Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

GYI

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C02C01sing1.53Å1.54Å
C03C02sing1.51Å1.51Å
N04C03doub1.33Å1.34ÅAromatic
C05N04sing1.32Å1.33ÅAromatic
N06C05sing1.39Å1.36Å
N07C05doub1.32Å1.34ÅAromatic
C08N07sing1.33Å1.33ÅAromatic
N09C08sing1.39Å1.35Å
C10C08doub1.40Å1.40ÅAromatic
O11C10sing1.36Å1.39Å
C12O11sing1.43Å1.46Å
C13C12sing1.53Å1.52Å
C14C13sing1.53Å1.53Å
O15C14sing1.43Å1.44Å
C16O15sing1.36Å1.37Å
C17C16doub1.39Å1.41ÅAromatic
C19C18sing1.53Å1.53Å
C20C19sing1.51Å1.51Å
O21C20doub1.21Å1.21Å
N22C20sing1.35Å1.40Å
S23N22sing1.66Å1.72Å
O24S23doub1.42Å1.58Å
O25S23doub1.42Å1.58Å
C26S23sing1.82Å1.85Å
C27C26sing1.53Å1.53Å
C28C26sing1.53Å1.52Å
C18C17sing1.51Å1.52Å
C29C17sing1.38Å1.38ÅAromatic
C30C29doub1.38Å1.39ÅAromatic
C31C30sing1.38Å1.38ÅAromatic
C32C31doub1.38Å1.39ÅAromatic
C03C10sing1.38Å1.36ÅAromatic
C16C32sing1.39Å1.38ÅAromatic
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C13H131sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C14H141sing1.09Å1.10Å
C18H181sing1.09Å1.10Å
C18H182sing1.09Å1.10Å
C26H261sing1.09Å1.10Å
C29H291sing1.08Å1.08Å
C30H301sing1.08Å1.08Å
C31H311sing1.08Å1.08Å
C32H321sing1.08Å1.08Å
C01H012sing1.09Å1.10Å
C01H011sing1.09Å1.10Å
C01H013sing1.09Å1.10Å
C02H021sing1.09Å1.10Å
C02H022sing1.09Å1.10Å
N06H062sing0.97Å1.00Å
N06H061sing0.97Å1.00Å
N09H092sing0.97Å1.00Å
N09H091sing0.97Å1.00Å
C19H191sing1.09Å1.10Å
C19H192sing1.09Å1.10Å
N22H221sing0.97Å1.00Å
C27H272sing1.09Å1.10Å
C27H271sing1.09Å1.10Å
C27H273sing1.09Å1.10Å
C28H283sing1.09Å1.10Å
C28H281sing1.09Å1.10Å
C28H282sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C01C02C03108.3°109.5°
C02C01H012109.5°109.4°
C02C01H011109.5°109.4°
C02C01H013109.4°109.5°
C01C02H021109.8°109.5°
C01C02H022109.8°109.4°
C02C03N04116.6°120.4°
C02C03C10122.5°120.3°
C03C02H021109.8°109.5°
C03C02H022109.8°109.4°
C03N04C05119.3°121.0°
N04C03C10120.9°119.2°
N04C05N06117.7°119.1°
N04C05N07123.4°121.7°
N06C05N07118.9°119.1°
C05N06H062109.5°120.0°
C05N06H061109.5°120.0°
C05N07C08117.6°120.7°
N07C08N09120.2°120.5°
N07C08C10121.8°119.0°
N09C08C10118.0°120.5°
C08N09H092109.5°120.0°
C08N09H091109.5°120.1°
C08C10O11117.3°120.8°
C08C10C03117.0°118.4°
C10O11C12119.3°117.0°
O11C10C03125.6°120.8°
O11C12C13109.1°109.4°
O11C12H121109.6°109.4°
O11C12H122109.5°109.5°
C12C13C14112.1°109.5°
C13C12H121109.5°109.5°
