H07
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O2P | P | doub | 1.48Å | 1.51Å | |
| O5' | C5' | sing | 1.45Å | 1.43Å | |
| O5' | P | sing | 1.62Å | 1.62Å | |
| C5' | C4' | sing | 1.52Å | 1.52Å | |
| P | O1P | sing | 1.61Å | 1.51Å | |
| P | O3' | sing | 1.63Å | 1.61Å | |
| C4' | O4' | sing | 1.42Å | 1.42Å | |
| C4' | C3' | sing | 1.55Å | 1.51Å | |
| O3' | C3' | sing | 1.43Å | 1.42Å | |
| O4' | C1' | sing | 1.45Å | 1.43Å | |
| C3' | C2' | sing | 1.53Å | 1.52Å | |
| O2' | C2' | sing | 1.43Å | 1.43Å | |
| O2' | C6' | sing | 1.43Å | 1.43Å | |
| C1' | C2' | sing | 1.55Å | 1.53Å | |
| C1' | N9 | sing | 1.46Å | 1.49Å | |
| C14 | C13 | doub | 1.38Å | 1.39Å | Aromatic |
| C14 | C9 | sing | 1.39Å | 1.39Å | Aromatic |
| C13 | C12 | sing | 1.38Å | 1.39Å | Aromatic |
| N9 | C4 | sing | 1.38Å | 1.34Å | Aromatic |
| N9 | C8 | sing | 1.37Å | 1.34Å | Aromatic |
| S2 | C9 | sing | 1.76Å | 1.70Å | |
| S2 | C8 | sing | 1.76Å | 1.75Å | |
| N3 | C4 | doub | 1.33Å | 1.36Å | Aromatic |
| N3 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
| C9 | C10 | doub | 1.39Å | 1.40Å | Aromatic |
| C4 | C5 | sing | 1.40Å | 1.48Å | Aromatic |
| C8 | N7 | doub | 1.31Å | 1.35Å | Aromatic |
| C12 | CL1 | sing | 1.74Å | 1.79Å | |
| C12 | C11 | doub | 1.38Å | 1.40Å | Aromatic |
| C2 | N1 | doub | 1.32Å | 1.35Å | Aromatic |
| C10 | C11 | sing | 1.38Å | 1.39Å | Aromatic |
| N7 | C5 | sing | 1.36Å | 1.35Å | Aromatic |
| C5 | C6 | doub | 1.40Å | 1.48Å | Aromatic |
| N1 | C6 | sing | 1.33Å | 1.35Å | Aromatic |
| C6 | N6 | sing | 1.39Å | 1.35Å | |
| C11 | H1 | sing | 1.08Å | 1.08Å | |
| C10 | H2 | sing | 1.08Å | 1.08Å | |
| C13 | H3 | sing | 1.08Å | 1.08Å | |
| C14 | H4 | sing | 1.08Å | 1.08Å | |
| N6 | H5 | sing | 0.97Å | 1.00Å | |
| N6 | H6 | sing | 0.97Å | 1.00Å | |
| C2 | H7 | sing | 1.08Å | 1.08Å | |
| C1' | H8 | sing | 1.09Å | 1.10Å | |
| C2' | H9 | sing | 1.09Å | 1.10Å | |
| C6' | H10 | sing | 1.09Å | 1.10Å | |
| C6' | H11 | sing | 1.09Å | 1.10Å | |
| C6' | H12 | sing | 1.09Å | 1.10Å | |
| C4' | H13 | sing | 1.09Å | 1.10Å | |
| C3' | H14 | sing | 1.09Å | 1.10Å | |
| C5' | H15 | sing | 1.09Å | 1.10Å | |
| C5' | H16 | sing | 1.09Å | 1.10Å | |
| O1P | H17 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O2P | P | O5' | 109.5° | 110.0° |
| O2P | P | O1P | 118.8° | 110.0° |
| O2P | P | O3' | 108.4° | 110.0° |
| C5' | O5' | P | 121.2° | 120.2° |
| O5' | C5' | C4' | 105.8° | 106.8° |
| O5' | C5' | H15 | 110.4° | 110.0° |
| O5' | C5' | H16 | 110.4° | 110.1° |
| O5' | P | O1P | 107.1° | 110.0° |
