Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

GV9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C10O11doub1.21Å1.22Å
C12C10sing1.51Å1.50Å
C10N9sing1.35Å1.34Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C12H12Bsing1.09Å1.10Å
N9C3sing1.40Å1.36Å
N9HN9sing0.97Å1.00Å
C4C3sing1.38Å1.41ÅAromatic
C3C2doub1.38Å1.49ÅAromatic
C4C5doub1.34Å1.40ÅAromatic
C4H4sing1.08Å1.08Å
C5S1sing1.71Å1.74ÅAromatic
C5H5sing1.08Å1.08Å
C2S1sing1.76Å1.73ÅAromatic
C2C6sing1.41Å1.49Å
O7C6doub1.22Å1.25Å
C6O8sing1.35Å1.25Å
O8HO8sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O11C10C12120.8°120.0°
O11C10N9124.1°119.9°
C12C10N9115.1°120.0°
C10C12H12109.5°109.5°
C10C12H12A109.5°109.5°
C10C12H12B109.5°109.5°
C10N9C3122.8°120.0°
C10N9HN9118.6°120.0°
H12C12H12A109.5°109.4°
H12C12H12B109.4°109.5°
H12AC12H12B109.4°109.5°
C3N9HN9118.6°120.0°
N9C3C4132.1°123.5°
N9C3C2115.3°123.5°
C4C3C2112.6°113.0°
C3C4C5115.1°115.1°
C3C4H4122.5°122.5°
C3C2S1107.3°109.0°
C3C2C6131.5°125.5°
C5C4H4122.5°122.5°
C4C5S1109.1°111.2°
C4C5H5125.4°124.3°
S1C5H5125.5°124.4°
C5S1C295.9°91.7°
S1C2C6121.2°125.5°
C2C6O7119.4°120.0°
C2C6O8119.4°120.0°
O7C6O8121.2°120.0°
C6O8HO8109.5°114.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O11C10C12N9179.4°179.8°
O11C10C12H1291.6°90.1°
O11C10C12H12A148.4°150.0°
O11C10C12H12B28.4°30.0°
O11C10N9C38.7°5.5°
O11C10N9HN9171.3°174.6°
C10C12H12H12A120.0°119.9°
C10C12H12H12B120.0°120.1°
C10C12H12AH12B120.0°120.0°
C12C10N9C3172.0°174.3°
C12C10N9HN98.0°5.6°
N9C10C12H1289.0°89.7°
N9C10C12H12A31.0°30.2°
N9C10C12H12B151.0°150.2°
C10N9C3HN9180.0°179.9°
C10N9C3C429.3°6.4°
C10N9C3C2150.9°174.0°
H12C12H12AH12B120.0°120.0°
N9C3C4C2179.8°179.7°
N9C3C4C5180.0°180.0°
N9C3C4H40.0°0.1°
N9C3C2S1179.8°179.9°
N9C3C2C60.2°0.0°
HN9N9C3C4150.7°173.7°
HN9N9C3C229.1°5.9°
C3C4C5H4180.0°179.9°
C3C4C5S10.3°0.0°
C3C4C5H5179.6°180.0°
C4C3C2S10.0°0.4°
C4C3C2C6180.0°179.7°
C2C3C4C50.2°0.3°
C2C3C4H4179.8°179.8°
C3C2S1C50.2°0.3°
C3C2S1C6180.0°179.9°
C3C2C6O76.3°0.1°
C3C2C6O8173.8°180.0°
C4C5S1H5180.0°179.9°
C4C5S1C20.3°0.2°
H4C4C5S1179.7°180.0°
H4C4C5H50.4°0.1°
C5S1C2C6179.8°179.8°
H5C5S1C2179.7°179.8°
S1C2C6O7173.7°179.9°
S1C2C6O86.2°0.1°
C2C6O7O8179.9°179.9°
C2C6O8HO8180.0°180.0°
O7C6O8HO80.0°0.0°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon