GVN
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N1 | C2 | sing | 1.45Å | 1.49Å | |
C2 | C3 | sing | 1.56Å | 1.53Å | |
C3 | C4 | sing | 1.54Å | 1.52Å | |
C4 | C5 | sing | 1.37Å | 1.39Å | |
C5 | C6 | doub | 1.40Å | 1.38Å | |
C6 | C7 | sing | 1.39Å | 1.39Å | |
C7 | CL8 | sing | 1.72Å | 1.74Å | |
C7 | C9 | doub | 1.39Å | 1.39Å | |
C4 | C10 | doub | 1.37Å | 1.39Å | |
C9 | C10 | sing | 1.40Å | 1.38Å | |
C3 | C11 | sing | 1.49Å | 1.52Å | |
C11 | C12 | sing | 1.39Å | 1.39Å | |
C12 | C13 | doub | 1.39Å | 1.38Å | |
C13 | C14 | sing | 1.39Å | 1.39Å | |
C14 | C15 | doub | 1.39Å | 1.39Å | |
C11 | C16 | doub | 1.40Å | 1.39Å | |
C15 | C16 | sing | 1.39Å | 1.38Å | |
C14 | C17 | sing | 1.44Å | 1.47Å | |
C17 | C18 | doub | 1.37Å | 1.39Å | |
C18 | N19 | sing | 1.36Å | 1.33Å | |
N19 | N20 | sing | 1.34Å | 1.36Å | |
C17 | C21 | sing | 1.40Å | 1.36Å | |
N20 | C21 | doub | 1.34Å | 1.34Å | |
N1 | H1N1 | sing | 1.00Å | 1.00Å | |
N1 | H1N2 | sing | 1.00Å | 1.00Å | |
C2 | H2C1 | sing | 1.10Å | 1.10Å | |
C2 | H2C2 | sing | 1.09Å | 1.10Å | |
C3 | H3 | sing | 1.11Å | 1.10Å | |
C5 | H5 | sing | 1.09Å | 1.08Å | |
C10 | H10 | sing | 1.09Å | 1.08Å | |
C6 | H6 | sing | 1.09Å | 1.08Å | |
C9 | H9 | sing | 1.09Å | 1.08Å | |
C12 | H12 | sing | 1.09Å | 1.08Å | |
C16 | H16 | sing | 1.09Å | 1.08Å | |
C13 | H13 | sing | 1.09Å | 1.08Å | |
C15 | H15 | sing | 1.09Å | 1.08Å | |
C18 | H18 | sing | 1.08Å | 1.08Å | |
C21 | H21 | sing | 1.08Å | 1.08Å | |
N19 | H19 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N1 | C2 | C3 | 111.7° | 111.5° |
C2 | N1 | H1N1 | 109.5° | 118.7° |
C2 | N1 | H1N2 | 109.5° | 118.7° |
N1 | C2 | H2C1 | 108.7° | 108.2° |
N1 | C2 | H2C2 | 108.3° | 108.8° |
C2 | C3 | C4 | 113.8° | 112.1° |
C2 | C3 | C11 | 109.7° | 114.2° |
C3 | C2 | H2C1 | 108.7° | 109.2° |
C3 | C2 | H2C2 | 108.2° | 112.2° |
C2 | C3 | H3 | 107.1° | 103.4° |
C3 | C4 | C5 | 121.6° | 118.3° |
C3 | C4 | C10 | 119.2° | 118.3° |
C4 | C3 | C11 | 111.7° | 112.5° |
C4 | C3 | H3 | 104.9° | 105.8° |
C4 | C5 | C6 | 120.3° | 118.3° |
C5 | C4 | C10 | 119.1° | 123.4° |
C4 | C5 | H5 | 119.8° | 122.2° |
C5 | C6 | C7 | 120.1° | 120.0° |
C6 | C5 | H5 | 119.8° | 119.5° |
C5 | C6 | H6 | 120.0° | 119.2° |
C6 | C7 | CL8 | 120.2° | 120.0° |
C6 | C7 | C9 | 119.7° | 120.0° |
C7 | C6 | H6 | 119.9° | 120.8° |
CL8 | C7 | C9 | 120.1° | 119.9° |
C7 | C9 | C10 | 120.2° | 120.0° |
C7 | C9 | H9 | 119.9° | 120.9° |
C4 | C10 | C9 | 120.5° | 118.3° |
C4 | C10 | H10 | 119.8° | 122.2° |
C9 | C10 | H10 | 119.7° | 119.5° |
C10 | C9 | H9 | 119.9° | 119.2° |
C3 | C11 | C12 | 120.5° | 120.0° |
C3 | C11 | C16 | 120.4° | 120.0° |
C11 | C3 | H3 | 109.4° | 108.1° |
C11 | C12 | C13 | 120.4° | 120.0° |
C12 | C11 | C16 | 119.0° | 120.0° |
C11 | C12 | H12 | 119.8° | 120.5° |
C12 | C13 | C14 | 120.5° | 120.0° |
C13 | C12 | H12 | 119.8° | 119.5° |
C12 | C13 | H13 | 119.7° | 119.1° |
C13 | C14 | C15 | 119.0° | 120.0° |
C13 | C14 | C17 | 120.7° | 120.0° |
C14 | C13 | H13 | 119.7° | 121.0° |
C14 | C15 | C16 | 120.5° | 120.0° |
C15 | C14 | C17 | 120.2° | 120.0° |
C14 | C15 | H15 | 119.7° | 120.9° |
C11 | C16 | C15 | 120.5° | 120.0° |
C11 | C16 | H16 | 119.8° | 120.5° |
C15 | C16 | H16 | 119.8° | 119.5° |
C16 | C15 | H15 | 119.7° | 119.1° |
C14 | C17 | C18 | 127.9° | 123.9° |
C14 | C17 | C21 | 127.1° | 131.1° |
C17 | C18 | N19 | 111.3° | 105.6° |
C18 | C17 | C21 | 104.9° | 104.9° |
C17 | C18 | H18 | 124.4° | 133.0° |
C18 | N19 | N20 | 105.0° | 113.9° |
N19 | C18 | H18 | 124.3° | 121.3° |
C18 | N19 | H19 | 127.5° | 127.9° |
N19 | N20 | C21 | 110.9° | 103.1° |
N20 | N19 | H19 | 127.5° | 118.2° |
C17 | C21 | N20 | 107.9° | 112.5° |
C17 | C21 | H21 | 126.1° | 128.8° |
N20 | C21 | H21 | 126.0° | 118.7° |
H1N1 | N1 | H1N2 | 109.5° | 121.1° |
H2C1 | C2 | H2C2 | 111.2° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C2 | C3 | H2C1 | 120.0° | 119.4° |
N1 | C2 | C3 | H2C2 | 119.1° | 122.3° |
N1 | C2 | C3 | C4 | 56.7° | 171.3° |
N1 | C2 | C3 | C11 | 177.4° | 59.4° |
C2 | N1 | H1N1 | H1N2 | 120.0° | 166.3° |
N1 | C2 | H2C1 | H2C2 | 119.1° | 117.0° |
N1 | C2 | C3 | H3 | 58.7° | 57.8° |
C2 | C3 | C4 | C11 | 124.8° | 130.2° |
C2 | C3 | C4 | H3 | 116.8° | 112.0° |
C2 | C3 | C4 | C5 | 39.8° | 149.9° |
C2 | C3 | C4 | C10 | 141.5° | 30.0° |
C2 | C3 | C11 | H3 | 117.2° | 114.4° |
C2 | C3 | C11 | C12 | 108.8° | 114.4° |
C2 | C3 | C11 | C16 | 69.8° | 65.6° |
C3 | C2 | N1 | H1N1 | 103.2° | 144.5° |
C3 | C2 | N1 | H1N2 | 16.8° | 48.9° |
C3 | C2 | H2C1 | H2C2 | 119.1° | 121.6° |
C3 | C4 | C5 | C10 | 178.7° | 180.0° |
C3 | C4 | C5 | C6 | 179.0° | 180.0° |
C3 | C4 | C10 | C9 | 179.1° | 180.0° |
C4 | C3 | C11 | H3 | 115.7° | 116.4° |
C4 | C3 | C11 | C12 | 124.2° | 116.5° |
C4 | C3 | C11 | C16 | 57.3° | 63.6° |
C4 | C3 | C2 | H2C1 | 63.3° | 69.3° |
C4 | C3 | C2 | H2C2 | 175.8° | 48.9° |
C3 | C4 | C5 | H5 | 1.0° | 0.0° |
C3 | C4 | C10 | H10 | 0.9° | 0.0° |
C4 | C5 | C6 | H5 | 180.0° | 180.0° |
C4 | C5 | C6 | C7 | 0.1° | 0.0° |
C5 | C4 | C10 | C9 | 0.4° | 0.0° |
C5 | C4 | C3 | C11 | 85.0° | 79.9° |
C5 | C4 | C3 | H3 | 156.6° | 37.9° |
C5 | C4 | C10 | H10 | 179.6° | 180.0° |
C4 | C5 | C6 | H6 | 179.9° | 180.0° |
C5 | C6 | C7 | H6 | 180.0° | 180.0° |
C5 | C6 | C7 | CL8 | 180.0° | 180.0° |
C5 | C6 | C7 | C9 | 0.1° | 0.0° |
C6 | C5 | C4 | C10 | 0.4° | 0.0° |
C6 | C7 | CL8 | C9 | 179.9° | 180.0° |
C6 | C7 | C9 | C10 | 0.1° | 0.0° |
C7 | C6 | C5 | H5 | 179.9° | 180.0° |
C6 | C7 | C9 | H9 | 179.8° | 180.0° |
CL8 | C7 | C9 | C10 | 180.0° | 180.0° |
CL8 | C7 | C6 | H6 | 0.0° | 0.1° |
CL8 | C7 | C9 | H9 | 0.0° | 0.0° |
C7 | C9 | C10 | C4 | 0.1° | 0.0° |
C7 | C9 | C10 | H9 | 180.0° | 180.0° |
C7 | C9 | C10 | H10 | 179.9° | 180.0° |
C9 | C7 | C6 | H6 | 179.9° | 180.0° |
C4 | C10 | C9 | H10 | 180.0° | 180.0° |
C10 | C4 | C3 | C11 | 93.7° | 100.2° |
C10 | C4 | C3 | H3 | 24.7° | 142.0° |
C10 | C4 | C5 | H5 | 179.6° | 180.0° |
C4 | C10 | C9 | H9 | 179.9° | 180.0° |
C3 | C11 | C12 | C16 | 178.6° | 180.0° |
C3 | C11 | C12 | C13 | 179.1° | 180.0° |
C3 | C11 | C16 | C15 | 179.1° | 180.0° |
C11 | C3 | C2 | H2C1 | 62.6° | 60.0° |
C11 | C3 | C2 | H2C2 | 58.4° | 178.3° |
C3 | C11 | C12 | H12 | 0.9° | 0.1° |
C3 | C11 | C16 | H16 | 0.9° | 0.1° |
C11 | C12 | C13 | H12 | 180.0° | 179.9° |
C11 | C12 | C13 | C14 | 0.4° | 0.1° |
C12 | C11 | C16 | C15 | 0.5° | 0.1° |
C12 | C11 | C3 | H3 | 8.5° | 0.0° |
C12 | C11 | C16 | H16 | 179.5° | 180.0° |
C11 | C12 | C13 | H13 | 179.7° | 180.0° |
C12 | C13 | C14 | H13 | 180.0° | 179.9° |
C12 | C13 | C14 | C15 | 1.3° | 0.1° |
C13 | C12 | C11 | C16 | 0.5° | 0.1° |
C12 | C13 | C14 | C17 | 177.8° | 180.0° |
C13 | C14 | C15 | C17 | 176.6° | 179.9° |
C13 | C14 | C15 | C16 | 1.3° | 0.1° |
C13 | C14 | C17 | C18 | 6.7° | 150.0° |
C13 | C14 | C17 | C21 | 178.5° | 30.0° |
C14 | C13 | C12 | H12 | 179.7° | 180.0° |
C13 | C14 | C15 | H15 | 178.7° | 180.0° |
C14 | C15 | C16 | C11 | 0.5° | 0.1° |
C14 | C15 | C16 | H15 | 180.0° | 179.9° |
C15 | C14 | C17 | C18 | 169.8° | 30.0° |
C15 | C14 | C17 | C21 | 5.0° | 150.0° |
C14 | C15 | C16 | H16 | 179.5° | 180.0° |
C15 | C14 | C13 | H13 | 178.8° | 180.0° |
C11 | C16 | C15 | H16 | 180.0° | 179.9° |
C16 | C11 | C3 | H3 | 172.9° | 180.0° |
C16 | C11 | C12 | H12 | 179.5° | 179.9° |
C11 | C16 | C15 | H15 | 179.5° | 180.0° |
C16 | C15 | C14 | C17 | 177.9° | 180.0° |
C14 | C17 | C18 | C21 | 175.7° | 180.0° |
C14 | C17 | C18 | N19 | 177.2° | 179.9° |
C14 | C17 | C21 | N20 | 177.1° | 180.0° |
C17 | C14 | C13 | H13 | 2.2° | 0.1° |
C17 | C14 | C15 | H15 | 2.1° | 0.0° |
C14 | C17 | C18 | H18 | 2.9° | 0.1° |
C14 | C17 | C21 | H21 | 2.9° | 0.1° |
C17 | C18 | N19 | H18 | 180.0° | 179.9° |
C17 | C18 | N19 | N20 | 0.9° | 0.1° |
C18 | C17 | C21 | N20 | 1.3° | 0.0° |
C18 | C17 | C21 | H21 | 178.7° | 179.9° |
C17 | C18 | N19 | H19 | 179.1° | 179.8° |
C18 | N19 | N20 | H19 | 180.0° | 179.9° |
N19 | C18 | C17 | C21 | 1.4° | 0.0° |
C18 | N19 | N20 | C21 | 0.1° | 0.1° |
N19 | N20 | C21 | C17 | 0.8° | 0.0° |
N20 | N19 | C18 | H18 | 179.1° | 179.9° |
N19 | N20 | C21 | H21 | 179.2° | 180.0° |
C17 | C21 | N20 | H21 | 180.0° | 179.9° |
C21 | C17 | C18 | H18 | 178.6° | 179.9° |
C21 | N20 | N19 | H19 | 180.0° | 179.8° |
H1N1 | N1 | C2 | H2C1 | 16.8° | 95.5° |
H1N1 | N1 | C2 | H2C2 | 137.7° | 20.2° |
H1N2 | N1 | C2 | H2C1 | 136.8° | 71.1° |
H1N2 | N1 | C2 | H2C2 | 102.3° | 173.2° |
H2C1 | C2 | C3 | H3 | 178.7° | 177.2° |
H2C2 | C2 | C3 | H3 | 60.3° | 64.6° |
H5 | C5 | C6 | H6 | 0.1° | 0.0° |
H10 | C10 | C9 | H9 | 0.1° | 0.0° |
H12 | C12 | C13 | H13 | 0.3° | 0.1° |
H16 | C16 | C15 | H15 | 0.5° | 0.1° |
H18 | C18 | N19 | H19 | 0.9° | 0.1° |