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H9Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O0QC0Kdoub1.22Å1.23Å
C0KN0Msing1.35Å1.36Å
C0KN0Hsing1.35Å1.38Å
C0EC0Dsing1.53Å1.55Å
C0EN0Hsing1.47Å1.48Å
C0DO0Bsing1.43Å1.42Å
N0MC0Nsing1.35Å1.35Å
N0HC0Psing1.37Å1.42Å
F07C01sing1.35Å1.35Å
C00C01doub1.38Å1.41ÅAromatic
C00C05sing1.39Å1.43ÅAromatic
C0NO0Sdoub1.22Å1.23Å
C0NC0Osing1.42Å1.47Å
C0PC0Odoub1.35Å1.36Å
O0BC05sing1.36Å1.38Å
C01C02sing1.39Å1.41ÅAromatic
C05C04doub1.39Å1.42ÅAromatic
C02C03doub1.38Å1.41ÅAromatic
C04C03sing1.39Å1.42ÅAromatic
C04O0Asing1.36Å1.37Å
F13C0Ysing1.35Å1.34Å
C0ZC0Ysing1.41Å1.45ÅAromatic
C0ZC0Cdoub1.36Å1.42ÅAromatic
O0AC0Csing1.36Å1.38Å
C0YC0Xdoub1.35Å1.35ÅAromatic
C0CC0Vsing1.42Å1.43ÅAromatic
C0XN0Wsing1.38Å1.38ÅAromatic
C0VN0Wsing1.38Å1.39ÅAromatic
C0VC10doub1.38Å1.42ÅAromatic
N0WC11sing1.36Å1.38ÅAromatic
C10C14sing1.41Å1.42ÅAromatic
C11C14doub1.38Å1.37ÅAromatic
C14C16sing1.43Å1.45Å
C16N19trip1.14Å1.15Å
C00H1sing1.08Å1.08Å
C02H2sing1.08Å1.08Å
C03H3sing1.08Å1.08Å
C0DH4sing1.09Å1.10Å
C0DH5sing1.09Å1.10Å
C0EH6sing1.09Å1.10Å
C0EH7sing1.09Å1.10Å
C0OH8sing1.08Å1.08Å
C0PH9sing1.08Å1.08Å
C0XH10sing1.08Å1.08Å
C0ZH11sing1.08Å1.08Å
C10H12sing1.08Å1.08Å
C11H13sing1.08Å1.08Å
N0MH14sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O0QC0KN0M119.9°119.5°
O0QC0KN0H124.1°119.6°
N0MC0KN0H116.0°120.9°
C0KN0MC0N128.1°120.2°
C0KN0MH14115.9°119.9°
C0KN0HC0E123.1°119.6°
C0KN0HC0P121.0°120.7°
C0DC0EN0H113.1°109.5°
C0EC0DO0B109.4°109.5°
C0EC0DH4109.5°109.5°
C0EC0DH5109.5°109.5°
C0DC0EH6108.6°109.5°
C0DC0EH7108.6°109.4°
C0EN0HC0P115.9°119.7°
N0HC0EH6108.6°109.5°
N0HC0EH7108.5°109.5°
C0DO0BC05120.0°117.0°
O0BC0DH4109.5°109.5°
O0BC0DH5109.5°109.5°
N0MC0NO0S121.1°120.3°
N0MC0NC0O114.8°119.4°
C0NN0MH14115.9°119.9°
N0HC0PC0O120.6°119.7°
N0HC0PH9119.7°120.1°
F07C01C00119.5°119.9°
F07C01C02120.4°119.9°
C01C00C05120.3°120.0°
C00C01C02120.1°120.1°
C01C00H1119.9°120.0°
C00C05O0B124.5°120.1°
C00C05C04119.0°119.9°
C05C00H1119.8°120.0°
O0SC0NC0O124.1°120.3°
C0NC0OC0P119.5°119.1°
C0NC0OH8120.3°120.5°
C0PC0OH8120.2°120.4°
C0OC0PH9119.7°120.2°
O0BC05C04116.5°120.1°
C01C02C03120.2°120.1°
C01C02H2119.9°119.9°
C05C04C03120.6°119.9°
