GYC

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N1	CA1	sing	1.47Å	1.45Å
N1	H	sing	1.01Å	1.00Å
N1	H2	sing	1.01Å	1.00Å
SG1	CB1	sing	1.81Å	1.54Å
SG1	HG1	sing	1.34Å	1.30Å
CB1	CA1	sing	1.53Å	1.53Å
CB1	HB11	sing	1.09Å	1.10Å
CB1	HB12	sing	1.09Å	1.10Å
CA1	C1	sing	1.51Å	1.51Å
CA1	HA1	sing	1.09Å	1.10Å
C1	N2	doub	1.30Å	1.29Å
C1	N3	sing	1.37Å	1.39Å
N2	CA2	sing	1.37Å	1.38Å
N3	C2	sing	1.35Å	1.39Å
N3	CA3	sing	1.46Å	1.48Å
C2	O2	doub	1.22Å	1.25Å
C2	CA2	sing	1.47Å	1.44Å
CA2	CB2	doub	1.38Å	1.39Å
CA3	C3	sing	1.51Å	1.49Å
CA3	HA31	sing	1.09Å	1.10Å
CA3	HA32	sing	1.09Å	1.10Å
CB2	CG2	sing	1.46Å	1.40Å
CB2	HB2	sing	1.08Å	1.08Å
CG2	CD1	doub	1.40Å	1.44Å	Aromatic
CG2	CD2	sing	1.40Å	1.44Å	Aromatic
CD1	CE1	sing	1.37Å	1.41Å	Aromatic
CD1	HD1	sing	1.08Å	1.08Å
CD2	CE2	doub	1.37Å	1.42Å	Aromatic
CD2	HD2	sing	1.08Å	1.08Å
CE1	CZ	doub	1.39Å	1.43Å	Aromatic
CE1	HE1	sing	1.08Å	1.08Å
CE2	CZ	sing	1.39Å	1.42Å	Aromatic
CE2	HE2	sing	1.08Å	1.08Å
CZ	OH	sing	1.36Å	1.34Å
OH	HOH	sing	0.97Å	0.95Å
C3	O3	doub	1.21Å	1.21Å
C3	OXT	sing	1.34Å	1.29Å
OXT	HXT	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
CA1	N1	H	109.5°	111.0°
CA1	N1	H2	109.5°	110.9°
N1	CA1	CB1	109.3°	109.4°
N1	CA1	C1	107.5°	109.5°
N1	CA1	HA1	112.8°	109.5°
H	N1	H2	109.4°	111.0°
CB1	SG1	HG1	102.0°	103.0°
SG1	CB1	CA1	111.7°	109.5°
SG1	CB1	HB11	108.7°	109.5°
SG1	CB1	HB12	108.8°	109.5°
CA1	CB1	HB11	108.7°	109.4°
CA1	CB1	HB12	108.7°	109.5°
CB1	CA1	C1	114.6°	109.5°
CB1	CA1	HA1	105.4°	109.5°
HB11	CB1	HB12	110.2°	109.4°
C1	CA1	HA1	107.3°	109.5°
CA1	C1	N2	128.3°	124.4°
CA1	C1	N3	121.8°	124.3°
N2	C1	N3	109.7°	111.4°
C1	N2	CA2	108.6°	109.3°
C1	N3	C2	110.1°	108.3°
C1	N3	CA3	128.6°	125.9°
N2	CA2	C2	109.5°	105.7°
N2	CA2	CB2	129.4°	127.1°
C2	N3	CA3	121.1°	125.8°
N3	C2	O2	122.6°	127.4°
N3	C2	CA2	102.1°	105.3°
N3	CA3	C3	123.1°	109.5°
N3	CA3	HA31	105.1°	109.5°
N3	CA3	HA32	105.1°	109.5°
O2	C2	CA2	135.3°	127.3°
C2	CA2	CB2	121.1°	127.2°
CA2	CB2	CG2	132.0°	120.0°
CA2	CB2	HB2	114.0°	120.0°
C3	CA3	HA31	105.2°	109.5°
C3	CA3	HA32	105.2°	109.5°
CA3	C3	O3	120.0°	120.0°
CA3	C3	OXT	107.6°	120.0°
HA31	CA3	HA32	113.5°	109.5°
CG2	CB2	HB2	114.0°	120.0°
CB2	CG2	CD1	122.9°	120.1°
CB2	CG2	CD2	119.0°	120.2°
CD1	CG2	CD2	118.2°	119.7°
CG2	CD1	CE1	121.2°	119.9°
CG2	CD1	HD1	119.4°	120.1°
CG2	CD2	CE2	120.5°	119.9°
CG2	CD2	HD2	119.7°	120.0°
CE1	CD1	HD1	119.4°	120.0°
CD1	CE1	CZ	119.8°	120.1°
CD1	CE1	HE1	120.1°	119.9°
CE2	CD2	HD2	119.8°	120.1°
CD2	CE2	CZ	120.5°	120.2°
CD2	CE2	HE2	119.8°	119.9°
CZ	CE1	HE1	120.1°	120.0°
CE1	CZ	CE2	119.8°	120.3°
CE1	CZ	OH	121.6°	119.9°
CZ	CE2	HE2	119.8°	119.9°
CE2	CZ	OH	118.5°	119.9°
CZ	OH	HOH	109.5°	114.0°
O3	C3	OXT	125.6°	120.0°
C3	OXT	HXT	109.5°	117.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
CA1	N1	H	H2	120.0°	123.9°
N1	CA1	CB1	SG1	74.3°	60.0°
N1	CA1	CB1	C1	120.7°	120.0°
N1	CA1	CB1	HA1	121.5°	120.0°
N1	CA1	CB1	HB11	165.7°	180.0°
N1	CA1	CB1	HB12	45.7°	60.0°
N1	CA1	C1	HA1	121.6°	120.0°
N1	CA1	C1	N2	115.3°	34.9°
N1	CA1	C1	N3	59.1°	144.7°
H	N1	CA1	CB1	180.0°	60.0°
H	N1	CA1	C1	55.0°	60.0°
H	N1	CA1	HA1	63.1°	180.0°
H2	N1	CA1	CB1	60.0°	64.0°
H2	N1	CA1	C1	64.9°	176.1°
H2	N1	CA1	HA1	177.0°	56.0°
SG1	CB1	CA1	HB11	120.0°	120.0°
SG1	CB1	CA1	HB12	120.0°	120.1°
SG1	CB1	HB11	HB12	119.1°	120.0°
SG1	CB1	CA1	C1	165.0°	180.0°
SG1	CB1	CA1	HA1	47.2°	60.0°
HG1	SG1	CB1	CA1	180.0°	180.0°
HG1	SG1	CB1	HB11	60.0°	60.0°
HG1	SG1	CB1	HB12	60.0°	59.9°
CA1	CB1	HB11	HB12	119.1°	120.0°
CB1	CA1	C1	HA1	116.7°	120.0°
CB1	CA1	C1	N2	6.4°	85.0°
CB1	CA1	C1	N3	179.2°	95.3°
HB11	CB1	CA1	C1	45.0°	60.0°
HB11	CB1	CA1	HA1	72.8°	60.0°
HB12	CB1	CA1	C1	75.0°	59.9°
HB12	CB1	CA1	HA1	167.2°	180.0°
CA1	C1	N2	N3	175.0°	179.7°
CA1	C1	N2	CA2	175.0°	180.0°
CA1	C1	N3	C2	175.6°	180.0°
CA1	C1	N3	CA3	0.1°	0.0°
HA1	CA1	C1	N2	123.1°	155.0°
HA1	CA1	C1	N3	62.5°	24.7°
N2	C1	N3	C2	0.3°	0.3°
N2	C1	N3	CA3	175.2°	179.7°
C1	N2	CA2	C2	0.2°	0.2°
C1	N2	CA2	CB2	179.6°	180.0°
N3	C1	N2	CA2	0.1°	0.3°
C1	N3	C2	CA3	175.9°	180.0°
C1	N3	C2	O2	180.0°	179.9°
C1	N3	C2	CA2	0.4°	0.1°
C1	N3	CA3	C3	134.8°	90.0°
