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GYR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
OBGSAJdoub1.42Å1.45Å
SAJOBFdoub1.42Å1.43Å
SAJCAKsing1.76Å1.77Å
SAJCAIsing1.81Å1.79Å
CAKCARsing1.38Å1.38ÅAromatic
CAKCANdoub1.38Å1.38ÅAromatic
CARCAQdoub1.38Å1.38ÅAromatic
CAQCAPsing1.38Å1.37ÅAromatic
CAPCAOdoub1.38Å1.38ÅAromatic
CAOCANsing1.38Å1.38ÅAromatic
CAICABsing1.51Å1.50Å
CABCAAsing1.38Å1.39ÅAromatic
CABCACdoub1.38Å1.40ÅAromatic
CAACAFdoub1.38Å1.39ÅAromatic
CAFCAGsing1.51Å1.51Å
CAFCAEsing1.38Å1.40ÅAromatic
CAECADdoub1.39Å1.39ÅAromatic
CADCACsing1.39Å1.39ÅAromatic
CADOAHsing1.36Å1.38Å
OAHCALsing1.43Å1.45Å
CALCAMsing1.51Å1.51Å
CAMCASsing1.38Å1.38ÅAromatic
CAMCAWdoub1.38Å1.39ÅAromatic
CASCATdoub1.38Å1.39ÅAromatic
CATCAUsing1.38Å1.39ÅAromatic
CAUCAVdoub1.38Å1.38ÅAromatic
CAUCAXsing1.51Å1.52Å
CAVCAWsing1.38Å1.39ÅAromatic
CAXNAYsing1.47Å1.54Å
NAYCAZsing1.47Å1.53Å
NAYCBCsing1.48Å1.52Å
CAZCBDsing1.53Å1.52Å
CAZCBAsing1.54Å1.53Å
CBDOBEsing1.43Å1.43Å
CBACBBsing1.55Å1.49Å
CBBCBCsing1.55Å1.53Å
CAIHAI1sing1.09Å1.10Å
CAIHAI2sing1.09Å1.10Å
CARHARsing1.08Å1.08Å
CANHANsing1.08Å1.08Å
CAQHAQsing1.08Å1.08Å
CAPHAPsing1.08Å1.08Å
CAOHAOsing1.08Å1.08Å
CAAHAAsing1.08Å1.08Å
CACHACsing1.08Å1.08Å
CAGHAG1sing1.09Å1.10Å
CAGHAG2sing1.09Å1.10Å
CAGHAG3sing1.09Å1.10Å
CAEHAEsing1.08Å1.08Å
CALHAL1sing1.09Å1.10Å
CALHAL2sing1.09Å1.10Å
CASHASsing1.08Å1.08Å
CAWHAWsing1.08Å1.08Å
CATHATsing1.08Å1.08Å
CAVHAVsing1.08Å1.08Å
CAXHAX1sing1.09Å1.10Å
CAXHAX2sing1.09Å1.10Å
CAZHAZsing1.09Å1.10Å
CBCHBC1sing1.09Å1.10Å
CBCHBC2sing1.09Å1.10Å
CBDHBD1sing1.09Å1.10Å
CBDHBD2sing1.09Å1.10Å
CBAHBA1sing1.09Å1.10Å
CBAHBA2sing1.09Å1.10Å
OBEHBEsing0.97Å0.95Å
CBBHBB1sing1.09Å1.10Å
CBBHBB2sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OBGSAJOBF119.0°121.0°
OBGSAJCAK107.6°104.2°
OBGSAJCAI107.6°110.5°
OBFSAJCAK108.4°104.3°
OBFSAJCAI108.7°110.6°
CAKSAJCAI104.6°104.4°
SAJCAKCAR119.3°119.9°
SAJCAKCAN119.8°120.0°
SAJCAICAB113.3°109.5°
SAJCAIHAI1108.5°109.4°
SAJCAIHAI2108.5°109.5°
CARCAKCAN120.9°120.0°
CAKCARCAQ119.1°120.0°
CAKCARHAR120.5°120.0°
CAKCANCAO118.9°120.0°
CAKCANHAN120.6°120.0°
CARCAQCAP120.5°120.0°
CAQCARHAR120.5°120.0°
CARCAQHAQ119.8°120.0°
CAQCAPCAO120.0°120.0°
CAPCAQHAQ119.7°120.0°
CAQCAPHAP120.0°120.0°
CAPCAOCAN120.6°120.0°
CAOCAPHAP120.0°120.0°
CAPCAOHAO119.7°120.0°
CAOCANHAN120.5°120.0°
CANCAOHAO119.7°120.0°
CAICABCAA119.6°120.0°
CAICABCAC120.8°119.9°
CABCAIHAI1108.5°109.4°
CABCAIHAI2108.5°109.5°
CAACABCAC119.3°120.1°
CABCAACAF121.6°120.1°
CABCAAHAA119.2°119.9°
CABCACCAD119.7°119.9°
CABCACHAC120.2°120.0°
CAACAFCAG120.5°120.0°
CAACAFCAE118.8°120.1°
CAFCAAHAA119.2°119.9°
CAGCAFCAE120.7°120.0°
CAFCAGHAG1109.5°109.4°
CAFCAGHAG2109.4°109.5°
CAFCAGHAG3109.5°109.5°
CAFCAECAD120.0°119.9°
CAFCAEHAE120.0°120.0°
CAECADCAC120.6°119.9°
CAECADOAH125.6°120.0°
CADCAEHAE120.0°120.0°
CACCADOAH113.7°120.1°
CADCACHAC120.1°120.0°
CADOAHCAL118.9°117.0°
OAHCALCAM110.7°109.5°
OAHCALHAL1109.2°109.5°
OAHCALHAL2109.2°109.5°
CALCAMCAS120.8°120.0°
CALCAMCAW121.3°120.0°
CAMCALHAL1109.2°109.5°
CAMCALHAL2109.1°109.5°
CASCAMCAW117.8°120.0°
CAMCASCAT121.0°120.0°
CAMCASHAS119.5°120.0°
CAMCAWCAV121.2°120.0°
CAMCAWHAW119.4°120.0°
CASCATCAU121.1°120.0°
CATCASHAS119.5°120.0°
CASCATHAT119.4°120.0°
CATCAUCAV117.8°120.0°
CATCAUCAX121.5°120.0°
CAUCATHAT119.4°120.0°
CAVCAUCAX120.7°120.0°
CAUCAVCAW121.0°120.0°
CAUCAVHAV119.5°119.9°
CAUCAXNAY115.6°109.5°
CAUCAXHAX1107.9°109.4°
CAUCAXHAX2107.9°109.5°
CAVCAWHAW119.4°120.0°
CAWCAVHAV119.5°120.0°
CAXNAYCAZ117.6°111.0°
CAXNAYCBC116.2°111.0°
NAYCAXHAX1107.9°109.5°
NAYCAXHAX2107.9°109.5°
CAZNAYCBC103.0°108.6°
NAYCAZCBD112.5°109.9°
NAYCAZCBA109.6°107.2°
NAYCAZHAZ107.8°109.9°
NAYCBCCBB106.3°104.8°
NAYCBCHBC1110.3°110.3°
NAYCBCHBC2110.2°110.4°
CBDCAZCBA110.9°109.9°
CAZCBDOBE112.8°109.4°
CBDCAZHAZ108.0°109.9°
CAZCBDHBD1108.7°109.5°
CAZCBDHBD2108.6°109.5°
CAZCBACBB103.6°103.0°
CBACAZHAZ107.9°110.0°
CAZCBAHBA1110.9°110.7°
CAZCBAHBA2111.0°110.7°
OBECBDHBD1108.6°109.5°
OBECBDHBD2108.6°109.5°
CBDOBEHBE109.5°114.0°
CBACBBCBC104.5°101.7°
CBBCBAHBA1110.9°110.7°
CBBCBAHBA2110.9°110.7°
CBACBBHBB1110.7°111.0°
CBACBBHBB2110.7°111.0°
CBBCBCHBC1110.2°110.4°
CBBCBCHBC2110.3°110.4°
CBCCBBHBB1110.7°111.0°
CBCCBBHBB2110.7°111.0°
HAI1CAIHAI2109.5°109.5°
HAG1CAGHAG2109.4°109.4°
HAG1CAGHAG3109.5°109.5°
HAG2CAGHAG3109.5°109.5°
HAL1CALHAL2109.5°109.4°
HAX1CAXHAX2109.4°109.4°
HBC1CBCHBC2109.5°110.4°
HBD1CBDHBD2109.5°109.5°
HBA1CBAHBA2109.5°110.8°
HBB1CBBHBB2109.4°110.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OBGSAJOBFCAK123.2°116.7°
OBGSAJOBFCAI123.7°131.5°
OBGSAJCAKCAI114.2°116.0°
OBGSAJCAKCAR31.0°154.0°
OBGSAJCAKCAN147.4°25.8°
OBGSAJCAICAB162.8°68.4°
OBGSAJCAIHAI142.3°171.6°
OBGSAJCAIHAI276.6°51.6°
OBFSAJCAKCAI115.9°116.1°
OBFSAJCAKCAR160.9°26.1°
OBFSAJCAKCAN17.5°153.6°
OBFSAJCAICAB32.6°68.4°
OBFSAJCAIHAI187.9°51.6°
OBFSAJCAIHAI2153.2°171.6°
SAJCAKCARCAN178.3°179.7°
SAJCAKCARCAQ178.0°180.0°
SAJCAKCANCAO178.5°179.8°
CAKSAJCAICAB83.0°180.0°
CAKSAJCAIHAI1156.5°60.0°
CAKSAJCAIHAI237.6°60.0°
SAJCAKCARHAR2.0°0.0°
SAJCAKCANHAN1.5°0.0°
CAISAJCAKCAR83.3°90.0°
CAISAJCAKCAN98.4°90.3°
SAJCAICABHAI1120.6°120.0°
SAJCAICABHAI2120.6°120.0°
SAJCAICABCAA84.0°89.9°
SAJCAICABCAC103.1°90.2°
SAJCAIHAI1HAI2118.3°120.0°
CAKCARCAQHAR180.0°180.0°
CAKCARCAQCAP0.9°0.1°
CARCAKCANCAO0.2°0.5°
CARCAKCANHAN179.8°179.7°
CAKCARCAQHAQ179.1°179.9°
CANCAKCARCAQ0.3°0.2°
CAKCANCAOCAP0.1°0.4°
CAKCANCAOHAN180.0°179.8°
CANCAKCARHAR179.7°179.7°
CAKCANCAOHAO179.9°179.7°
CARCAQCAPHAQ180.0°179.9°
CARCAQCAPCAO1.0°0.1°
CARCAQCAPHAP179.0°180.0°
CAQCAPCAOHAP180.0°179.9°
CAQCAPCAOCAN0.5°0.1°
CAPCAQCARHAR179.1°180.0°
CAQCAPCAOHAO179.5°180.0°
CAPCAOCANHAO180.0°179.9°
CAPCAOCANHAN179.9°179.8°
CAOCAPCAQHAQ179.0°180.0°
CANCAOCAPHAP179.5°179.8°
CAICABCAACAC173.0°179.8°
CAICABCAACAF171.2°180.0°
CAICABCACCAD169.5°179.8°
CABCAIHAI1HAI2118.3°120.0°
CAICABCAAHAA8.8°0.1°
CAICABCACHAC10.5°0.1°
CABCAACAFHAA180.0°179.9°
CABCAACAFCAG178.5°180.0°
CABCAACAFCAE0.1°0.1°
CAACABCACCAD3.4°0.4°
CAACABCAIHAI136.6°30.0°
CAACABCAIHAI2155.5°150.1°
CAACABCACHAC176.6°179.8°
CACCABCAACAF1.8°0.2°
CABCACCADCAE3.2°0.4°
CABCACCADHAC180.0°179.9°
CABCACCADOAH173.6°179.8°
CACCABCAIHAI1136.3°149.8°
CACCABCAIHAI217.4°29.8°
CACCABCAAHAA178.2°179.8°
CAACAFCAGCAE178.4°179.9°
CAACAFCAECAD0.4°0.1°
CAACAFCAGHAG189.2°90.1°
CAACAFCAGHAG2150.8°150.0°
CAACAFCAGHAG330.8°29.9°
CAACAFCAEHAE179.7°180.0°
CAGCAFCAECAD178.8°180.0°
CAGCAFCAAHAA1.5°0.1°
CAFCAGHAG1HAG2120.0°120.0°
CAFCAGHAG1HAG3120.0°120.1°
CAFCAGHAG2HAG3120.0°120.1°
CAGCAFCAEHAE1.3°0.1°
CAFCAECADHAE180.0°179.9°
CAFCAECADCAC1.3°0.1°
CAFCAECADOAH175.1°180.0°
CAECAFCAAHAA179.9°180.0°
CAECAFCAGHAG189.2°90.0°
CAECAFCAGHAG230.8°29.9°
CAECAFCAGHAG3150.8°150.0°
CAECADCACOAH176.8°179.8°
CAECADOAHCAL0.1°0.0°
CAECADCACHAC176.8°179.8°
CACCADOAHCAL176.7°179.8°
CACCADCAEHAE178.7°179.8°
CADOAHCALCAM171.7°180.0°
OAHCADCACHAC6.4°0.1°
OAHCADCAEHAE4.9°0.0°
CADOAHCALHAL168.2°60.0°
CADOAHCALHAL251.5°60.0°
OAHCALCAMHAL1120.2°120.1°
OAHCALCAMHAL2120.2°120.0°
OAHCALCAMCAS143.9°90.0°
OAHCALCAMCAW32.1°90.3°
OAHCALHAL1HAL2119.5°120.0°
CALCAMCASCAW176.1°179.7°
CALCAMCASCAT174.3°180.0°
CALCAMCAWCAV175.2°179.8°
CAMCALHAL1HAL2119.4°119.9°
CALCAMCASHAS5.7°0.1°
CALCAMCAWHAW4.8°0.0°
CAMCASCATHAS180.0°179.9°
CAMCASCATCAU1.5°0.0°
CASCAMCAWCAV0.8°0.5°
CASCAMCALHAL123.7°30.0°
CASCAMCALHAL296.0°150.0°
CASCAMCAWHAW179.1°179.7°
CAMCASCATHAT178.5°179.9°
CAWCAMCASCAT1.8°0.3°
CAMCAWCAVCAU0.5°0.4°
CAMCAWCAVHAW180.0°179.8°
CAWCAMCALHAL1152.3°149.7°
CAWCAMCALHAL288.1°29.7°
CAWCAMCASHAS178.2°179.8°
CAMCAWCAVHAV179.5°179.7°
CASCATCAUHAT180.0°180.0°
CASCATCAUCAV0.1°0.1°
CASCATCAUCAX179.2°180.0°
CATCAUCAVCAX179.3°179.9°
CATCAUCAVCAW0.8°0.1°
CATCAUCAXNAY56.5°89.9°
CAUCATCASHAS178.5°179.9°
CATCAUCAVHAV179.1°180.0°
CATCAUCAXHAX164.4°150.0°
CATCAUCAXHAX2177.4°30.1°
CAUCAVCAWHAV180.0°179.9°
CAVCAUCAXNAY124.2°89.9°
CAUCAVCAWHAW179.5°179.8°
CAVCAUCATHAT179.9°179.9°
CAVCAUCAXHAX1114.9°30.1°
CAVCAUCAXHAX23.3°150.0°
CAXCAUCAVCAW179.9°179.8°
CAUCAXNAYHAX1120.9°120.0°
CAUCAXNAYHAX2120.9°120.0°
CAUCAXNAYCAZ70.0°170.0°
CAUCAXNAYCBC167.4°69.2°
CAXCAUCATHAT0.8°0.0°
CAXCAUCAVHAV0.2°0.1°
CAUCAXHAX1HAX2117.2°119.9°
CAXNAYCAZCBC129.1°122.2°
CAXNAYCAZCBD110.4°119.3°
CAXNAYCAZCBA125.8°121.2°
CAXNAYCBCCBB106.1°98.2°
NAYCAXHAX1HAX2117.2°120.0°
CAXNAYCAZHAZ8.6°1.7°
CAXNAYCBCHBC1134.5°143.0°
CAXNAYCBCHBC213.4°20.7°
NAYCAZCBDCBA123.1°117.8°
NAYCAZCBDHAZ118.9°121.1°
NAYCAZCBAHAZ117.1°119.5°
NAYCAZCBDOBE65.2°65.0°
NAYCAZCBACBB18.7°22.3°
CAZNAYCBCCBB23.9°24.1°
CAZNAYCAXHAX1169.1°70.0°
CAZNAYCAXHAX250.9°50.0°
CAZNAYCBCHBC195.5°94.8°
CAZNAYCBCHBC2143.4°142.9°
NAYCAZCBDHBD1174.3°175.0°
NAYCAZCBDHBD255.3°55.0°
NAYCAZCBAHBA1137.8°140.7°
NAYCAZCBAHBA2100.3°96.1°
CBCNAYCAZCBD120.4°118.5°
CBCNAYCAZCBA3.4°1.0°
NAYCBCCBBCBA36.7°37.1°
NAYCBCCBBHBC1119.5°118.8°
NAYCBCCBBHBC2119.5°118.9°
CBCNAYCAXHAX146.5°50.8°
CBCNAYCAXHAX271.7°170.8°
CBCNAYCAZHAZ120.6°120.5°
NAYCBCHBC1HBC2121.5°122.3°
NAYCBCCBBHBB182.6°81.1°
NAYCBCCBBHBB2155.9°155.1°
CBDCAZCBAHAZ118.1°121.1°
CAZCBDOBEHBD1120.5°120.0°
CAZCBDOBEHBD2120.5°120.0°
CBDCAZCBACBB143.5°141.7°
CAZCBDHBD1HBD2118.5°120.0°
CBDCAZCBAHBA197.5°99.9°
CBDCAZCBAHBA224.4°23.3°
CAZCBDOBEHBE180.0°180.0°
CBACAZCBDOBE57.9°52.8°
CAZCBACBBHBA1119.0°118.4°
CAZCBACBBHBA2119.1°118.4°
CAZCBACBBCBC33.1°35.6°
CBACAZCBDHBD162.6°67.2°
CBACAZCBDHBD2178.4°172.8°
CAZCBAHBA1HBA2122.8°123.2°
CAZCBACBBHBB186.2°82.5°
CAZCBACBBHBB2152.3°153.7°
OBECBDCAZHAZ175.9°173.9°
OBECBDHBD1HBD2118.4°120.0°
CBACBBCBCHBB1119.2°118.1°
CBACBBCBCHBB2119.2°118.1°
CBBCBACAZHAZ98.4°97.2°
CBACBBCBCHBC182.8°81.8°
CBACBBCBCHBC2156.2°155.9°
CBBCBAHBA1HBA2122.7°123.2°
CBACBBHBB1HBB2122.3°123.9°
CBBCBCHBC1HBC2121.5°122.3°
CBCCBBCBAHBA1152.1°154.0°
CBCCBBCBAHBA286.0°82.7°
CBCCBBHBB1HBB2122.3°123.8°
HARCARCAQHAQ0.9°0.1°
HANCANCAOHAO0.1°0.1°
HAQCAQCAPHAP1.0°0.1°
HAPCAPCAOHAO0.5°0.1°
HAG1CAGHAG2HAG3120.0°120.0°
HASCASCATHAT1.5°0.0°
HAWCAWCAVHAV0.5°0.1°
HAZCAZCBDHBD155.4°53.9°
HAZCAZCBDHBD263.6°66.1°
HAZCAZCBAHBA120.6°21.2°
HAZCAZCBAHBA2142.5°144.4°
HBC1CBCCBBHBB1158.0°160.1°
HBC1CBCCBBHBB236.4°36.3°
HBC2CBCCBBHBB136.9°37.8°
HBC2CBCCBBHBB284.6°86.0°
HBD1CBDOBEHBE59.5°60.0°
HBD2CBDOBEHBE59.5°60.0°
HBA1CBACBBHBB132.9°35.9°
HBA1CBACBBHBB288.7°87.9°
HBA2CBACBBHBB1154.8°159.2°
HBA2CBACBBHBB233.2°35.4°

223790

PDB entries from 2024-08-14

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