C05C04O0A119.1°120.0°
C02C03C04119.8°120.0°
C03C02H2119.9°120.0°
C02C03H3120.1°120.0°
C03C04O0A120.3°120.1°
C04C03H3120.1°120.0°
C04O0AC0C122.5°117.9°
F13C0YC0Z119.5°119.7°
F13C0YC0X122.8°119.8°
C0YC0ZC0C121.7°119.7°
C0ZC0YC0X117.8°120.5°
C0YC0ZH11119.2°120.1°
C0ZC0CO0A123.2°120.3°
C0ZC0CC0V119.1°119.3°
C0CC0ZH11119.2°120.2°
O0AC0CC0V117.6°120.4°
C0YC0XN0W120.2°120.8°
C0YC0XH10119.9°119.6°
C0CC0VN0W115.4°119.8°
C0CC0VC10137.3°131.9°
C0XN0WC0V125.8°119.9°
C0XN0WC11125.1°131.3°
N0WC0XH10119.9°119.6°
N0WC0VC10107.3°108.3°
C0VN0WC11109.1°108.8°
C0VC10C14106.3°107.0°
C0VC10H12126.9°126.5°
N0WC11C14108.7°108.6°
N0WC11H13125.6°125.6°
C10C14C11108.7°107.3°
C10C14C16122.0°126.4°
C14C10H12126.9°126.5°
C11C14C16129.3°126.3°
C14C11H13125.7°125.7°
C14C16N19179.6°180.0°
H4C0DH5109.4°109.5°
H6C0EH7109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O0QC0KN0MN0H180.0°179.7°
O0QC0KN0HC0E0.1°0.3°
O0QC0KN0MC0N179.9°179.7°
O0QC0KN0HC0P180.0°179.8°
O0QC0KN0MH140.0°0.3°
N0MC0KN0HC0E179.9°180.0°
C0KN0MC0NH14180.0°180.0°
N0MC0KN0HC0P0.0°0.1°
C0KN0MC0NO0S179.9°179.9°
C0KN0MC0NC0O0.0°0.0°
C0KN0HC0EC0D66.5°90.0°
C0KN0HC0EC0P179.9°180.0°
N0HC0KN0MC0N0.0°0.1°
C0KN0HC0PC0O0.1°0.1°
C0KN0HC0EH6173.0°30.0°
C0KN0HC0EH754.1°150.0°
C0KN0HC0PH9179.9°180.0°
N0HC0KN0MH14180.0°180.0°
C0DC0EN0HH6120.5°120.0°
C0DC0EN0HH7120.6°120.0°
C0EC0DO0BH4120.0°120.0°
C0EC0DO0BH5120.0°120.0°
C0DC0EN0HC0P113.6°90.0°
C0EC0DO0BC05165.0°180.0°
C0EC0DH4H5120.0°120.0°
C0DC0EH6H7118.4°120.0°
N0HC0EC0DO0B69.6°65.0°
C0EN0HC0PC0O180.0°180.0°
N0HC0EC0DH450.4°175.0°
N0HC0EC0DH5170.4°55.0°
N0HC0EH6H7118.3°120.0°
C0EN0HC0PH90.0°0.0°
C0DO0BC05C003.9°0.1°
C0DO0BC05C04176.2°179.9°
O0BC0DH4H5120.0°120.0°
O0BC0DC0EH651.0°175.0°
O0BC0DC0EH7169.9°55.0°
N0MC0NO0SC0O180.0°179.9°
N0MC0NC0OC0P0.0°0.0°
N0MC0NC0OH8180.0°180.0°
N0HC0PC0OC0N0.1°0.0°
N0HC0PC0OH9180.0°180.0°
C0PN0HC0EH67.0°150.0°
C0PN0HC0EH7125.9°30.0°
N0HC0PC0OH8179.9°180.0°
F07C01C00C02180.0°180.0°
F07C01C00C05180.0°180.0°
F07C01C02C03180.0°179.9°
F07C01C00H10.0°0.3°
F07C01C02H20.0°0.1°
C01C00C05H1180.0°179.7°
C01C00C05O0B179.9°180.0°
C01C00C05C040.0°0.0°
C00C01C02C030.0°0.0°
C00C01C02H2180.0°179.9°
C00C05O0BC04179.9°180.0°
