Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

H5S

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C5sing1.51Å1.51Å
C1N2sing1.47Å1.49Å
C1C24sing1.53Å1.58Å
C3C4sing1.47Å1.47Å
C3N2sing1.34Å1.36Å
C3O14doub1.22Å1.21Å
C4C5doub1.36Å1.38Å
C4C15sing1.48Å1.50Å
C5O13sing1.34Å1.33Å
C6C7sing1.51Å1.54Å
C6N2sing1.47Å1.47Å
C7C8doub1.38Å1.40ÅAromatic
C7C12sing1.38Å1.40ÅAromatic
C8C9sing1.38Å1.40ÅAromatic
C9C10doub1.38Å1.39ÅAromatic
C9C29sing1.51Å1.51Å
C10C11sing1.39Å1.40ÅAromatic
C10F28sing1.35Å1.36Å
C11C12doub1.38Å1.40ÅAromatic
C15N17doub1.30Å1.30Å
C15C19sing1.47Å1.49Å
S16N17sing1.67Å1.67Å
S16C18sing1.77Å1.77Å
S16O22doub1.42Å1.43Å
S16O23doub1.42Å1.43Å
C18C19doub1.40Å1.41ÅAromatic
C18C30sing1.37Å1.37ÅAromatic
C19C20sing1.40Å1.41ÅAromatic
C20C21doub1.37Å1.39ÅAromatic
C21C31sing1.39Å1.39ÅAromatic
C24C25sing1.53Å1.54Å
C24C26sing1.53Å1.55Å
C24C27sing1.53Å1.54Å
C30C31doub1.38Å1.38ÅAromatic
C30C35sing1.51Å1.50Å
C31C32sing1.51Å1.52Å
C32C33sing1.53Å1.52Å
C33N34sing1.47Å1.48Å
N34C35sing1.47Å1.48Å
N34S36sing1.66Å1.65Å
S36O37doub1.42Å1.43Å
S36O38doub1.42Å1.39Å
S36C39sing1.81Å1.83Å
C1H1sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
C8H8sing1.08Å1.08Å
O13HO13sing0.97Å0.95Å
C11H11sing1.08Å1.08Å
C12H12sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
C21H21sing1.08Å1.08Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C25H25Bsing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C26H26Asing1.09Å1.10Å
C26H26Bsing1.09Å1.10Å
C27H27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
C27H27Bsing1.09Å1.10Å
C29H29sing1.09Å1.10Å
C29H29Asing1.09Å1.10Å
C29H29Bsing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C33H33sing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
C35H35sing1.09Å1.10Å
C35H35Asing1.09Å1.10Å
C39H39sing1.09Å1.10Å
C39H39Asing1.09Å1.10Å
C39H39Bsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5C1N2104.3°106.0°
C5C1C24106.3°110.2°
C1C5C4109.1°106.6°
C1C5O13124.2°126.7°
C5C1H1115.9°110.2°
N2C1C24113.0°110.2°
C1N2C3108.0°108.0°
C1N2C6128.6°126.0°
N2C1H1109.6°110.1°
C1C24C25113.4°109.5°
C1C24C26111.7°109.5°
C1C24C27112.2°109.5°
C24C1H1107.8°110.2°
C4C3N2111.5°110.2°
C4C3O14125.3°124.9°
C3C4C5106.8°109.2°
C3C4C15127.5°125.4°
N2C3O14123.0°124.9°
C3N2C6123.3°126.0°
C5C4C15125.6°125.4°
C4C5O13126.6°126.7°
C4C15N17116.5°120.5°
C4C15C19126.9°120.6°
C5O13HO13109.5°117.0°
C7C6N2104.6°109.5°
C6C7C8121.6°120.0°
C6C7C12121.5°120.0°
C7C6H6111.1°109.5°
C7C6H6A112.1°109.5°
N2C6H6111.1°109.4°
N2C6H6A112.1°109.5°
C8C7C12116.9°120.1°
C7C8C9121.3°120.0°
C7C8H8119.4°120.0°
C7C12C11122.7°120.0°
C7C12H12118.7°120.0°
C8C9C10120.8°120.0°
C8C9C29119.7°120.0°
C9C8H8119.3°119.9°
C10C9C29119.6°120.0°
C9C10C11118.9°119.9°
C9C10F28120.6°120.1°
C9C29H29109.5°109.5°
C9C29H29A109.4°109.4°
C9C29H29B109.5°109.4°
C11C10F28120.6°120.0°
C10C11C12119.5°120.0°
C10C11H11120.3°120.0°
C12C11H11120.2°120.0°
C11C12H12118.7°120.0°
N17C15C19116.1°118.9°
C15N17S16110.0°106.2°
C15C19C18111.3°112.1°
C15C19C20133.8°130.6°
N17S16C1897.3°99.6°
N17S16O22108.9°107.6°
N17S16O23109.5°107.6°
C18S16O22109.5°107.8°
C18S16O23110.6°107.5°
S16C18C19105.2°103.3°
S16C18C30131.8°134.1°
O22S16O23118.8°124.2°
C19C18C30123.0°122.6°
C18C19C20114.9°117.3°
C18C30C31121.1°119.4°
C18C30C35116.4°118.6°
C19C20C21122.3°120.0°
C19C20H20118.8°120.0°
C20C21C31120.2°121.5°
C21C20H20118.8°120.0°
C20C21H21119.9°119.3°
C21C31C30118.5°119.2°
C21C31C32119.2°117.8°
C31C21H21119.9°119.3°
C25C24C26104.9°109.5°
C25C24C27106.4°109.5°
C24C25H25109.5°109.5°
C24C25H25A109.5°109.5°
C24C25H25B109.5°109.5°
C26C24C27107.9°109.5°
C24C26H26109.5°109.5°
C24C26H26A109.5°109.5°
C24C26H26B109.4°109.5°
C24C27H27109.5°109.5°
C24C27H27A109.5°109.5°
C24C27H27B109.5°109.5°
C31C30C35122.5°122.1°
C30C31C32122.2°122.9°
C30C35N34112.5°109.8°
C30C35H35108.5°109.4°
C30C35H35A107.8°109.4°
C31C32C33110.6°110.9°
C31C32H32109.1°109.2°
C31C32H32A108.9°109.2°
C32C33N34110.0°107.9°
C33C32H32109.1°109.2°
C33C32H32A108.8°109.2°
C32C33H33109.3°109.8°
C32C33H33A109.2°109.7°
C33N34C35120.4°117.4°
C33N34S36122.7°121.3°
N34C33H33109.3°109.8°
N34C33H33A109.2°109.8°
C35N34S36116.6°121.3°
N34C35H35108.5°109.4°
N34C35H35A107.8°109.4°
N34S36O37105.0°104.3°
N34S36O38104.6°104.3°
N34S36C3999.4°104.4°
O37S36O38125.5°121.1°
O37S36C39107.7°110.5°
O38S36C39111.2°110.5°
S36C39H39109.5°109.5°
S36C39H39A109.4°109.5°
S36C39H39B109.4°109.5°
H6C6H6A105.8°109.4°
H25C25H25A109.5°109.5°
H25C25H25B109.5°109.4°
H25AC25H25B109.5°109.4°
H26C26H26A109.5°109.4°
H26C26H26B109.5°109.5°
H26AC26H26B109.5°109.4°
H27C27H27A109.5°109.5°
H27C27H27B109.4°109.5°
H27AC27H27B109.5°109.4°
H29C29H29A109.5°109.5°
H29C29H29B109.5°109.5°
H29AC29H29B109.5°109.5°
H32C32H32A110.3°109.2°
H33C33H33A109.9°109.8°
H35C35H35A111.8°109.4°
H39C39H39A109.5°109.4°
H39C39H39B109.5°109.4°
H39AC39H39B109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C5C1N2C24115.0°119.2°
C5C1N2H1124.8°119.1°
C5C1C24H1124.9°121.7°
C1C5C4C34.1°0.0°
C5C1N2C35.5°0.0°
C1C5C4O13176.5°180.0°
C1C5C4C15178.7°180.0°
C5C1N2C6171.0°180.0°
C5C1C24C2546.3°53.9°
C5C1C24C2671.9°174.0°
C5C1C24C27166.8°66.1°
C1C5O13HO13177.2°175.0°
N2C1C24H1121.3°121.7°
C1N2C3C43.3°0.0°
C1N2C3C6176.7°180.0°
C1N2C3O14178.8°180.0°
N2C1C5C45.9°0.0°
N2C1C5O13177.5°180.0°
C1N2C6C777.9°82.8°
N2C1C24C2567.5°170.5°
N2C1C24C26174.3°69.5°
N2C1C24C2753.0°50.5°
C1N2C6H642.1°37.2°
C1N2C6H6A160.3°157.2°
C24C1N2C3109.5°119.2°
C24C1C5C4113.7°119.1°
C24C1C5O1362.9°60.9°
C24C1N2C674.0°60.9°
C1C24C25C26122.1°120.0°
C1C24C25C27123.7°120.0°
C1C24C26C27123.7°120.0°
C1C24C25H257.6°60.0°
C1C24C25H25A127.6°180.0°
C1C24C25H25B112.4°60.0°
C1C24C26H2664.6°85.6°
C1C24C26H26A55.4°154.4°
C1C24C26H26B175.4°34.5°
C1C24C27H27108.9°60.0°
C1C24C27H27A11.1°180.0°
C1C24C27H27B131.2°60.0°
C4C3N2O14175.5°180.0°
C3C4C5C15177.2°180.0°
C3C4C5O13179.4°180.0°
C4C3N2C6173.4°180.0°
C3C4C15N17166.7°105.5°
C3C4C15C195.4°74.3°
N2C3C4C50.5°0.1°
N2C3C4C15177.7°180.0°
C3N2C6C798.1°97.2°
C3N2C1H1130.3°119.1°
C3N2C6H6142.0°142.8°
C3N2C6H6A23.7°22.9°
O14C3C4C5174.8°180.0°
O14C3C4C152.3°0.0°
O14C3N2C62.1°0.0°
C5C4C15N1716.7°74.5°
C5C4C15C19171.3°105.7°
C4C5C1H1126.6°119.1°
C4C5O13HO131.3°5.1°
C15C4C5O132.2°0.0°
C4C15N17C19172.9°179.8°
C4C15N17S16174.4°180.0°
C4C15C19C18171.2°180.0°
C4C15C19C209.3°0.1°
O13C5C1H156.8°60.9°
C7C6N2H6120.0°120.0°
C7C6N2H6A121.8°120.0°
C6C7C8C12179.3°179.7°
C6C7C8C9179.9°180.0°
C6C7C12C11179.2°179.8°
C7C6H6H6A122.0°120.0°
C6C7C8H80.1°0.1°
C6C7C12H120.8°0.0°
N2C6C7C8136.3°90.0°
N2C6C7C1243.0°90.3°
C6N2C1H146.2°60.8°
N2C6H6H6A122.0°120.0°
C7C8C9H8180.0°179.9°
C7C8C9C101.3°0.1°
C7C8C9C29179.0°180.0°
C8C7C12C110.1°0.6°
C8C7C6H616.3°150.0°
C8C7C6H6A101.9°30.0°
C8C7C12H12179.9°179.7°
C12C7C8C90.7°0.3°
C7C12C11C100.3°0.6°
C7C12C11H12180.0°179.7°
C12C7C6H6163.0°29.7°
C12C7C6H6A78.8°149.7°
C12C7C8H8179.3°179.8°
C7C12C11H11179.7°179.7°
C8C9C10C29179.7°180.0°
C8C9C10C111.1°0.1°
C8C9C10F28179.3°180.0°
C8C9C29H2919.4°90.0°
C8C9C29H29A139.3°150.0°
C8C9C29H29B100.6°30.1°
C9C10C11F28179.6°179.9°
C9C10C11C120.3°0.3°
C10C9C8H8178.7°180.0°
C9C10C11H11179.7°180.0°
C10C9C29H29160.3°90.0°
C10C9C29H29A40.3°30.0°
C10C9C29H29B79.7°150.0°
C29C9C10C11179.2°180.0°
C29C9C10F280.4°0.1°
C29C9C8H81.0°0.1°
C9C29H29H29A120.0°120.0°
C9C29H29H29B120.0°120.0°
C9C29H29AH29B120.0°119.9°
C10C11C12H11180.0°179.7°
C10C11C12H12179.7°179.7°
F28C10C11C12180.0°179.8°
F28C10C11H110.1°0.0°
C15N17S16C182.7°0.1°
C15N17S16O22110.9°112.1°
C15N17S16O23117.6°112.0°
N17C15C19C180.8°0.2°
N17C15C19C20178.6°179.9°
C19C15N17S161.5°0.2°
C15C19C18S162.5°0.1°
C15C19C18C20179.6°180.0°
C15C19C18C30179.8°180.0°
C15C19C20C21179.5°179.8°
C15C19C20H200.5°0.3°
N17S16C18O22113.1°112.0°
N17S16C18O23114.1°112.0°
N17S16O22O23126.3°126.7°
N17S16C18C193.0°0.0°
N17S16C18C30179.6°179.9°
C18S16O22O23128.4°126.7°
S16C18C19C30177.6°180.0°
S16C18C19C20177.0°180.0°
S16C18C30C31177.3°179.4°
S16C18C30C353.2°1.3°
O22S16C18C19110.1°112.0°
O22S16C18C3067.2°68.0°
O23S16C18C19117.1°112.0°
O23S16C18C3065.6°68.0°
C18C19C20C211.0°0.3°
C19C18C30C310.3°0.5°
C19C18C30C35179.9°178.8°
C18C19C20H20179.0°179.7°
C30C18C19C200.6°0.0°
C18C30C31C210.8°0.8°
C18C30C31C35179.5°179.3°
C18C30C31C32178.8°178.4°
C18C30C35N34176.5°168.5°
C18C30C35H3563.5°71.5°
C18C30C35H35A57.7°48.4°
C19C20C21H20180.0°180.0°
C19C20C21C310.5°0.0°
C19C20C21H21179.4°180.0°
C20C21C31H21180.0°180.0°
C20C21C31C300.4°0.6°
C20C21C31C32179.3°178.7°
