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H3R

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.49Å
C1C3sing1.39Å1.37ÅAromatic
C1N3doub1.31Å1.34ÅAromatic
C3C12doub1.37Å1.41ÅAromatic
C7C9sing1.38Å1.39ÅAromatic
C7C4doub1.39Å1.40ÅAromatic
C8C10doub1.38Å1.39ÅAromatic
C8C4sing1.39Å1.40ÅAromatic
C9C11doub1.38Å1.38ÅAromatic
C10C11sing1.38Å1.38ÅAromatic
C12N13sing1.36Å1.34ÅAromatic
C12C4sing1.48Å1.48Å
N13N3sing1.40Å1.37ÅAromatic
C2H21Csing1.09Å1.10Å
C2H22Csing1.09Å1.10Å
C2H23Csing1.09Å1.10Å
C3H3sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C9H9sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C10H10sing1.08Å1.08Å
C11H11sing1.08Å1.08Å
N13H13sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C3131.4°125.7°
C2C1N3122.0°125.7°
C1C2H21C109.5°109.5°
C1C2H22C109.5°109.5°
C1C2H23C109.5°109.5°
C3C1N3106.5°108.6°
C1C3C12106.0°107.9°
C1C3H3127.0°126.1°
C1N3N13112.4°108.5°
C3C12N13110.3°107.3°
C3C12C4128.6°126.4°
C12C3H3127.0°126.0°
C9C7C4120.5°119.9°
C7C9C11120.2°120.2°
C9C7H7119.8°120.1°
C7C9H9119.9°119.9°
C7C4C8118.7°119.7°
C7C4C12120.7°120.1°
C4C7H7119.8°120.1°
C10C8C4120.5°119.9°
C8C10C11120.3°120.1°
C10C8H8119.8°120.0°
C8C10H10119.9°120.0°
C8C4C12120.5°120.1°
C4C8H8119.8°120.1°
C9C11C10119.8°120.3°
C11C9H9119.9°120.0°
C9C11H11120.1°119.9°
C11C10H10119.8°119.9°
C10C11H11120.1°119.8°
N13C12C4121.1°126.3°
C12N13N3104.7°107.7°
C12N13H13127.7°126.2°
N3N13H13127.7°126.1°
H21CC2H22C109.5°109.5°
H21CC2H23C109.4°109.4°
H22CC2H23C109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C3N3178.0°179.8°
C2C1C3C12177.2°180.0°
C2C1N3N13177.7°179.9°
C1C2H21CH22C120.0°120.0°
C1C2H21CH23C120.0°120.0°
C1C2H22CH23C120.0°120.0°
C2C1C3H32.8°0.1°
C1C3C12H3180.0°180.0°
C1C3C12N130.9°0.0°
C1C3C12C4176.6°180.0°
C3C1N3N130.5°0.3°
C3C1C2H21C177.7°90.0°
C3C1C2H22C62.3°150.0°
C3C1C2H23C57.7°30.0°
N3C1C3C120.8°0.2°
C1N3N13C120.1°0.3°
N3C1C2H21C0.0°90.3°
N3C1C2H22C120.0°29.7°
N3C1C2H23C120.0°149.7°
N3C1C3H3179.2°179.8°
C1N3N13H13179.9°179.8°
C3C12C4C7154.2°180.0°
C3C12C4C824.3°0.0°
C3C12N13C4177.7°180.0°
C3C12N13N30.6°0.2°
C3C12N13H13179.4°179.9°
C9C7C4H7180.0°179.7°
C9C7C4C80.2°0.0°
C7C9C11H9180.0°179.9°
C7C9C11C100.8°0.0°
C9C7C4C12178.4°180.0°
C7C9C11H11179.2°179.9°
C7C4C8C100.6°0.0°
C7C4C8C12178.6°180.0°
C4C7C9C110.5°0.0°
C7C4C12N1328.5°0.1°
C4C7C9H9179.5°179.9°
C7C4C8H8179.4°179.9°
C10C8C4H8180.0°179.9°
C8C10C11C90.4°0.0°
C8C10C11H10180.0°180.0°
C10C8C4C12178.0°180.0°
C8C10C11H11179.6°179.9°
C4C8C10C110.3°0.0°
C8C4C12N13152.9°179.9°
C8C4C7H7179.8°179.7°
C4C8C10H10179.7°180.0°
C9C11C10H11180.0°179.9°
C11C9C7H7179.5°179.7°
C9C11C10H10179.6°180.0°
C10C11C9H9179.2°179.9°
C11C10C8H8179.7°179.9°
C12N13N3H13180.0°179.9°
N13C12C3H3179.1°180.0°
C4C12N13N3177.1°179.8°
C4C12C3H33.4°0.0°
C12C4C7H71.6°0.3°
C12C4C8H82.0°0.1°
C4C12N13H132.9°0.0°
H21CC2H22CH23C120.0°119.9°
H7C7C9H90.5°0.2°
H9C9C11H110.8°0.1°
H8C8C10H100.3°0.1°
H10C10C11H110.4°0.1°

248335

PDB entries from 2026-01-28

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