C1	N3	CA3	HA31	105.2°	150.0°
C1	N3	CA3	HA32	14.9°	30.0°
N2	CA2	C2	N3	0.4°	0.0°
N2	CA2	C2	O2	179.9°	179.9°
N2	CA2	C2	CB2	179.8°	179.8°
N2	CA2	CB2	CG2	1.0°	5.2°
N2	CA2	CB2	HB2	179.0°	174.8°
N3	C2	O2	CA2	179.5°	179.9°
N3	C2	CA2	CB2	179.4°	179.9°
C2	N3	CA3	C3	50.1°	90.0°
C2	N3	CA3	HA31	69.9°	30.0°
C2	N3	CA3	HA32	170.1°	150.0°
CA3	N3	C2	O2	4.1°	0.1°
CA3	N3	C2	CA2	175.5°	179.9°
N3	CA3	C3	HA31	120.0°	120.0°
N3	CA3	C3	HA32	120.0°	120.0°
N3	CA3	HA31	HA32	114.3°	120.0°
N3	CA3	C3	O3	157.5°	0.0°
N3	CA3	C3	OXT	49.8°	180.0°
O2	C2	CA2	CB2	0.1°	0.1°
C2	CA2	CB2	CG2	178.7°	175.0°
C2	CA2	CB2	HB2	1.3°	5.0°
CA2	CB2	CG2	HB2	180.0°	179.9°
CA2	CB2	CG2	CD1	0.3°	6.0°
CA2	CB2	CG2	CD2	178.8°	174.3°
C3	CA3	HA31	HA32	114.4°	120.0°
CA3	C3	O3	OXT	147.5°	179.9°
CA3	C3	OXT	HXT	150.8°	180.0°
HA31	CA3	C3	O3	37.6°	120.0°
HA31	CA3	C3	OXT	169.7°	60.0°
HA32	CA3	C3	O3	82.5°	120.0°
HA32	CA3	C3	OXT	70.2°	60.0°
CB2	CG2	CD1	CD2	179.1°	179.7°
CB2	CG2	CD1	CE1	178.9°	179.9°
CB2	CG2	CD1	HD1	1.0°	0.0°
CB2	CG2	CD2	CE2	178.9°	179.9°
CB2	CG2	CD2	HD2	1.1°	0.0°
HB2	CB2	CG2	CD1	179.7°	174.0°
HB2	CB2	CG2	CD2	1.2°	5.7°
CG2	CD1	CE1	HD1	180.0°	179.9°
CD1	CG2	CD2	CE2	0.2°	0.2°
CD1	CG2	CD2	HD2	179.8°	179.7°
CG2	CD1	CE1	CZ	0.1°	0.1°
CG2	CD1	CE1	HE1	179.9°	180.0°
CD2	CG2	CD1	CE1	0.1°	0.2°
CD2	CG2	CD1	HD1	179.9°	179.7°
CG2	CD2	CE2	HD2	180.0°	180.0°
CG2	CD2	CE2	CZ	0.1°	0.0°
CG2	CD2	CE2	HE2	179.9°	180.0°
CD1	CE1	CZ	HE1	180.0°	180.0°
CD1	CE1	CZ	CE2	0.3°	0.3°
CD1	CE1	CZ	OH	179.6°	180.0°
HD1	CD1	CE1	CZ	179.9°	180.0°
HD1	CD1	CE1	HE1	0.1°	0.1°
CD2	CE2	CZ	CE1	0.2°	0.3°
CD2	CE2	CZ	HE2	180.0°	180.0°
CD2	CE2	CZ	OH	179.7°	180.0°
HD2	CD2	CE2	CZ	179.9°	180.0°
HD2	CD2	CE2	HE2	0.1°	0.0°
CE1	CZ	CE2	OH	179.9°	179.7°
CE1	CZ	CE2	HE2	179.9°	179.7°
CE1	CZ	OH	HOH	180.0°	90.0°
HE1	CE1	CZ	CE2	179.7°	179.7°
HE1	CE1	CZ	OH	0.4°	0.0°
CE2	CZ	OH	HOH	0.1°	89.8°
HE2	CE2	CZ	OH	0.2°	0.0°
O3	C3	OXT	HXT	0.0°	0.1°

Definition date:	2006-05-30
Last modified:	2023-11-03
Release status:	REL
Processing site:	RCSB