GVA
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OB | C | doub | 1.22Å | 1.25Å | |
| C | OA | sing | 1.36Å | 1.25Å | |
| C | CA | sing | 1.51Å | 1.52Å | |
| OA | HOA | sing | 0.98Å | 0.95Å | |
| CA | CB | sing | 1.53Å | 1.53Å | |
| CA | HA1 | sing | 1.10Å | 1.10Å | |
| CA | HA2 | sing | 1.10Å | 1.10Å | |
| CB | CG | sing | 1.53Å | 1.53Å | |
| CB | HB1 | sing | 1.10Å | 1.10Å | |
| CB | HB2 | sing | 1.10Å | 1.10Å | |
| CG | CD | sing | 1.53Å | 1.52Å | |
| CG | HG1 | sing | 1.10Å | 1.10Å | |
| CG | HG2 | sing | 1.10Å | 1.10Å | |
| CD | NE | sing | 1.44Å | 1.45Å | |
| CD | HD1 | sing | 1.09Å | 1.10Å | |
| CD | HD2 | sing | 1.10Å | 1.10Å | |
| NE | CZ | sing | 1.38Å | 1.34Å | |
| NE | HNE | sing | 1.02Å | 1.00Å | |
| CZ | NH2 | sing | 1.37Å | 1.33Å | |
| CZ | NH1 | doub | 1.31Å | 1.27Å | |
| NH2 | HH21 | sing | 1.01Å | 1.00Å | |
| NH2 | HH22 | sing | 1.01Å | 1.00Å | |
| NH1 | HNH1 | sing | 1.03Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OB | C | OA | 121.4° | 123.4° |
| OB | C | CA | 117.5° | 124.0° |
| OA | C | CA | 121.0° | 112.7° |
| C | OA | HOA | 109.5° | 115.1° |
| C | CA | CB | 113.1° | 112.5° |
| C | CA | HA1 | 108.3° | 108.2° |
| C | CA | HA2 | 107.5° | 108.4° |
| CB | CA | HA1 | 108.3° | 110.6° |
| CB | CA | HA2 | 107.4° | 110.8° |
| CA | CB | CG | 112.3° | 112.4° |
| CA | CB | HB1 | 108.6° | 109.9° |
| CA | CB | HB2 | 107.9° | 108.4° |
| HA1 | CA | HA2 | 112.3° | 106.1° |
| CG | CB | HB1 | 108.5° | 110.0° |
| CG | CB | HB2 | 107.9° | 109.0° |
| CB | CG | CD | 111.6° | 112.7° |
| CB | CG | HG1 | 108.8° | 108.9° |
| CB | CG | HG2 | 108.3° | 110.0° |
| HB1 | CB | HB2 | 111.7° | 107.0° |
| CD | CG | HG1 | 108.8° | 108.3° |
| CD | CG | HG2 | 108.3° | 109.6° |
| CG | CD | NE | 111.1° | 112.9° |
| CG | CD | HD1 | 108.9° | 111.4° |
| CG | CD | HD2 | 108.6° | 109.6° |
| HG1 | CG | HG2 | 111.1° | 107.2° |
| NE | CD | HD1 | 108.9° | 107.8° |
| NE | CD | HD2 | 108.6° | 106.8° |
| CD | NE | CZ | 122.6° | 127.2° |
| CD | NE | HNE | 118.7° | 116.0° |
| HD1 | CD | HD2 | 110.7° | 108.1° |
| CZ | NE | HNE | 118.7° | 116.8° |
| NE | CZ | NH2 | 120.5° | 116.8° |
| NE | CZ | NH1 | 119.8° | 121.4° |
| NH2 | CZ | NH1 | 119.7° | 121.8° |
| CZ | NH2 | HH21 | 110.5° | 122.4° |
| CZ | NH2 | HH22 | 124.7° | 121.0° |
| CZ | NH1 | HNH1 | 110.5° | 108.5° |
| HH21 | NH2 | HH22 | 124.7° | 116.7° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OB | C | OA | CA | 179.6° | 179.7° |
| OB | C | OA | HOA | 0.0° | 0.1° |
| OB | C | CA | CB | 168.4° | 2.4° |
| OB | C | CA | HA1 | 48.4° | 120.0° |
| OB | C | CA | HA2 | 73.2° | 125.3° |
| OA | C | CA | CB | 12.0° | 177.9° |
| OA | C | CA | HA1 | 132.0° | 59.7° |
| OA | C | CA | HA2 | 106.4° | 55.0° |
| CA | C | OA | HOA | 179.6° | 179.8° |
| C | CA | CB | HA1 | 120.0° | 121.1° |
| C | CA | CB | HA2 | 118.4° | 121.5° |
| C | CA | HA1 | HA2 | 118.5° | 116.2° |
| C | CA | CB | CG | 74.0° | 177.2° |
| C | CA | CB | HB1 | 166.0° | 60.0° |
| C | CA | CB | HB2 | 44.8° | 56.7° |
| CB | CA | HA1 | HA2 | 118.5° | 120.3° |
| CA | CB | CG | HB1 | 120.0° | 122.8° |
| CA | CB | CG | HB2 | 118.8° | 120.1° |
| CA | CB | HB1 | HB2 | 118.9° | 117.5° |
| CA | CB | CG | CD | 173.8° | 179.8° |
| CA | CB | CG | HG1 | 66.2° | 60.0° |
| CA | CB | CG | HG2 | 54.6° | 57.2° |
| HA1 | CA | CB | CG | 46.0° | 56.1° |
| HA1 | CA | CB | HB1 | 74.0° | 178.9° |
| HA1 | CA | CB | HB2 | 164.8° | 64.4° |
| HA2 | CA | CB | CG | 167.6° | 61.3° |
| HA2 | CA | CB | HB1 | 47.6° | 61.6° |
| HA2 | CA | CB | HB2 | 73.6° | 178.2° |
| CG | CB | HB1 | HB2 | 118.8° | 118.3° |
| CB | CG | CD | HG1 | 120.0° | 120.5° |
| CB | CG | CD | HG2 | 119.1° | 122.9° |
| CB | CG | HG1 | HG2 | 119.1° | 119.0° |
| CB | CG | CD | NE | 177.8° | 178.5° |
| CB | CG | CD | HD1 | 62.2° | 60.0° |
| CB | CG | CD | HD2 | 58.5° | 59.6° |
| HB1 | CB | CG | CD | 53.7° | 57.0° |
| HB1 | CB | CG | HG1 | 173.8° | 177.2° |
| HB1 | CB | CG | HG2 | 65.4° | 65.6° |
| HB2 | CB | CG | CD | 67.4° | 60.1° |
| HB2 | CB | CG | HG1 | 52.6° | 60.1° |
| HB2 | CB | CG | HG2 | 173.4° | 177.3° |
| CD | CG | HG1 | HG2 | 119.1° | 118.2° |
| CG | CD | NE | HD1 | 120.0° | 123.5° |
| CG | CD | NE | HD2 | 119.3° | 120.5° |
| CG | CD | HD1 | HD2 | 119.3° | 120.5° |
| CG | CD | NE | CZ | 178.2° | 176.5° |
| CG | CD | NE | HNE | 1.8° | 3.4° |
| HG1 | CG | CD | NE | 57.8° | 58.0° |
| HG1 | CG | CD | HD1 | 177.8° | 179.5° |
| HG1 | CG | CD | HD2 | 61.5° | 60.9° |
| HG2 | CG | CD | NE | 63.0° | 58.6° |
| HG2 | CG | CD | HD1 | 56.9° | 62.9° |
| HG2 | CG | CD | HD2 | 177.6° | 177.5° |
| NE | CD | HD1 | HD2 | 119.4° | 115.1° |
| CD | NE | CZ | HNE | 180.0° | 180.0° |
| CD | NE | CZ | NH2 | 17.5° | 0.1° |
| CD | NE | CZ | NH1 | 162.7° | 180.0° |
| HD1 | CD | NE | CZ | 61.8° | 59.9° |
| HD1 | CD | NE | HNE | 118.2° | 120.1° |
| HD2 | CD | NE | CZ | 58.9° | 56.0° |
| HD2 | CD | NE | HNE | 121.1° | 124.0° |
| NE | CZ | NH2 | NH1 | 179.8° | 180.0° |
| NE | CZ | NH2 | HH21 | 180.0° | 0.1° |
| NE | CZ | NH2 | HH22 | 0.0° | 180.0° |
| NE | CZ | NH1 | HNH1 | 0.1° | 0.0° |
| HNE | NE | CZ | NH2 | 162.5° | 180.0° |
| HNE | NE | CZ | NH1 | 17.3° | 0.0° |
| CZ | NH2 | HH21 | HH22 | 180.0° | 179.9° |
| NH2 | CZ | NH1 | HNH1 | 179.9° | 180.0° |
| NH1 | CZ | NH2 | HH21 | 0.2° | 179.9° |
| NH1 | CZ | NH2 | HH22 | 179.8° | 0.0° |