C05C00C01C020.0°0.0°
C00C05C04C030.0°0.0°
C00C05C04O0A180.0°180.0°
O0SC0NC0OC0P180.0°180.0°
O0SC0NC0OH80.0°0.0°
O0SC0NN0MH140.0°0.0°
C0NC0OC0PH8180.0°180.0°
C0NC0OC0PH9179.9°180.0°
C0OC0NN0MH14180.0°180.0°
O0BC05C04C03179.9°180.0°
O0BC05C04O0A0.1°0.0°
O0BC05C00H10.1°0.3°
C05O0BC0DH445.1°60.0°
C05O0BC0DH575.0°60.0°
C01C02C03H2180.0°179.9°
C01C02C03C040.0°0.1°
C02C01C00H1180.0°179.7°
C01C02C03H3180.0°180.0°
C05C04C03C020.0°0.1°
C05C04C03O0A180.0°179.9°
C05C04O0AC0C97.4°174.3°
C04C05C00H1180.0°179.7°
C05C04C03H3180.0°180.0°
C02C03C04H3180.0°179.9°
C02C03C04O0A180.0°180.0°
C03C04O0AC0C82.6°5.8°
C04C03C02H2180.0°180.0°
C04O0AC0CC0Z9.0°113.1°
C04O0AC0CC0V171.1°67.2°
O0AC04C03H30.1°0.1°
F13C0YC0ZC0X179.9°180.0°
F13C0YC0ZC0C179.9°180.0°
F13C0YC0XN0W179.9°180.0°
F13C0YC0XH100.0°0.0°
F13C0YC0ZH110.1°0.1°
C0YC0ZC0CH11180.0°180.0°
C0YC0ZC0CO0A180.0°179.7°
C0YC0ZC0CC0V0.0°0.0°
C0ZC0YC0XN0W0.0°0.0°
C0ZC0YC0XH10179.9°180.0°
C0ZC0CO0AC0V180.0°179.7°
C0CC0ZC0YC0X0.0°0.0°
C0ZC0CC0VN0W0.0°0.0°
C0ZC0CC0VC10179.8°180.0°
O0AC0CC0VN0W180.0°179.7°
O0AC0CC0VC100.2°0.3°
O0AC0CC0ZH110.0°0.3°
C0YC0XN0WH10180.0°180.0°
C0YC0XN0WC0V0.1°0.0°
C0YC0XN0WC11179.9°179.9°
C0XC0YC0ZH11180.0°180.0°
C0CC0VN0WC0X0.0°0.1°
C0CC0VN0WC10179.8°180.0°
C0CC0VN0WC11179.9°180.0°
C0CC0VC10C14179.8°180.0°
C0VC0CC0ZH11180.0°179.9°
C0CC0VC10H120.2°0.0°
C0XN0WC0VC11179.8°179.9°
C0XN0WC0VC10179.8°180.0°
C0XN0WC11C14179.8°180.0°
C0XN0WC11H130.2°0.1°
N0WC0VC10C140.0°0.0°
C0VN0WC11C140.0°0.1°
C0VN0WC0XH10179.9°180.0°
N0WC0VC10H12180.0°180.0°
C0VN0WC11H13179.9°180.0°
C10C0VN0WC110.0°0.0°
C0VC10C14H12180.0°180.0°
C0VC10C14C110.0°0.0°
C0VC10C14C16179.9°180.0°
N0WC11C14C100.1°0.1°
N0WC11C14H13180.0°179.9°
N0WC11C14C16179.9°180.0°
C11N0WC0XH100.1°0.1°
C10C14C11C16179.8°180.0°
C10C14C16N19175.2°59.6°
C10C14C11H13179.9°180.0°
C11C14C16N195.0°120.4°
C11C14C10H12180.0°180.0°
C16C14C10H120.1°0.0°
C16C14C11H130.1°0.0°
H2C02C03H30.1°0.1°
H4C0DC0EH6171.0°55.0°
H4C0DC0EH770.1°65.0°
H5C0DC0EH669.0°65.0°
H5C0DC0EH749.9°175.0°
H8C0OC0PH90.1°0.0°

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PDB entries from 2024-07-17

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