C13C12H122109.6°109.5°
C12C13H132108.8°109.5°
C12C13H131108.8°109.5°
C13C14O15103.7°109.5°
C14C13H132108.8°109.5°
C14C13H131108.8°109.5°
C13C14H142110.9°109.5°
C13C14H141110.9°109.5°
C14O15C16123.0°117.0°
O15C14H142110.9°109.5°
O15C14H141110.9°109.4°
O15C16C17115.8°120.1°
O15C16C32123.5°120.1°
C16C17C18118.2°120.0°
C16C17C29118.3°120.0°
C17C16C32120.6°119.9°
C18C19C20112.0°109.5°
C19C18C17115.5°109.5°
C19C18H181107.9°109.5°
C19C18H182108.0°109.5°
C18C19H191108.8°109.5°
C18C19H192108.8°109.5°
C19C20O21125.6°120.0°
C19C20N22111.6°120.1°
C20C19H191108.8°109.4°
C20C19H192108.8°109.5°
O21C20N22122.8°119.9°
C20N22S23126.1°120.1°
C20N22H221116.9°120.0°
N22S23O24110.1°104.2°
N22S23O25108.8°104.3°
N22S23C26105.6°104.4°
S23N22H221117.0°120.0°
O24S23O25118.9°121.1°
O24S23C26106.3°110.5°
O25S23C26106.3°110.6°
S23C26C27111.8°109.4°
S23C26C28112.3°109.4°
S23C26H261103.0°109.5°
C27C26C28116.7°109.5°
C27C26H261105.8°109.5°
C26C27H272109.5°109.4°
C26C27H271109.4°109.5°
C26C27H273109.4°109.5°
C28C26H261105.9°109.5°
C26C28H283109.5°109.5°
C26C28H281109.5°109.4°
C26C28H282109.5°109.5°
C18C17C29123.5°120.0°
C17C18H181107.9°109.5°
C17C18H182107.9°109.4°
C17C29C30121.5°120.0°
C17C29H291119.3°120.0°
C29C30C31119.4°120.1°
C30C29H291119.2°120.0°
C29C30H301120.3°119.9°
C30C31C32120.3°120.1°
C31C30H301120.3°120.0°
C30C31H311119.9°119.9°
C31C32C16119.9°120.0°
C32C31H311119.9°120.0°
C31C32H321120.0°120.0°
C16C32H321120.0°120.0°
H121C12H122109.5°109.5°
H132C13H131109.5°109.4°
H142C14H141109.4°109.5°
H181C18H182109.5°109.4°
H012C01H011109.4°109.5°
H012C01H013109.5°109.5°
H011C01H013109.5°109.6°
H021C02H022109.5°109.5°
H062N06H061109.5°120.0°
H092N09H091109.5°119.9°
H191C19H192109.5°109.5°
H272C27H271109.5°109.5°
H272C27H273109.5°109.4°
H271C27H273109.5°109.5°
H283C28H281109.5°109.5°
H283C28H282109.4°109.5°
H281C28H282109.4°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C01C02C03H021119.8°120.0°
C01C02C03H022119.8°119.9°
C01C02C03N0469.8°89.7°
C01C02C03C10109.4°90.0°
C02C01H012H011120.0°119.9°
C02C01H012H013120.0°120.0°
C02C01H011H013120.0°120.0°
C01C02H021H022120.5°120.0°
C02C03N04C10179.2°179.7°
C02C03N04C05179.8°180.0°
C02C03C10C08179.5°179.8°
C02C03C10O110.5°0.0°
C03C02C01H012180.0°60.0°
C03C02C01H01160.0°59.9°
C03C02C01H01360.0°180.0°
C03C02H021H022120.6°120.0°
C03N04C05N06179.7°180.0°
C03N04C05N070.8°0.1°
N04C03C10C080.3°0.5°
N04C03C10O11179.7°179.7°
