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GY9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C20C25doub1.38Å1.37ÅAromatic
C20C21sing1.38Å1.37ÅAromatic
C25C24sing1.38Å1.39ÅAromatic
C21C22doub1.38Å1.39ÅAromatic
C24C23doub1.39Å1.39ÅAromatic
C22C23sing1.39Å1.39ÅAromatic
C23O6sing1.36Å1.37Å
O6C13sing1.43Å1.43Å
C13C12sing1.53Å1.51Å
O5C10doub1.21Å1.23Å
C11O4sing1.43Å1.42Å
C11C10sing1.51Å1.51Å
CL1C16sing1.74Å1.74Å
C12N3sing1.47Å1.45Å
O4C17sing1.36Å1.37Å
C10N4sing1.35Å1.34Å
C16C17doub1.39Å1.41ÅAromatic
C16C15sing1.38Å1.39ÅAromatic
C17C18sing1.39Å1.39ÅAromatic
N3C5sing1.35Å1.34Å
C15C14doub1.38Å1.36ÅAromatic
C18C19doub1.38Å1.38ÅAromatic
N4C9sing1.47Å1.47Å
N4C8sing1.47Å1.48Å
C14C19sing1.38Å1.37ÅAromatic
C5O3doub1.22Å1.23Å
C5C2sing1.48Å1.50Å
C9C6sing1.55Å1.51Å
N1C2sing1.35Å1.34Å
N1C1doub1.30Å1.33Å
C2C3doub1.39Å1.36Å
C8C1sing1.51Å1.52Å
C8C7sing1.54Å1.54Å
C1N2sing1.35Å1.37Å
C3O1sing1.36Å1.34Å
C3C4sing1.47Å1.39Å
C6C7sing1.55Å1.52Å
N2C4sing1.35Å1.38Å
C4O2doub1.22Å1.24Å
C11H1sing1.09Å1.10Å
C11H2sing1.09Å1.10Å
C12H3sing1.09Å1.10Å
C12H4sing1.09Å1.10Å
C13H5sing1.09Å1.10Å
C13H6sing1.09Å1.10Å
C14H7sing1.08Å1.08Å
C15H8sing1.08Å1.08Å
C18H9sing1.08Å1.08Å
C19H10sing1.08Å1.08Å
C20H11sing1.08Å1.08Å
C21H12sing1.08Å1.08Å
C22H13sing1.08Å1.08Å
C24H14sing1.08Å1.08Å
C25H15sing1.08Å1.08Å
C6H16sing1.09Å1.10Å
C6H17sing1.09Å1.10Å
C7H18sing1.09Å1.10Å
C7H19sing1.09Å1.10Å
C8H20sing1.09Å1.10Å
C9H21sing1.09Å1.10Å
C9H22sing1.09Å1.10Å
N2H23sing0.97Å1.00Å
N3H24sing0.97Å1.00Å
O1H25sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C25C20C21119.7°120.1°
C20C25C24120.7°120.1°
C25C20H11120.1°120.0°
C20C25H15119.7°119.9°
C20C21C22120.7°120.1°
C21C20H11120.1°119.9°
C20C21H12119.7°120.0°
C25C24C23119.4°120.0°
C25C24H14120.3°120.1°
C24C25H15119.7°120.0°
C21C22C23119.5°119.9°
C22C21H12119.7°120.0°
C21C22H13120.3°120.0°
C24C23C22120.1°119.9°
C24C23O6120.1°120.1°
C23C24H14120.3°120.0°
C22C23O6119.9°120.0°
C23C22H13120.3°120.1°
C23O6C13118.2°117.0°
O6C13C12108.2°109.5°
O6C13H5109.8°109.5°
O6C13H6109.8°109.5°
C13C12N3109.6°109.4°
C13C12H3109.5°109.5°
C13C12H4109.4°109.5°
C12C13H5109.8°109.4°
C12C13H6109.8°109.5°
O5C10C11120.9°120.0°
O5C10N4120.3°120.0°
O4C11C10112.3°109.5°
C11O4C17125.1°117.0°
O4C11H1108.8°109.5°
O4C11H2108.7°109.4°
C11C10N4118.7°120.0°
C10C11H1108.8°109.5°
C10C11H2108.8°109.4°
CL1C16C17123.5°120.0°
CL1C16C15115.8°120.0°
C12N3C5122.2°120.0°
N3C12H3109.4°109.5°
N3C12H4109.4°109.5°
C12N3H24118.9°120.0°
O4C17C16122.5°120.1°
O4C17C18120.7°120.1°
C10N4C9123.5°125.6°
C10N4C8124.7°125.6°
C17C16C15120.7°119.9°
C16C17C18116.9°119.9°
C16C15C14120.8°120.0°
C16C15H8119.6°120.0°
C17C18C19121.6°120.0°
C17C18H9119.2°120.0°
N3C5O3123.1°120.0°
N3C5C2115.1°120.0°
C5N3H24118.9°120.0°
C15C14C19119.7°120.2°
C15C14H7120.1°119.9°
C14C15H8119.6°120.0°
C18C19C14120.3°120.1°
C19C18H9119.2°120.1°
C18C19H10119.9°120.0°
C9N4C8111.8°108.7°
N4C9C6103.0°104.9°
N4C9H21111.1°110.4°
N4C9H22111.1°110.5°
N4C8C1112.7°109.9°
N4C8C7100.6°107.2°
N4C8H20110.1°110.0°
C19C14H7120.2°119.9°
C14C19H10119.8°119.9°
O3C5C2121.7°120.0°
C5C2N1116.9°120.3°
C5C2C3120.9°120.3°
C9C6C7101.6°101.6°
C9C6H16111.4°111.1°
C9C6H17111.4°111.0°
C6C9H21111.1°110.3°
C6C9H22111.1°110.4°
C2N1C1119.4°122.2°
N1C2C3122.2°119.5°
N1C1C8117.7°118.7°
N1C1N2120.5°122.6°
C2C3O1123.8°121.1°
C2C3C4119.7°117.7°
C1C8C7114.3°109.8°
C8C1N2121.8°118.8°
C1C8H20109.6°109.9°
C8C7C6101.9°103.0°
C8C7H18111.3°110.7°
C8C7H19111.3°110.9°
C7C8H20109.3°109.9°
C1N2C4121.7°120.1°
C1N2H23119.1°119.9°
O1C3C4116.5°121.1°
C3O1H25109.5°114.0°
C3C4N2116.5°117.9°
C3C4O2124.0°121.1°
C7C6H16111.4°111.0°
C7C6H17111.4°111.0°
C6C7H18111.3°110.7°
C6C7H19111.3°110.7°
N2C4O2119.5°121.0°
C4N2H23119.1°120.0°
H1C11H2109.5°109.5°
H3C12H4109.5°109.5°
H5C13H6109.5°109.5°
H16C6H17109.5°110.9°
H18C7H19109.5°110.7°
H21C9H22109.5°110.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C25C20C21H11180.0°179.6°
C20C25C24H15180.0°180.0°
C25C20C21C220.0°0.1°
C20C25C24C230.4°0.1°
C25C20C21H12180.0°180.0°
C20C25C24H14179.6°180.0°
C21C20C25C240.2°0.1°
C20C21C22H12180.0°179.9°
C20C21C22C230.1°0.0°
C20C21C22H13179.8°179.9°
C21C20C25H15179.8°180.0°
C25C24C23H14180.0°180.0°
C25C24C23C220.6°0.0°
C25C24C23O6179.9°179.9°
C24C25C20H11179.8°179.7°
C21C22C23C240.4°0.0°
C21C22C23H13180.0°179.9°
C21C22C23O6179.7°180.0°
C22C21C20H11179.9°179.7°
C24C23C22O6179.3°179.9°
C24C23O6C135.8°5.0°
C24C23C22H13179.6°180.0°
C23C24C25H15179.5°180.0°
C22C23O6C13174.9°175.0°
C23C22C21H12179.8°180.0°
C22C23C24H14179.5°180.0°
C23O6C13C12167.3°175.2°
C23O6C13H572.9°64.8°
C23O6C13H647.5°55.3°
O6C23C22H130.2°0.1°
O6C23C24H140.1°0.0°
O6C13C12H5119.8°120.0°
O6C13C12H6119.8°120.0°
O6C13C12N356.9°66.6°
O6C13C12H363.1°173.5°
O6C13C12H4176.9°53.4°
O6C13H5H6120.6°120.0°
C13C12N3H3120.0°120.0°
C13C12N3H4120.0°120.0°
C13C12N3C5110.6°175.0°
C13C12H3H4119.9°120.0°
C12C13H5H6120.6°120.0°
C13C12N3H2469.4°4.9°
O5C10C11O4108.9°5.0°
O5C10C11N4178.7°179.9°
O5C10N4C97.4°175.3°
O5C10N4C8172.6°4.8°
O5C10C11H111.5°125.0°
O5C10C11H2130.7°115.0°
O4C11C10H1120.4°120.0°
O4C11C10H2120.4°120.0°
O4C11C10N472.4°175.0°
C11O4C17C1614.9°174.8°
C11O4C17C18164.9°5.1°
O4C11H1H2118.7°120.0°
C10C11O4C17142.9°175.1°
C11C10N4C9171.3°4.7°
C11C10N4C88.6°175.2°
C10C11H1H2118.7°120.0°
CL1C16C17O40.5°0.1°
CL1C16C17C15179.3°179.9°
CL1C16C17C18179.7°180.0°
CL1C16C15C14179.7°180.0°
CL1C16C15H80.3°0.1°
C12N3C5H24180.0°179.9°
C12N3C5O37.4°5.1°
C12N3C5C2171.3°174.9°
N3C12H3H4119.9°120.0°
N3C12C13H5176.7°173.4°
N3C12C13H662.9°53.4°
O4C17C16C18179.8°179.9°
O4C17C16C15179.9°180.0°
O4C17C18C19180.0°179.9°
C17O4C11H196.7°55.0°
C17O4C11H222.5°65.0°
O4C17C18H90.0°0.0°
C10N4C9C8180.0°179.9°
C10N4C9C6168.6°155.8°
C10N4C8C174.6°61.7°
C10N4C8C7163.2°178.9°
N4C10C11H1167.2°54.9°
N4C10C11H248.0°65.1°
C10N4C8H2048.0°59.4°
C10N4C9H2172.4°85.4°
C10N4C9H2249.7°36.9°
C17C16C15C140.3°0.1°
C16C17C18C190.3°0.0°
C17C16C15H8179.7°180.0°
C16C17C18H9179.7°179.9°
C15C16C17C180.4°0.1°
C16C15C14H8180.0°179.9°
C16C15C14C190.1°0.0°
C16C15C14H7180.0°179.8°
C17C18C19H9180.0°179.9°
C17C18C19C140.0°0.1°
C17C18C19H10180.0°179.7°
N3C5O3C2178.6°179.9°
N3C5C2N11.6°173.8°
N3C5C2C3178.2°6.4°
C5N3C12H3129.3°65.0°
C5N3C12H49.4°55.1°
C15C14C19C180.1°0.1°
C15C14C19H7180.0°179.8°
C15C14C19H10179.9°179.7°
C18C19C14H10180.0°179.6°
C18C19C14H7179.9°179.7°
N4C9C6H21119.0°118.8°
N4C9C6H22118.9°119.0°
C9N4C8C1105.3°118.4°
C9N4C8C716.9°1.0°
N4C9C6C735.1°37.0°
N4C9C6H16153.9°155.1°
N4C9C6H1783.6°81.1°
C9N4C8H20132.1°120.5°
N4C9H21H22123.0°122.4°
C8N4C9C611.3°24.1°
N4C8C1N115.1°7.1°
N4C8C1C7114.1°117.8°
N4C8C1H20122.9°121.2°
N4C8C7H20115.8°119.6°
N4C8C1N2165.0°173.1°
N4C8C7C638.2°22.2°
N4C8C7H18157.0°140.5°
N4C8C7H1980.6°96.3°
C8N4C9H21107.6°94.7°
C8N4C9H22130.3°143.0°
C19C14C15H8179.9°180.0°
C14C19C18H9180.0°180.0°
O3C5C2N1179.6°6.1°
O3C5C2C30.5°173.6°
O3C5N3H24172.6°174.8°
C5C2N1C3179.8°179.7°
C5C2N1C1179.9°179.7°
C5C2C3O10.3°0.0°
C5C2C3C4179.9°180.0°
C2C5N3H248.7°5.1°
C9C6C7C846.1°35.5°
C9C6C7H16118.7°118.1°
C9C6C7H17118.7°118.0°
C9C6H16H17123.7°123.9°
C9C6C7H18164.9°153.8°
C9C6C7H1972.7°83.1°
C6C9H21H22123.0°122.2°
C2N1C1C8179.8°179.7°
C2N1C1N20.1°0.0°
N1C2C3O1179.9°179.8°
N1C2C3C40.3°0.2°
C1N1C2C30.1°0.0°
N1C1C8N2179.9°179.7°
N1C1C8C799.0°124.9°
N1C1N2C40.4°0.3°
N1C1C8H20138.0°114.1°
N1C1N2H23179.6°179.8°
C2C3O1C4179.6°180.0°
C2C3C4N20.5°0.5°
C2C3C4O2179.6°180.0°
C2C3O1H250.0°180.0°
C1C8C7H20123.2°121.0°
C1C8C7C682.9°141.6°
C8C1N2C4179.5°180.0°
C1C8C7H1835.9°100.0°
C1C8C7H19158.4°23.2°
C8C1N2H230.5°0.0°
C7C8C1N280.9°55.4°
C8C7C6H18118.8°118.3°
C8C7C6H19118.8°118.6°
C8C7C6H16164.8°153.6°
C8C7C6H1772.6°82.5°
C8C7H18H19123.5°123.3°
C1N2C4C30.6°0.6°
C1N2C4H23180.0°179.9°
C1N2C4O2179.6°180.0°
N2C1C8H2042.1°65.6°
O1C3C4N2179.8°179.5°
O1C3C4O20.0°0.0°
C3C4N2O2179.8°179.4°
C3C4N2H23179.4°179.5°
C4C3O1H25179.6°0.0°
C7C6H16H17123.7°123.9°
C6C7H18H19123.5°123.2°
C6C7C8H20154.0°97.4°
C7C6C9H2183.9°81.9°
C7C6C9H22154.1°156.0°
O2C4N2H230.4°0.1°
H3C12C13H556.7°53.5°
H3C12C13H6177.1°66.5°
H3C12N3H2450.7°115.0°
H4C12C13H563.3°66.6°
H4C12C13H657.1°173.4°
H4C12N3H24170.6°124.9°
H7C14C15H80.1°0.3°
H7C14C19H100.1°0.1°
H9C18C19H100.0°0.4°
H11C20C21H120.1°0.3°
H11C20C25H150.2°0.3°
H12C21C22H130.2°0.0°
H14C24C25H150.4°0.0°
H16C6C7H1876.4°88.1°
H16C6C7H1946.1°35.0°
H16C6C9H2134.9°36.3°
H16C6C9H2287.2°85.9°
H17C6C7H1846.2°35.8°
H17C6C7H19168.6°158.9°
H17C6C9H21157.4°160.1°
H17C6C9H2235.4°37.9°
H18C7C8H2087.2°21.0°
H19C7C8H2035.2°144.2°

246704

PDB entries from 2025-12-24

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