3'sing1.39Å1.37ÅAromatic
C2'H2'sing1.08Å1.10Å
C3'O3'sing1.36Å1.38Å
C3'C4'doub1.39Å1.39ÅAromatic
O3'HO3sing0.97Å0.95Å
C4'O4'sing1.36Å1.38Å
C4'C5'sing1.39Å1.38ÅAromatic
O4'HO4sing0.97Å0.95Å
C5'C6'doub1.38Å1.40ÅAromatic
C5'H5'sing1.08Å1.10Å
C6'H6'sing1.08Å1.10Å
O2HO2sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1O1118.1°119.9°
C2C1O2128.0°120.1°
C1C2C1'118.0°109.5°
C1C2H21109.1°109.4°
C1C2H22109.2°109.5°
O1C1O2113.2°120.0°
C1O2HO2128.1°120.0°
C1'C2H21109.1°109.5°
C1'C2H22109.1°109.5°
C2C1'C2'115.3°119.9°
C2C1'C6'125.1°119.9°
H21C2H22101.0°109.4°
C2'C1'C6'119.6°120.2°
C1'C2'C3'120.9°120.0°
C1'C2'H2'120.2°120.1°
C1'C6'C5'119.7°120.1°
C1'C6'H6'120.4°120.0°
C3'C2'H2'118.9°120.0°
C2'C3'O3'130.4°120.1°
C2'C3'C4'119.4°119.8°
O3'C3'C4'110.3°120.1°
C3'O3'HO3130.3°106.9°
C3'C4'O4'110.5°120.1°
C3'C4'C5'121.1°119.9°
O4'C4'C5'128.4°120.1°
C4'O4'HO4110.6°106.9°
C4'C5'C6'119.4°120.0°
C4'C5'H5'119.8°120.1°
C6'C5'H5'120.8°119.9°
C5'C6'H6'119.9°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1O1O2171.0°179.9°
C1C2C1'H21125.3°120.0°
C1C2C1'H22125.3°120.1°
C1C2H21H22114.9°120.0°
C1C2C1'C2'56.7°90.4°
C1C2C1'C6'124.8°90.0°
C2C1O2HO2180.0°179.9°
O1C1C2C1'156.2°0.1°
O1C1C2H2178.6°120.1°
O1C1C2H2230.9°120.0°
O1C1O2HO210.1°0.0°
O2C1C2C1'13.3°180.0°
O2C1C2H21111.9°60.0°
O2C1C2H22138.6°59.9°
C1'C2H21H22114.8°120.0°
C2C1'C2'C6'178.5°179.7°
C2C1'C2'C3'179.9°179.8°
C2C1'C2'H2'0.0°0.2°
C2C1'C6'C5'179.6°180.0°
C2C1'C6'H6'0.4°0.0°
H21C2C1'C2'68.6°149.7°
H21C2C1'C6'109.9°30.0°
H22C2C1'C2'178.0°29.8°
H22C2C1'C6'0.5°149.9°
C1'C2'C3'H2'180.0°179.5°
C1'C2'C3'O3'179.0°179.8°
C1'C2'C3'C4'0.9°0.5°
C2'C1'C6'C5'2.0°0.3°
C2'C1'C6'H6'178.0°179.7°
C6'C1'C2'C3'1.5°0.5°
C6'C1'C2'H2'178.5°179.9°
C1'C6'C5'C4'1.9°0.1°
C1'C6'C5'H6'180.0°180.0°
C1'C6'C5'H5'178.2°180.0°
C2'C3'O3'C4'179.9°179.7°
C2'C3'O3'HO3180.0°89.8°
C2'C3'C4'O4'177.9°179.8°
C2'C3'C4'C5'0.8°0.3°
H2'C2'C3'O3'1.0°0.2°
H2'C2'C3'C4'179.1°180.0°
O3'C3'C4'O4'2.2°0.0°
O3'C3'C4'C5'179.1°180.0°
C4'C3'O3'HO30.1°90.0°
C3'C4'O4'C5'178.5°180.0°
C3'C4'O4'HO4180.0°90.0°
C3'C4'C5'C6'1.3°0.1°
C3'C4'C5'H5'178.7°180.0°
O4'C4'C5'C6'177.1°180.0°
O4'C4'C5'H5'2.9°0.0°
C5'C4'O4'HO41.4°90.0°
C4'C5'C6'H5'180.0°179.9°
C4'C5'C6'H6'178.1°180.0°
H5'C5'C6'H6'1.9°0.0°

226262

PDB entries from 2024-10-16

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