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SummaryGeometryRelated PDB entries

H8Z

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CALCAKtrip1.17Å1.18Å
CAKCAJsing1.43Å1.44Å
CAPNAQsing1.47Å1.48Å
CAPCAOsing1.53Å1.50Å
NAICAJdoub1.31Å1.32ÅAromatic
NAINAHsing1.40Å1.19ÅAromatic
OATCASdoub1.22Å1.23Å
CAJC5sing1.46Å1.33ÅAromatic
NAQCASsing1.35Å1.34Å
NAQCARsing1.47Å1.47Å
CASCAUsing1.47Å1.53Å
CARCAMsing1.53Å1.56Å
CANCAOsing1.53Å1.53Å
CANCAMsing1.53Å1.54Å
CAVCAUdoub1.33Å1.53Å
CAMNAHsing1.47Å1.49Å
NAHC4sing1.36Å1.34ÅAromatic
NAGC6sing1.38Å1.33Å
C5C4doub1.41Å1.33ÅAromatic
C5C6sing1.40Å1.34ÅAromatic
C4N3sing1.33Å1.34ÅAromatic
C6N1doub1.33Å1.34ÅAromatic
N3C2doub1.31Å1.40ÅAromatic
N1C2sing1.32Å1.39ÅAromatic
C2H1sing1.08Å1.08Å
CALH2sing1.05Å1.06Å
CAMH3sing1.09Å1.10Å
CANH4sing1.09Å1.10Å
CANH5sing1.09Å1.10Å
CAOH6sing1.09Å1.10Å
CAOH7sing1.09Å1.10Å
CAPH8sing1.09Å1.10Å
CAPH9sing1.09Å1.10Å
CARH10sing1.09Å1.10Å
CARH11sing1.09Å1.10Å
CAUH12sing1.08Å1.08Å
CAVH14sing1.08Å1.08Å
CAVH15sing1.08Å1.08Å
NAGH17sing0.97Å1.00Å
NAGH18sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CALCAKCAJ179.8°179.9°
CAKCALH2180.0°179.9°
CAKCAJNAI124.0°126.4°
CAKCAJC5126.9°126.3°
NAQCAPCAO111.2°108.8°
CAPNAQCAS119.5°120.6°
CAPNAQCAR115.1°118.8°
NAQCAPH8109.1°109.6°
NAQCAPH9109.0°109.6°
CAPCAOCAN112.2°109.3°
CAPCAOH6108.8°109.5°
CAPCAOH7108.8°109.5°
CAOCAPH8109.0°109.6°
CAOCAPH9109.1°109.6°
CAJNAINAH109.3°109.9°
NAICAJC5109.0°107.3°
NAINAHCAM114.3°125.3°
NAINAHC4110.2°109.4°
OATCASNAQ122.4°120.0°
OATCASCAU120.3°120.0°
CAJC5C4104.0°106.4°
CAJC5C6134.3°135.0°
CASNAQCAR123.5°120.6°
NAQCASCAU115.6°120.0°
NAQCARCAM113.1°108.8°
NAQCARH10108.5°109.6°
NAQCARH11108.6°109.6°
CASCAUCAV108.8°120.0°
CASCAUH12125.6°120.0°
CARCAMCAN113.2°109.3°
CARCAMNAH108.4°109.5°
CARCAMH3105.4°109.5°
CAMCARH10108.6°109.6°
CAMCARH11108.6°109.6°
CAOCANCAM106.6°109.5°
CAOCANH4110.2°109.5°
CAOCANH5110.2°109.4°
CANCAOH6108.8°109.5°
CANCAOH7108.8°109.5°
CANCAMNAH117.0°109.5°
CANCAMH3105.7°109.5°
CAMCANH4110.2°109.5°
CAMCANH5110.2°109.4°
CAVCAUH12125.6°120.0°
CAUCAVH14120.0°120.0°
CAUCAVH15120.0°120.0°
CAMNAHC4135.1°125.3°
NAHCAMH3106.2°109.5°
NAHC4C5107.3°106.9°
NAHC4N3132.5°134.5°
NAGC6C5116.8°120.8°
NAGC6N1121.6°120.8°
C6NAGH17109.5°120.0°
C6NAGH18109.5°120.0°
C4C5C6121.8°118.6°
C5C4N3119.9°118.6°
C5C6N1121.5°118.3°
C4N3C2119.6°120.7°
C6N1C2118.2°121.1°
N3C2N1119.0°122.7°
N3C2H1120.5°118.7°
N1C2H1120.5°118.7°
H4CANH5109.5°109.5°
H6CAOH7109.5°109.6°
H8CAPH9109.5°109.7°
H10CARH11109.5°109.6°
H14CAVH15120.0°120.0°
H17NAGH18109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CALCAKCAJNAI8.7°45.0°
CALCAKCAJC5171.4°135.1°
CAKCAJNAIC5180.0°180.0°
CAKCAJNAINAH178.1°180.0°
CAKCAJC5C4178.6°180.0°
CAKCAJC5C60.0°0.0°
CAJCAKCALH2100.9°169.4°
NAQCAPCAOH8120.3°119.8°
NAQCAPCAOH9120.2°119.8°
CAPNAQCASOAT14.8°5.2°
CAPNAQCASCAR163.0°179.9°
CAPNAQCASCAU179.8°174.8°
CAPNAQCARCAM45.7°53.5°
NAQCAPCAOCAN59.7°54.6°
NAQCAPCAOH660.7°174.6°
NAQCAPCAOH7179.8°65.3°
NAQCAPH8H9119.2°120.4°
CAPNAQCARH1074.9°173.3°
CAPNAQCARH11166.2°66.3°
CAOCAPNAQCAS144.1°126.4°
CAOCAPNAQCAR51.6°53.5°
CAPCAOCANH6120.4°120.0°
CAPCAOCANH7120.4°119.9°
CAPCAOCANCAM60.0°61.3°
CAPCAOCANH4179.5°58.7°
CAPCAOCANH559.5°178.7°
CAPCAOH6H7118.8°120.1°
CAOCAPH8H9119.2°120.3°
CAJNAINAHCAM177.4°180.0°
CAJNAINAHC44.4°0.1°
NAICAJC5C41.3°0.0°
NAICAJC5C6180.0°180.0°
NAHNAICAJC52.0°0.1°
NAINAHCAMCAR92.4°59.8°
NAINAHCAMCAN37.1°60.0°
NAINAHCAMC4170.6°179.9°
NAINAHC4C55.3°0.1°
NAINAHC4N3178.7°180.0°
NAINAHCAMH3154.7°179.9°
OATCASNAQCAU165.4°180.0°
OATCASNAQCAR177.8°174.7°
OATCASCAUCAV14.4°4.9°
OATCASCAUH12165.6°175.0°
CAJC5C4NAH3.8°0.0°
CAJC5C6NAG0.1°0.0°
CAJC5C4C6178.9°180.0°
CAJC5C4N3178.1°180.0°
CAJC5C6N1180.0°180.0°
CASNAQCARCAM150.7°126.4°
NAQCASCAUCAV179.9°175.0°
CASNAQCAPH823.8°113.8°
CASNAQCAPH995.7°6.6°
CASNAQCARH1088.8°6.6°
CASNAQCARH1130.2°113.7°
NAQCASCAUH120.1°5.0°
CARNAQCASCAU16.9°5.3°
NAQCARCAMH10120.5°119.8°
NAQCARCAMH11120.6°119.8°
NAQCARCAMCAN47.7°54.6°
NAQCARCAMNAH179.2°174.5°
NAQCARCAMH367.4°65.4°
CARNAQCAPH8171.8°66.3°
CARNAQCAPH968.7°173.3°
NAQCARH10H11118.4°120.3°
CASCAUCAVH12180.0°179.9°
CASCAUCAVH14180.0°0.1°
CASCAUCAVH150.0°180.0°
CARCAMCANCAO53.3°61.4°
CARCAMCANNAH127.2°119.9°
CARCAMCANH3114.9°120.0°
CARCAMNAHH3112.9°120.1°
CARCAMNAHC478.3°120.0°
CARCAMCANH4172.9°58.6°
CARCAMCANH566.2°178.6°
CAMCARH10H11118.3°120.3°
CAOCANCAMH4119.5°120.0°
CAOCANCAMH5119.5°120.0°
CAOCANCAMNAH179.5°178.7°
CAOCANCAMH361.6°58.6°
CAOCANH4H5121.3°120.0°
CANCAOH6H7118.7°120.1°
CANCAOCAPH8180.0°65.2°
CANCAOCAPH960.5°174.4°
CANCAMNAHH3117.6°120.1°
CANCAMNAHC4152.2°120.1°
CAMCANH4H5121.4°120.0°
CAMCANCAOH660.4°178.7°
CAMCANCAOH7179.5°58.5°
CANCAMCARH1072.8°174.4°
CANCAMCARH11168.3°65.3°
CAUCAVH14H15180.0°179.9°
CAMNAHC4C5176.2°179.9°
CAMNAHC4N310.4°0.1°
NAHCAMCANH460.0°61.3°
NAHCAMCANH561.0°58.7°
NAHCAMCARH1058.7°65.6°
NAHCAMCARH1160.2°54.7°
NAHC4C5N3174.4°179.9°
NAHC4C5C6177.3°180.0°
NAHC4N3C2175.6°180.0°
C4NAHCAMH334.6°0.1°
NAGC6C5C4178.6°180.0°
NAGC6C5N1179.9°180.0°
NAGC6N1C2180.0°180.0°
C6NAGH17H18120.0°180.0°
C4C5C6N11.5°0.0°
C5C4N3C22.9°0.1°
C6C5C4N33.0°0.0°
C5C6N1C20.1°0.0°
C5C6NAGH17179.9°0.0°
C5C6NAGH1859.9°180.0°
C4N3C2N11.5°0.1°
C4N3C2H1178.4°180.0°
C6N1C2N30.1°0.0°
C6N1C2H1179.9°180.0°
N1C6NAGH170.0°180.0°
N1C6NAGH18120.0°0.0°
N3C2N1H1180.0°180.0°
H3CAMCANH457.9°178.6°
H3CAMCANH5178.9°61.4°
H3CAMCARH10172.1°54.4°
H3CAMCARH1153.2°174.8°
H4CANCAOH659.1°61.3°
H4CANCAOH760.0°178.6°
H5CANCAOH6179.9°58.7°
H5CANCAOH760.9°61.4°
H6CAOCAPH859.6°54.8°
H6CAOCAPH9179.1°65.6°
H7CAOCAPH859.6°174.9°
H7CAOCAPH959.9°54.5°
H12CAUCAVH140.0°180.0°
H12CAUCAVH15180.0°0.0°

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PDB entries from 2024-07-17

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