| O5' | P | O3' | 103.3° | 106.8° |
| C5' | C4' | O4' | 116.5° | 116.6° |
| C5' | C4' | C3' | 109.6° | 109.0° |
| C5' | C4' | H13 | 108.4° | 108.9° |
| C4' | C5' | H15 | 110.4° | 110.0° |
| C4' | C5' | H16 | 110.4° | 110.0° |
| O1P | P | O3' | 108.6° | 110.0° |
| P | O1P | H17 | 109.5° | 114.0° |
| P | O3' | C3' | 116.4° | 116.6° |
| O4' | C4' | C3' | 103.7° | 102.9° |
| C4' | O4' | C1' | 107.7° | 105.5° |
| O4' | C4' | H13 | 109.8° | 109.5° |
| C4' | C3' | O3' | 107.3° | 106.2° |
| C4' | C3' | C2' | 102.8° | 100.9° |
| C3' | C4' | H13 | 108.6° | 109.5° |
| C4' | C3' | H14 | 109.2° | 111.5° |
| O3' | C3' | C2' | 117.6° | 114.6° |
| O3' | C3' | H14 | 110.4° | 111.7° |
| O4' | C1' | C2' | 107.8° | 107.1° |
| O4' | C1' | N9 | 108.8° | 109.9° |
| O4' | C1' | H8 | 110.0° | 110.0° |
| C3' | C2' | O2' | 111.9° | 110.8° |
| C3' | C2' | C1' | 102.2° | 103.3° |
| C3' | C2' | H9 | 110.3° | 110.6° |
| C2' | C3' | H14 | 109.1° | 111.3° |
| C2' | O2' | C6' | 113.2° | 114.0° |
| O2' | C2' | C1' | 110.2° | 110.7° |
| O2' | C2' | H9 | 111.7° | 110.6° |
| O2' | C6' | H10 | 109.5° | 109.5° |
| O2' | C6' | H11 | 109.5° | 109.5° |
| O2' | C6' | H12 | 109.4° | 109.5° |
| C2' | C1' | N9 | 112.1° | 109.9° |
| C2' | C1' | H8 | 108.8° | 109.9° |
| C1' | C2' | H9 | 110.2° | 110.6° |
| C1' | N9 | C4 | 127.6° | 126.3° |
| C1' | N9 | C8 | 127.6° | 126.3° |
| N9 | C1' | H8 | 109.3° | 109.9° |
| C13 | C14 | C9 | 120.2° | 119.9° |
| C14 | C13 | C12 | 119.7° | 120.1° |
| C14 | C13 | H3 | 120.2° | 120.0° |
| C13 | C14 | H4 | 119.9° | 120.1° |
| C14 | C9 | S2 | 119.9° | 120.1° |
| C14 | C9 | C10 | 120.0° | 119.9° |
| C9 | C14 | H4 | 119.9° | 120.0° |
| C13 | C12 | CL1 | 119.5° | 120.0° |
| C13 | C12 | C11 | 120.3° | 120.1° |
| C12 | C13 | H3 | 120.1° | 119.9° |
| C4 | N9 | C8 | 104.9° | 107.4° |
| N9 | C4 | N3 | 134.8° | 134.8° |
| N9 | C4 | C5 | 106.9° | 106.2° |
| N9 | C8 | S2 | 122.6° | 125.1° |
| N9 | C8 | N7 | 116.7° | 109.8° |
| C9 | S2 | C8 | 106.2° | 100.0° |
| S2 | C9 | C10 | 120.1° | 120.1° |
| S2 | C8 | N7 | 120.7° | 125.1° |
| C4 | N3 | C2 | 121.3° | 120.6° |
| N3 | C4 | C5 | 118.3° | 119.1° |
| N3 | C2 | N1 | 123.4° | 122.4° |
| N3 | C2 | H7 | 118.3° | 118.7° |
| C9 | C10 | C11 | 119.9° | 119.9° |
| C9 | C10 | H2 | 120.0° | 120.1° |
| C4 | C5 | N7 | 107.9° | 107.3° |
| C4 | C5 | C6 | 117.0° | 118.2° |
| C8 | N7 | C5 | 103.6° | 109.4° |
| CL1 | C12 | C11 | 120.2° | 119.9° |
| C12 | C11 | C10 | 119.8° | 120.1° |
| C12 | C11 | H1 | 120.1° | 120.0° |
| C2 | N1 | C6 | 121.9° | 121.2° |
| N1 | C2 | H7 | 118.3° | 118.8° |
| C10 | C11 | H1 | 120.1° | 119.9° |
| C11 | C10 | H2 | 120.0° | 120.1° |
| N7 | C5 | C6 | 135.0° | 134.5° |
| C5 | C6 | N1 | 118.0° | 118.5° |
| C5 | C6 | N6 | 120.7° | 120.7° |
| N1 | C6 | N6 | 121.3° | 120.8° |
| C6 | N6 | H5 | 109.5° | 120.0° |
| C6 | N6 | H6 | 109.5° | 119.9° |
| H5 | N6 | H6 | 109.5° | 120.1° |
| H10 | C6' | H11 | 109.5° | 109.5° |
| H10 | C6' | H12 | 109.5° | 109.4° |
| H11 | C6' | H12 | 109.5° | 109.4° |
| H15 | C5' | H16 | 109.5° | 110.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O2P | P | O5' | C5' | 156.8° | 153.5° |
| O2P | P | O5' | O1P | 130.1° | 121.3° |
| O2P | P | O5' | O3' | 115.3° | 119.4° |
| O2P | P | O1P | O3' | 124.4° | 121.3° |
| O2P | P | O3' | C3' | 160.1° | 157.4° |
| O2P | P | O1P | H17 | 0.0° | 61.3° |
| O5' | C5' | C4' | H15 | 119.4° | 119.3° |
| O5' | C5' | C4' | H16 | 119.4° | 119.4° |
| C5' | O5' | P | O1P | 73.1° | 85.3° |
| C5' | O5' | P | O3' | 41.5° | 34.1° |
| O5' | C5' | C4' | O4' | 178.5° | 176.9° |
| O5' | C5' | C4' | C3' | 64.2° | 67.1° |
| O5' | C5' | C4' | H13 | 54.1° | 52.3° |
| O5' | C5' | H15 | H16 | 121.7° | 121.4° |
| P | O5' | C5' | C4' | 53.1° | 49.8° |
| O5' | P | O1P | O3' | 111.0° | 117.4° |
| O5' | P | O3' | C3' | 44.0° | 38.1° |
| P | O5' | C5' | H15 | 172.6° | 69.5° |
| P | O5' | C5' | H16 | 66.3° | 169.1° |
| O5' | P | O1P | H17 | 124.6° | 60.0° |
| C5' | C4' | O4' | C3' | 120.5° | 119.3° |
| C5' | C4' | O4' | H13 | 123.7° | 124.3° |
| C5' | C4' | C3' | H13 | 118.3° | 119.1° |
| C5' | C4' | C3' | O3' | 70.3° | 72.6° |
| C5' | C4' | O4' | C1' | 154.8° | 162.9° |
| C5' | C4' | C3' | C2' | 165.1° | 167.5° |
| C5' | C4' | C3' | H14 | 49.4° | 49.3° |
| C4' | C5' | H15 | H16 | 121.7° | 121.2° |
| O1P | P | O3' | C3' | 69.5° | 81.3° |
| P | O3' | C3' | C4' | 60.9° | 57.4° |
| P | O3' | C3' | C2' | 176.1° | 167.9° |
| P | O3' | C3' | H14 | 57.9° | 64.3° |
| O3' | P | O1P | H17 | 124.4° | 177.4° |
| O4' | C4' | C3' | H13 | 116.7° | 116.5° |
| O4' | C4' | C3' | O3' | 164.7° | 162.9° |
| O4' | C4' | C3' | C2' | 40.1° | 43.1° |
| C4' | O4' | C1' | C2' | 15.0° | 26.7° |
| C4' | O4' | C1' | N9 | 136.8° | 146.1° |
| C4' | O4' | C1' | H8 | 103.5° | 92.7° |
| O4' | C4' | C3' | H14 | 75.6° | 75.2° |
| O4' | C4' | C5' | H15 | 59.1° | 63.8° |
| O4' | C4' | C5' | H16 | 62.1° | 57.5° |
| C4' | C3' | O3' | C2' | 115.2° | 110.5° |
| C4' | C3' | O3' | H14 | 118.9° | 121.7° |
| C3' | C4' | O4' | C1' | 34.3° | 43.6° |
| C4' | C3' | C2' | H14 | 115.8° | 118.4° |
| C4' | C3' | C2' | O2' | 88.0° | 92.7° |
| C4' | C3' | C2' | C1' | 29.9° | 25.8° |
| C4' | C3' | C2' | H9 | 147.1° | 144.2° |
| C3' | C4' | C5' | H15 | 176.4° | 52.2° |
| C3' | C4' | C5' | H16 | 55.2° | 173.4° |
| O3' | C3' | C2' | H14 | 126.6° | 128.0° |
| O3' | C3' | C2' | O2' | 29.7° | 20.9° |
| O3' | C3' | C2' | C1' | 147.5° | 139.4° |
| O3' | C3' | C2' | H9 | 95.3° | 102.2° |
| O3' | C3' | C4' | H13 | 48.0° | 46.5° |
| O4' | C1' | C2' | C3' | 10.3° | 1.3° |
| O4' | C1' | C2' | O2' | 108.7° | 117.4° |
| O4' | C1' | C2' | N9 | 119.7° | 119.4° |
| O4' | C1' | C2' | H8 | 119.3° | 119.5° |
| O4' | C1' | N9 | H8 | 120.2° | 121.2° |
| O4' | C1' | N9 | C4 | 57.1° | 137.3° |
| O4' | C1' | N9 | C8 | 121.5° | 42.6° |
| O4' | C1' | C2' | H9 | 127.6° | 119.7° |
| C1' | O4' | C4' | H13 | 81.6° | 72.8° |
| C3' | C2' | O2' | C1' | 113.0° | 113.9° |
| C3' | C2' | O2' | H9 | 124.2° | 123.1° |
| C3' | C2' | O2' | C6' | 104.1° | 154.6° |
| C3' | C2' | C1' | H9 | 117.3° | 118.4° |
| C3' | C2' | C1' | N9 | 109.4° | 118.2° |
| C3' | C2' | C1' | H8 | 129.6° | 120.8° |
| C2' | C3' | C4' | H13 | 76.6° | 73.4° |
| O2' | C2' | C1' | H9 | 123.7° | 123.0° |
| O2' | C2' | C1' | N9 | 131.6° | 123.2° |
| O2' | C2' | C1' | H8 | 10.6° | 2.2° |
| C2' | O2' | C6' | H10 | 180.0° | 60.0° |
| C2' | O2' | C6' | H11 | 60.0° | 60.0° |
| C2' | O2' | C6' | H12 | 60.0° | 180.0° |
| O2' | C2' | C3' | H14 | 156.3° | 148.9° |
| C6' | O2' | C2' | C1' | 142.9° | 91.5° |
| C6' | O2' | C2' | H9 | 20.1° | 31.5° |
| O2' | C6' | H10 | H11 | 120.0° | 120.0° |
| O2' | C6' | H10 | H12 | 120.0° | 120.0° |
| O2' | C6' | H11 | H12 | 120.0° | 120.0° |
| C2' | C1' | N9 | H8 | 120.7° | 121.1° |
| C2' | C1' | N9 | C4 | 62.1° | 105.0° |
| C2' | C1' | N9 | C8 | 119.4° | 75.1° |
| C1' | C2' | C3' | H14 | 85.9° | 92.6° |
| C1' | N9 | C4 | C8 | 178.8° | 179.9° |
| C1' | N9 | C8 | S2 | 1.6° | 0.0° |
| C1' | N9 | C4 | N3 | 0.8° | 0.0° |
| C1' | N9 | C4 | C5 | 179.5° | 179.7° |
| C1' | N9 | C8 | N7 | 179.7° | 179.7° |
| N9 | C1' | C2' | H9 | 7.9° | 0.3° |
| C13 | C14 | C9 | H4 | 180.0° | 179.9° |
| C14 | C13 | C12 | H3 | 180.0° | 180.0° |
| C13 | C14 | C9 | S2 | 179.7° | 180.0° |
| C13 | C14 | C9 | C10 | 0.6° | 0.4° |
| C14 | C13 | C12 | CL1 | 179.6° | 180.0° |
| C14 | C13 | C12 | C11 | 0.1° | 0.3° |
| C9 | C14 | C13 | C12 | 0.4° | 0.1° |
| C14 | C9 | S2 | C10 | 179.1° | 179.6° |
| C14 | C9 | S2 | C8 | 122.6° | 85.2° |
| C14 | C9 | C10 | C11 | 0.5° | 0.3° |
| C14 | C9 | C10 | H2 | 179.5° | 179.7° |
| C9 | C14 | C13 | H3 | 179.6° | 179.9° |
| C13 | C12 | CL1 | C11 | 179.7° | 179.7° |
| C13 | C12 | C11 | C10 | 0.0° | 0.4° |
| C13 | C12 | C11 | H1 | 180.0° | 179.8° |
| C12 | C13 | C14 | H4 | 179.6° | 180.0° |
| C4 | N9 | C8 | S2 | 179.6° | 179.9° |
| N9 | C4 | N3 | C5 | 179.7° | 179.6° |
| N9 | C4 | N3 | C2 | 179.7° | 179.7° |
| C4 | N9 | C8 | N7 | 0.9° | 0.4° |
| N9 | C4 | C5 | N7 | 0.3° | 0.3° |
| N9 | C4 | C5 | C6 | 179.7° | 179.7° |
| C4 | N9 | C1' | H8 | 177.2° | 16.1° |
| N9 | C8 | S2 | C9 | 71.5° | 175.2° |
| N9 | C8 | S2 | N7 | 178.6° | 179.7° |
| C8 | N9 | C4 | N3 | 179.6° | 179.9° |
| C8 | N9 | C4 | C5 | 0.7° | 0.4° |
| N9 | C8 | N7 | C5 | 0.8° | 0.2° |
| C8 | N9 | C1' | H8 | 1.3° | 163.8° |
| C9 | S2 | C8 | N7 | 107.1° | 5.1° |
| S2 | C9 | C10 | C11 | 179.6° | 179.9° |
| S2 | C9 | C10 | H2 | 0.4° | 0.1° |
| S2 | C9 | C14 | H4 | 0.3° | 0.1° |
| C8 | S2 | C9 | C10 | 56.6° | 95.2° |
| S2 | C8 | N7 | C5 | 179.4° | 180.0° |
| C4 | N3 | C2 | N1 | 0.0° | 0.1° |
| N3 | C4 | C5 | N7 | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.0° | 0.0° |
| C4 | N3 | C2 | H7 | 180.0° | 179.9° |
| C2 | N3 | C4 | C5 | 0.0° | 0.0° |
| N3 | C2 | N1 | H7 | 180.0° | 179.9° |
| N3 | C2 | N1 | C6 | 0.0° | 0.1° |
| C9 | C10 | C11 | C12 | 0.2° | 0.1° |
| C9 | C10 | C11 | H2 | 180.0° | 180.0° |
| C9 | C10 | C11 | H1 | 179.8° | 179.9° |
| C10 | C9 | C14 | H4 | 179.4° | 179.7° |
| C4 | C5 | N7 | C8 | 0.2° | 0.0° |
| C4 | C5 | N7 | C6 | 180.0° | 180.0° |
| C4 | C5 | C6 | N1 | 0.0° | 0.0° |
| C4 | C5 | C6 | N6 | 179.9° | 180.0° |
| C8 | N7 | C5 | C6 | 179.7° | 180.0° |
| CL1 | C12 | C11 | C10 | 179.7° | 180.0° |
| CL1 | C12 | C11 | H1 | 0.3° | 0.1° |
| CL1 | C12 | C13 | H3 | 0.4° | 0.0° |
| C12 | C11 | C10 | H1 | 180.0° | 179.9° |
| C12 | C11 | C10 | H2 | 179.8° | 179.9° |
| C11 | C12 | C13 | H3 | 179.9° | 179.7° |
| C2 | N1 | C6 | C5 | 0.0° | 0.1° |
| C2 | N1 | C6 | N6 | 180.0° | 180.0° |
| N7 | C5 | C6 | N1 | 179.9° | 180.0° |
| N7 | C5 | C6 | N6 | 0.1° | 0.0° |
| C5 | C6 | N1 | N6 | 180.0° | 180.0° |
| C5 | C6 | N6 | H5 | 179.9° | 0.0° |
| C5 | C6 | N6 | H6 | 59.9° | 180.0° |
| N1 | C6 | N6 | H5 | 0.0° | 179.9° |
| N1 | C6 | N6 | H6 | 120.0° | 0.0° |
| C6 | N1 | C2 | H7 | 180.0° | 180.0° |
| C6 | N6 | H5 | H6 | 120.0° | 180.0° |
| H1 | C11 | C10 | H2 | 0.2° | 0.1° |
| H3 | C13 | C14 | H4 | 0.4° | 0.0° |
| H8 | C1' | C2' | H9 | 113.1° | 120.8° |
| H9 | C2' | C3' | H14 | 31.3° | 25.8° |
| H10 | C6' | H11 | H12 | 120.0° | 119.9° |
| H13 | C4' | C3' | H14 | 167.7° | 168.4° |
| H13 | C4' | C5' | H15 | 65.3° | 171.6° |
| H13 | C4' | C5' | H16 | 173.5° | 67.1° |