C21C31C30C32179.7°179.2°
C21C31C30C35179.6°178.5°
C21C31C32C33153.2°160.2°
C31C21C20H20179.4°180.0°
C21C31C32H3233.2°79.5°
C21C31C32H32A87.2°39.8°
C25C24C26C27113.1°120.0°
C25C24C1H1171.2°67.8°
C24C25H25H25A120.0°120.0°
C24C25H25H25B120.0°120.0°
C24C25H25AH25B120.0°120.1°
C25C24C26H2658.6°154.4°
C25C24C26H26A178.6°34.4°
C25C24C26H26B61.4°85.6°
C25C24C27H27126.7°60.0°
C25C24C27H27A113.3°60.0°
C25C24C27H27B6.7°180.0°
C26C24C1H153.0°52.2°
C26C24C25H25114.5°60.0°
C26C24C25H25A5.6°60.0°
C26C24C25H25B125.5°180.0°
C24C26H26H26A120.0°120.0°
C24C26H26H26B119.9°120.0°
C24C26H26AH26B120.0°120.0°
C26C24C27H2714.6°180.0°
C26C24C27H27A134.6°60.0°
C26C24C27H27B105.4°60.0°
C27C24C1H168.3°172.2°
C27C24C25H25131.3°180.0°
C27C24C25H25A108.6°60.0°
C27C24C25H25B11.3°60.0°
C27C24C26H26171.7°34.4°
C27C24C26H26A68.3°85.6°
C27C24C26H26B51.7°154.4°
C24C27H27H27A120.0°120.1°
C24C27H27H27B120.0°120.0°
C24C27H27AH27B120.0°120.0°
C30C31C32C3326.4°20.6°
C31C30C35N343.1°12.2°
C30C31C21H21179.6°179.5°
C30C31C32H32146.5°99.7°
C30C31C32H32A93.1°140.9°
C31C30C35H35116.9°107.8°
C31C30C35H35A121.8°132.3°
C35C30C31C320.7°2.3°
C30C35N34C3324.5°44.7°
C30C35N34H35120.0°120.1°
C30C35N34H35A118.7°120.1°
C30C35N34S36161.5°135.3°
C30C35H35H35A118.8°119.9°
C31C32C33H32120.0°120.4°
C31C32C33H32A119.5°120.3°
C31C32C33N3449.2°47.5°
C32C31C21H210.7°1.3°
C31C32H32H32A119.5°119.4°
C31C32C33H3370.7°167.1°
C31C32C33H33A169.0°72.2°
C32C33N34H33120.0°119.6°
C32C33N34H33A119.8°119.6°
C32C33N34C3551.8°64.2°
C32C33N34S36134.6°115.8°
C33C32H32H32A119.5°119.3°
C32C33H33H33A119.8°120.7°
C33N34C35S36174.0°180.0°
C33N34S36O3726.4°153.9°
C33N34S36O38160.1°26.0°
C33N34S36C3984.9°90.0°
N34C33C32H32169.3°72.9°
N34C33C32H32A70.3°167.8°
N34C33H33H33A119.8°120.8°
C33N34C35H35144.5°75.4°
C33N34C35H35A94.2°164.8°
C35N34S36O37159.7°26.1°
C35N34S36O3826.0°154.0°
C35N34S36C3989.0°90.0°
C35N34C33H3368.3°176.2°
C35N34C33H33A171.5°55.4°
N34C35H35H35A118.7°119.8°
N34S36O37O38120.8°116.7°
N34S36O37C39105.3°111.7°
N34S36O38C39106.4°111.7°
S36N34C33H33105.4°3.8°
S36N34C33H33A14.8°124.6°
S36N34C35H3541.5°104.6°
S36N34C35H35A79.8°15.2°
N34S36C39H39148.0°60.0°
N34S36C39H39A92.0°180.0°
N34S36C39H39B28.0°60.0°
O37S36O38C39132.7°131.6°
O37S36C39H3938.9°51.6°
O37S36C39H39A158.9°68.4°
O37S36C39H39B81.1°171.6°
O38S36C39H39102.1°171.6°
O38S36C39H39A17.9°68.4°
O38S36C39H39B137.8°51.6°
S36C39H39H39A120.0°120.0°
S36C39H39H39B120.0°120.0°
S36C39H39AH39B119.9°120.1°
H11C11C12H120.3°0.0°
H20C20C21H210.6°0.0°
H25C25H25AH25B120.0°119.9°
H26C26H26AH26B120.0°120.0°
H27C27H27AH27B120.0°120.0°
H29C29H29AH29B120.0°120.1°
H32C32C33H3349.3°46.7°
H32C32C33H33A70.9°167.5°
H32AC32C33H33169.7°72.5°
H32AC32C33H33A49.5°48.2°
H39C39H39AH39B120.0°119.9°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon