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SummaryGeometryRelated PDB entries

H4V

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
C13O12sing1.45Å1.43Å
O14C11doub1.22Å1.23Å
O12C11sing1.35Å1.41Å
C11C10sing1.48Å1.50Å
I01C02sing2.10Å2.12Å
C15C10doub1.40Å1.38ÅAromatic
C15C16sing1.38Å1.42ÅAromatic
C10C09sing1.40Å1.42ÅAromatic
N03C02doub1.32Å1.34ÅAromatic
N03C04sing1.32Å1.29ÅAromatic
C02C26sing1.38Å1.43ÅAromatic
C16C17doub1.38Å1.39ÅAromatic
N05C04sing1.39Å1.39Å
N05C06sing1.35Å1.42Å
C04N22doub1.32Å1.32ÅAromatic
C26C23doub1.39Å1.39ÅAromatic
O19S08doub1.42Å1.40Å
N07C06sing1.35Å1.39Å
N07S08sing1.66Å1.59Å
C09S08sing1.76Å1.80Å
C09C18doub1.38Å1.41ÅAromatic
C06O21doub1.22Å1.25Å
N22C23sing1.33Å1.37ÅAromatic
S08O20doub1.42Å1.39Å
C23O24sing1.36Å1.41Å
C17C18sing1.38Å1.40ÅAromatic
C25O24sing1.43Å1.41Å
N05H1sing0.97Å1.00Å
N07H2sing0.97Å1.00Å
C13H3sing1.09Å1.10Å
C13H4sing1.09Å1.10Å
C13H5sing1.09Å1.10Å
C15H6sing1.08Å1.08Å
C16H7sing1.08Å1.08Å
C17H8sing1.08Å1.08Å
C18H9sing1.08Å1.08Å
C25H10sing1.09Å1.10Å
C25H11sing1.09Å1.10Å
C25H12sing1.09Å1.10Å
C26H13sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
C13O12C11112.5°117.0°
O12C13H3109.5°109.5°
O12C13H4109.5°109.5°
O12C13H5109.5°109.4°
O14C11O12119.4°119.9°
O14C11C10122.0°120.0°
O12C11C10118.6°120.0°
C11C10C15116.0°120.1°
C11C10C09122.7°120.1°
I01C02N03115.5°120.3°
I01C02C26124.6°120.4°
C10C15C16118.8°119.9°
C15C10C09121.2°119.7°
C10C15H6120.6°120.1°
C15C16C17120.5°120.1°
C16C15H6120.6°120.1°
C15C16H7119.7°119.9°
C10C09S08124.2°120.1°
C10C09C18119.5°119.8°
C02N03C04122.2°120.9°
N03C02C26119.9°119.3°
N03C04N05115.5°119.2°
N03C04N22122.5°121.7°
C02C26C23114.5°118.5°
C02C26H13122.8°120.7°
C16C17C18121.0°120.3°
C17C16H7119.8°120.0°
C16C17H8119.5°119.8°
C04N05C06125.7°120.0°
N05C04N22122.1°119.1°
C04N05H1117.1°120.0°
N05C06N07107.2°120.0°
N05C06O21129.2°120.0°
C06N05H1117.1°120.0°
C04N22C23119.0°120.6°
C26C23N22121.9°119.1°
C26C23O24121.5°120.4°
C23C26H13122.7°120.8°
O19S08N07105.9°106.4°
O19S08C09110.3°106.4°
O19S08O20106.5°123.2°
C06N07S08117.6°120.0°
N07C06O21123.6°120.0°
C06N07H2121.2°120.0°
N07S08C09113.7°107.2°
N07S08O20111.3°106.4°
S08N07H2121.2°120.0°
S08C09C18116.3°120.1°
C09S08O20108.7°106.4°
C09C18C17119.0°120.1°
C09C18H9120.5°119.9°
N22C23O24116.6°120.4°
C23O24C25114.2°117.0°
C18C17H8119.5°119.8°
C17C18H9120.5°120.0°
O24C25H10109.5°109.4°
O24C25H11109.5°109.5°
O24C25H12109.4°109.4°
H3C13H4109.5°109.5°
H3C13H5109.4°109.5°
H4C13H5109.5°109.5°
H10C25H11109.5°109.5°
H10C25H12109.5°109.5°
H11C25H12109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
C13O12C11O142.3°5.1°
C13O12C11C10176.4°174.9°
O12C13H3H4120.0°120.0°
O12C13H3H5120.0°119.9°
O12C13H4H5120.0°120.0°
O14C11O12C10178.7°180.0°
O14C11C10C15112.3°173.8°
O14C11C10C0971.1°6.2°
O12C11C10C1566.4°6.2°
O12C11C10C09110.2°173.8°
C11O12C13H3180.0°55.1°
C11O12C13H460.0°65.0°
C11O12C13H560.0°175.1°
C11C10C15C09176.6°180.0°
C11C10C15C16179.8°179.9°
C11C10C09S081.7°0.0°
C11C10C09C18179.1°179.7°
C11C10C15H60.2°0.0°
I01C02N03C26179.3°179.7°
I01C02N03C04179.2°180.0°
I01C02C26C23178.9°179.8°
I01C02C26H131.1°0.0°
C10C15C16H6180.0°179.9°
C10C15C16C171.8°0.1°
C15C10C09S08178.1°180.0°
C15C10C09C182.7°0.3°
C10C15C16H7178.2°180.0°
C16C15C10C093.2°0.1°
C15C16C17H7180.0°179.9°
C15C16C17C180.1°0.3°
C15C16C17H8179.9°179.9°
C10C09S08O1987.5°175.7°
C10C09S08N0731.4°62.2°
C10C09S08C18179.3°179.7°
C10C09S08O20156.0°51.3°
C10C09C18C170.6°0.5°
C09C10C15H6176.8°180.0°
C10C09C18H9179.3°179.7°
C02N03C04N05179.5°180.0°
C02N03C04N220.7°0.0°
N03C02C26C230.4°0.6°
N03C02C26H13179.7°179.7°
C04N03C02C260.1°0.3°
N03C04N05N22178.8°180.0°
N03C04N05C06178.3°5.2°
N03C04N22C231.2°0.0°
N03C04N05H11.7°174.8°
C02C26C23H13180.0°179.7°
C02C26C23N220.2°0.5°
C02C26C23O24179.5°179.7°
C16C17C18C090.7°0.6°
C16C17C18H8180.0°179.7°
C17C16C15H6178.2°180.0°
C16C17C18H9179.3°179.6°
C04N05C06H1180.0°180.0°
C04N05C06N07179.7°175.0°
C04N05C06O211.8°5.1°
N05C04N22C23179.9°180.0°
C06N05C04N222.9°174.8°
N05C06N07O21178.5°180.0°
N05C06N07S08179.8°175.0°
N05C06N07H20.2°5.0°
C04N22C23C260.9°0.2°
C04N22C23O24178.7°180.0°
N22C04N05H1177.1°5.2°
C26C23N22O24179.7°179.8°
C26C23O24C2514.3°179.7°
O19S08N07C06177.1°48.7°
O19S08N07C09121.3°113.5°
O19S08N07O20115.4°132.9°
O19S08C09O20116.5°133.0°
O19S08C09C1891.8°4.0°
O19S08N07H22.9°131.3°
C06N07S08H2180.0°180.0°
C06N07S08C0955.8°64.9°
C06N07S08O2067.5°178.4°
N07C06N05H10.3°5.0°
N07S08C09O20124.7°113.5°
N07S08C09C18149.4°117.5°
S08N07C06O211.2°5.0°
S08C09C18C17180.0°179.7°
C09S08N07H2124.2°115.2°
S08C09C18H90.0°0.1°
C18C09S08O2024.7°128.9°
C09C18C17H9180.0°179.8°
C09C18C17H8179.3°179.7°
O21C06N05H1178.2°174.9°
O21C06N07H2178.8°175.0°
N22C23O24C25166.1°0.1°
N22C23C26H13179.8°179.7°
O20S08N07H2112.5°1.6°
C23O24C25H10180.0°60.0°
C23O24C25H1160.0°60.0°
C23O24C25H1260.0°180.0°
O24C23C26H130.5°0.0°
C18C17C16H7179.9°179.8°
O24C25H10H11120.0°120.0°
O24C25H10H12120.0°119.9°
O24C25H11H12120.0°120.0°
H3C13H4H5119.9°120.0°
H6C15C16H71.8°0.1°
H7C16C17H80.1°0.0°
H8C17C18H90.7°0.1°
H10C25H11H12120.0°120.0°

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PDB entries from 2024-07-17

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