N04C03C02H02150.0°150.3°
N04C03C02H022170.3°30.3°
N04C05N06N07179.5°180.0°
N04C05N07C080.8°0.1°
C05N04C03C100.6°0.3°
N04C05N06H0620.0°0.0°
N04C05N06H061120.0°180.0°
N06C05N07C08179.7°180.0°
C05N06H062H061120.0°180.0°
C05N07C08N09179.8°180.0°
C05N07C08C100.5°0.3°
N07C05N06H062179.5°180.0°
N07C05N06H06160.5°0.0°
N07C08N09C10179.6°179.7°
N07C08C10O11179.7°179.7°
N07C08C10C030.3°0.6°
N07C08N09H0920.0°0.0°
N07C08N09H091120.0°180.0°
N09C08C10O110.1°0.0°
N09C08C10C03180.0°179.8°
C08N09H092H091120.0°180.0°
C08C10O11C03179.9°179.8°
C08C10O11C1283.0°89.8°
C10C08N09H092179.7°179.7°
C10C08N09H09160.3°0.3°
C10O11C12C13170.4°180.0°
C10O11C12H12150.4°60.0°
C10O11C12H12269.7°60.0°
O11C12C13H121119.9°119.9°
O11C12C13H122119.9°120.0°
O11C12C13C1455.1°180.0°
C12O11C10C0397.0°90.0°
O11C12H121H122120.2°120.0°
O11C12C13H132175.5°60.0°
O11C12C13H13165.3°60.0°
C12C13C14H132120.4°120.0°
C12C13C14H131120.4°120.0°
C12C13C14O1579.5°180.0°
C13C12H121H122120.2°120.0°
C12C13H132H131118.8°120.0°
C12C13C14H142161.4°60.0°
C12C13C14H14139.6°60.0°
C13C14O15H142119.1°120.0°
C13C14O15H141119.1°120.0°
C13C14O15C16177.8°180.0°
C14C13C12H12164.9°60.0°
C14C13C12H122175.0°60.0°
C14C13H132H131118.8°120.0°
C13C14H142H141122.7°120.0°
C14O15C16C17171.2°179.7°
C14O15C16C328.8°0.1°
O15C14C13H13240.9°60.0°
O15C14C13H131160.1°60.0°
O15C14H142H141122.6°120.0°
O15C16C17C32180.0°179.6°
O15C16C17C180.3°0.1°
O15C16C17C29179.9°179.9°
O15C16C32C31179.9°180.0°
C16O15C14H14263.1°59.9°
C16O15C14H14158.7°60.1°
O15C16C32H3210.0°0.2°
C16C17C18C1975.1°84.9°
C16C17C18C29179.6°179.9°
C16C17C29C300.2°0.0°
C17C16C32C310.0°0.3°
C16C17C18H181164.0°155.1°
C16C17C18H18245.8°35.1°
C16C17C29H291179.8°180.0°
C17C16C32H321180.0°179.8°
C18C19C20H191120.4°120.0°
C18C19C20H192120.4°120.0°
C18C19C20O2141.9°0.0°
C18C19C20N22137.9°180.0°
C19C18C17H181120.9°120.0°
C19C18C17H182120.9°120.0°
C19C18C17C29105.3°95.0°
C19C18H181H182117.3°120.0°
C18C19H191H192118.8°120.0°
C19C20O21N22179.9°180.0°
C19C20N22S23179.3°180.0°
C20C19C18C17114.7°180.0°
C20C19C18H1816.2°60.0°
C20C19C18H182124.4°60.0°
C20C19H191H192118.9°120.0°
C19C20N22H2210.7°0.0°
O21C20N22S230.8°0.1°
O21C20C19H19178.4°120.0°
O21C20C19H192162.3°120.0°
O21C20N22H221179.2°180.0°
C20N22S23H221180.0°180.0°
C20N22S23O2455.4°51.0°
C20N22S23O25172.7°178.9°
C20N22S23C2658.9°65.0°
N22C20C19H191101.7°60.0°
N22C20C19H19217.6°60.0°
N22S23O24O25126.4°116.8°
N22S23O24C26113.9°111.7°
N22S23O25C26113.3°111.7°
N22S23C26C2796.7°60.0°
N22S23C26C2836.7°180.0°
N22S23C26H261150.1°60.0°
O24S23O25C26119.7°131.6°
O24S23C26C2720.2°171.6°
O24S23C26C28153.6°68.4°
O24S23C26H26193.0°51.6°
O24S23N22H221124.6°128.9°
O25S23C26C27147.8°51.6°
O25S23C26C2878.8°68.4°
O25S23C26H26134.6°171.6°
O25S23N22H2217.3°1.0°
S23C26C27C28131.2°119.9°
S23C26C27H261111.4°120.0°
S23C26C28H261111.6°120.0°
C26S23N22H221121.1°115.0°
S23C26C27H272180.0°179.9°
S23C26C27H27160.0°60.0°
S23C26C27H27360.0°60.1°
S23C26C28H283180.0°60.0°
S23C26C28H28160.0°180.0°
S23C26C28H28260.0°60.0°
C27C26C28H261117.4°120.1°
C26C27H272H271120.0°120.0°
C26C27H272H273120.0°119.9°
C26C27H271H273119.9°120.0°
C27C26C28H28349.0°180.0°
C27C26C28H281169.0°60.0°
C27C26C28H28271.0°60.0°
C28C26C27H27248.8°60.0°
C28C26C27H27171.2°180.0°
C28C26C27H273168.8°59.9°
C26C28H283H281120.1°119.9°
C26C28H283H282120.0°120.0°
C26C28H281H282120.0°120.0°
C18C17C29C30179.8°179.9°
C18C17C16C32179.8°179.7°
C17C18H181H182117.3°120.0°
C18C17C29H2910.2°0.0°
C17C18C19H1915.7°60.0°
C17C18C19H192124.9°60.0°
C17C29C30H291180.0°179.9°
C17C29C30C310.1°0.4°
C29C17C16C320.2°0.3°
C29C17C18H18115.6°25.0°
C29C17C18H182133.8°145.0°
C17C29C30H301180.0°180.0°
C29C30C31H301180.0°179.7°
C29C30C31C320.2°0.3°
C29C30C31H311179.8°179.9°
C30C31C32H311180.0°179.8°
C30C31C32C160.2°0.0°
C31C30C29H291180.0°179.7°
C30C31C32H321179.8°179.9°
C31C32C16H321180.0°179.9°
C32C31C30H301179.8°180.0°
C10C03C02H021130.8°30.0°
C10C03C02H02210.4°150.1°
C16C32C31H311179.8°179.7°
H121C12C13H13255.5°60.0°
H121C12C13H131174.7°180.0°
H122C12C13H13264.6°180.0°
H122C12C13H13154.6°60.0°
H132C13C14H14278.2°NaN°
H132C13C14H141159.9°60.0°
H131C13C14H14241.0°60.1°
H131C13C14H14180.8°179.9°
H181C18C19H191126.6°180.0°
H181C18C19H192114.2°60.0°
H182C18C19H191115.2°60.0°
H182C18C19H1924.1°180.0°
H261C26C27H27268.6°60.1°
H261C26C27H271171.4°60.0°
H261C26C27H27351.4°180.0°
H261C26C28H28368.4°59.9°
H261C26C28H28151.6°60.0°
H261C26C28H282171.6°180.0°
H291C29C30H3010.0°0.0°
H301C30C31H3110.2°0.2°
H311C31C32H3210.2°0.2°
H012C01H011H013120.0°120.0°
H012C01C02H02160.2°60.0°
H012C01C02H02260.2°180.0°
H011C01C02H02159.8°179.9°
H011C01C02H022179.9°60.0°
H013C01C02H021179.8°60.0°
H013C01C02H02259.8°60.1°
H272C27H271H273120.0°120.0°
H283C28H281H282120.0°120.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon