GSP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PG | O3B | sing | 1.61Å | 1.66Å | |
| PG | S1G | doub | 1.86Å | 1.93Å | |
| PG | O2G | sing | 1.61Å | 1.51Å | |
| PG | O3G | sing | 1.61Å | 1.49Å | |
| O3B | PB | sing | 1.61Å | 1.59Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | HOG3 | sing | 0.97Å | 0.95Å | |
| PB | O1B | doub | 1.48Å | 1.46Å | |
| PB | O2B | sing | 1.61Å | 1.52Å | |
| PB | O3A | sing | 1.61Å | 1.62Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| PA | O1A | doub | 1.48Å | 1.47Å | |
| PA | O2A | sing | 1.61Å | 1.50Å | |
| PA | O3A | sing | 1.61Å | 1.63Å | |
| PA | O5' | sing | 1.61Å | 1.61Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| C5' | C4' | sing | 1.53Å | 1.48Å | |
| C5' | H5'1 | sing | 1.09Å | 1.11Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.54Å | 1.54Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.45Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.55Å | 1.55Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.41Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.12Å | |
| N9 | C8 | sing | 1.36Å | 1.39Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.35Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.28Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.35Å | 1.40Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.45Å | |
| C5 | C4 | doub | 1.40Å | 1.36Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.24Å | |
| C6 | N1 | sing | 1.35Å | 1.39Å | |
| N1 | C2 | sing | 1.36Å | 1.37Å | |
| N1 | HN1 | sing | 0.97Å | 1.02Å | |
| C2 | N2 | sing | 1.37Å | 1.31Å | |
| C2 | N3 | doub | 1.31Å | 1.33Å | |
| N2 | HN21 | sing | 0.97Å | 1.02Å | |
| N2 | HN22 | sing | 0.97Å | 1.02Å | |
| N3 | C4 | sing | 1.34Å | 1.35Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O3B | PG | S1G | 105.8° | 109.5° |
| O3B | PG | O2G | 106.1° | 109.5° |
| O3B | PG | O3G | 98.3° | 109.4° |
| PG | O3B | PB | 129.3° | 106.8° |
| S1G | PG | O2G | 120.0° | 109.5° |
| S1G | PG | O3G | 109.0° | 109.5° |
| O2G | PG | O3G | 114.9° | 109.5° |
| PG | O2G | HOG2 | 106.1° | 106.7° |
| PG | O3G | HOG3 | 98.3° | 106.8° |
| O3B | PB | O1B | 105.2° | 109.5° |
| O3B | PB | O2B | 114.1° | 109.5° |
| O3B | PB | O3A | 105.0° | 109.5° |
| O1B | PB | O2B | 116.5° | 109.5° |
| O1B | PB | O3A | 106.5° | 109.5° |
| O2B | PB | O3A | 108.7° | 109.5° |
| PB | O2B | HOB2 | 114.1° | 106.8° |
| PB | O3A | PA | 132.0° | 106.8° |
| O1A | PA | O2A | 118.5° | 109.5° |
| O1A | PA | O3A | 104.8° | 109.5° |
| O1A | PA | O5' | 109.6° | 109.5° |
| O2A | PA | O3A | 110.4° | 109.4° |
| O2A | PA | O5' | 110.7° | 109.5° |
| PA | O2A | HOA2 | 118.5° | 106.8° |
| O3A | PA | O5' | 101.4° | 109.5° |
| PA | O5' | C5' | 124.5° | 106.8° |
| O5' | C5' | C4' | 111.2° | 109.5° |
| O5' | C5' | H5'1 | 111.6° | 109.5° |
| O5' | C5' | H5'2 | 111.6° | 109.5° |
| C4' | C5' | H5'1 | 111.6° | 109.4° |
| C4' | C5' | H5'2 | 111.6° | 109.4° |
| C5' | C4' | O4' | 110.7° | 110.3° |
| C5' | C4' | C3' | 110.3° | 110.5° |
| C5' | C4' | H4' | 107.1° | 110.3° |
| H5'1 | C5' | H5'2 | 98.9° | 109.5° |
| O4' | C4' | C3' | 106.2° | 104.8° |
| O4' | C4' | H4' | 111.1° | 110.4° |
| C4' | O4' | C1' | 110.4° | 105.3° |
| C3' | C4' | H4' | 111.5° | 110.4° |
| C4' | C3' | O3' | 109.8° | 110.5° |
| C4' | C3' | C2' | 103.8° | 104.1° |
| C4' | C3' | H3' | 112.9° | 110.5° |
| O4' | C1' | C2' | 103.9° | 104.9° |
| O4' | C1' | N9 | 108.5° | 110.4° |
| O4' | C1' | H1' | 114.3° | 110.4° |
| O3' | C3' | C2' | 109.4° | 110.6° |
| O3' | C3' | H3' | 107.6° | 110.5° |
| C3' | O3' | HO3' | 109.8° | 106.8° |
| C2' | C3' | H3' | 113.2° | 110.6° |
| C3' | C2' | O2' | 112.0° | 110.5° |
| C3' | C2' | C1' | 102.4° | 104.0° |
| C3' | C2' | H2' | 112.8° | 110.5° |
| O2' | C2' | C1' | 110.3° | 110.8° |
| O2' | C2' | H2' | 105.1° | 110.4° |
| C2' | O2' | HO2' | 112.0° | 106.8° |
| C1' | C2' | H2' | 114.4° | 110.4° |
| C2' | C1' | N9 | 111.2° | 110.4° |
| C2' | C1' | H1' | 111.7° | 110.3° |
| N9 | C1' | H1' | 107.3° | 110.3° |
| C1' | N9 | C8 | 129.6° | 126.2° |
| C1' | N9 | C4 | 125.5° | 126.3° |
| C8 | N9 | C4 | 104.4° | 107.4° |
| N9 | C8 | N7 | 114.6° | 109.8° |
| N9 | C8 | H8 | 126.1° | 125.1° |
| N9 | C4 | C5 | 107.2° | 106.1° |
| N9 | C4 | N3 | 124.7° | 134.2° |
| N7 | C8 | H8 | 119.3° | 125.1° |
| C8 | N7 | C5 | 102.8° | 109.3° |
| N7 | C5 | C6 | 130.4° | 134.2° |
| N7 | C5 | C4 | 110.4° | 107.3° |
| C6 | C5 | C4 | 119.2° | 118.6° |
| C5 | C6 | O6 | 130.0° | 120.8° |
| C5 | C6 | N1 | 111.0° | 118.4° |
| C5 | C4 | N3 | 127.7° | 119.7° |
| O6 | C6 | N1 | 119.0° | 120.8° |
| C6 | N1 | C2 | 124.8° | 120.3° |
| C6 | N1 | HN1 | 118.5° | 119.9° |
| C2 | N1 | HN1 | 116.8° | 119.8° |
| N1 | C2 | N2 | 119.0° | 119.0° |
| N1 | C2 | N3 | 123.7° | 121.9° |
| N2 | C2 | N3 | 117.0° | 119.1° |
| C2 | N2 | HN21 | 119.0° | 119.9° |
| C2 | N2 | HN22 | 108.8° | 120.1° |
| C2 | N3 | C4 | 112.9° | 121.1° |
| HN21 | N2 | HN22 | 108.8° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O3B | PG | S1G | O2G | 119.7° | 120.0° |
| O3B | PG | S1G | O3G | 104.8° | 120.0° |
| O3B | PG | O2G | O3G | 107.4° | 120.0° |
| O3B | PG | O2G | HOG2 | 180.0° | 180.0° |
| O3B | PG | O3G | HOG3 | 180.0° | 60.0° |
| PG | O3B | PB | O1B | 99.9° | 60.0° |
| PG | O3B | PB | O2B | 29.0° | 60.0° |
| PG | O3B | PB | O3A | 147.9° | 180.0° |
| S1G | PG | O2G | O3G | 133.0° | 120.0° |
| S1G | PG | O3B | PB | 168.8° | 60.0° |
| S1G | PG | O2G | HOG2 | 60.4° | 60.0° |
| S1G | PG | O3G | HOG3 | 70.0° | 180.0° |
| O2G | PG | O3B | PB | 40.3° | 180.0° |
| O2G | PG | O3G | HOG3 | 67.9° | 60.0° |
| O3G | PG | O3B | PB | 78.7° | 60.0° |
| O3G | PG | O2G | HOG2 | 72.6° | 60.0° |
| O3B | PB | O1B | O2B | 127.5° | 120.0° |
| O3B | PB | O1B | O3A | 111.1° | 120.0° |
| O3B | PB | O2B | O3A | 116.8° | 120.0° |
| O3B | PB | O2B | HOB2 | 180.0° | 60.0° |
| O3B | PB | O3A | PA | 107.4° | 180.0° |
| O1B | PB | O2B | O3A | 120.3° | 120.0° |
| O1B | PB | O2B | HOB2 | 57.0° | 180.0° |
| O1B | PB | O3A | PA | 141.3° | 60.0° |
| O2B | PB | O3A | PA | 15.1° | 60.0° |
| O3A | PB | O2B | HOB2 | 63.2° | 60.0° |
| PB | O3A | PA | O1A | 70.5° | 60.0° |
| PB | O3A | PA | O2A | 58.2° | 60.0° |
| PB | O3A | PA | O5' | 175.5° | 180.0° |
| O1A | PA | O2A | O3A | 120.7° | 120.0° |
| O1A | PA | O2A | O5' | 127.9° | 120.0° |
| O1A | PA | O3A | O5' | 114.0° | 120.0° |
| O1A | PA | O2A | HOA2 | 180.0° | 180.0° |
| O1A | PA | O5' | C5' | 166.3° | 60.1° |
| O2A | PA | O3A | O5' | 117.3° | 120.0° |
| O2A | PA | O5' | C5' | 33.7° | 60.0° |
| O3A | PA | O2A | HOA2 | 59.3° | 60.0° |
| O3A | PA | O5' | C5' | 83.4° | 180.0° |
| O5' | PA | O2A | HOA2 | 52.2° | 60.0° |
| PA | O5' | C5' | C4' | 142.6° | 180.0° |
| PA | O5' | C5' | H5'1 | 17.4° | 60.0° |
| PA | O5' | C5' | H5'2 | 92.1° | 60.0° |
| O5' | C5' | C4' | H5'1 | 125.2° | 120.0° |
| O5' | C5' | C4' | H5'2 | 125.2° | 120.0° |
| O5' | C5' | H5'1 | H5'2 | 117.5° | 120.0° |
| O5' | C5' | C4' | O4' | 57.6° | 61.4° |
| O5' | C5' | C4' | C3' | 59.6° | 176.9° |
| O5' | C5' | C4' | H4' | 178.9° | 60.8° |
| C4' | C5' | H5'1 | H5'2 | 117.5° | 119.9° |
| C5' | C4' | O4' | C3' | 119.7° | 119.0° |
| C5' | C4' | O4' | H4' | 118.9° | 122.1° |
| C5' | C4' | C3' | H4' | 118.9° | 122.3° |
| C5' | C4' | O4' | C1' | 129.5° | 159.5° |
| C5' | C4' | C3' | O3' | 136.7° | 98.3° |
| C5' | C4' | C3' | C2' | 106.4° | 142.9° |
| C5' | C4' | C3' | H3' | 16.6° | 24.2° |
| H5'1 | C5' | C4' | O4' | 177.2° | 178.5° |
| H5'1 | C5' | C4' | C3' | 65.6° | 63.1° |
| H5'1 | C5' | C4' | H4' | 55.9° | 59.3° |
| H5'2 | C5' | C4' | O4' | 67.6° | 58.6° |
| H5'2 | C5' | C4' | C3' | 175.2° | 56.9° |
| H5'2 | C5' | C4' | H4' | 53.6° | 179.2° |
| O4' | C4' | C3' | H4' | 121.2° | 118.8° |
| O4' | C4' | C3' | O3' | 103.3° | 142.8° |
| O4' | C4' | C3' | C2' | 13.6° | 24.1° |
| O4' | C4' | C3' | H3' | 136.5° | 94.6° |
| C4' | O4' | C1' | C2' | 29.5° | 40.4° |
| C4' | O4' | C1' | N9 | 147.9° | 159.4° |
| C4' | O4' | C1' | H1' | 92.4° | 78.4° |
| C3' | C4' | O4' | C1' | 9.8° | 40.5° |
| C4' | C3' | O3' | C2' | 113.3° | 114.7° |
| C4' | C3' | O3' | H3' | 123.3° | 122.6° |
| C4' | C3' | C2' | H3' | 122.8° | 118.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | O2' | 148.5° | 118.8° |
| C4' | C3' | C2' | C1' | 30.3° | 0.1° |
| C4' | C3' | C2' | H2' | 93.1° | 118.6° |
| H4' | C4' | O4' | C1' | 111.6° | 78.4° |
| H4' | C4' | C3' | O3' | 17.8° | 24.0° |
| H4' | C4' | C3' | C2' | 134.7° | 94.8° |
| H4' | C4' | C3' | H3' | 102.3° | 146.5° |
| O4' | C1' | C2' | C3' | 36.4° | 23.8° |
| O4' | C1' | C2' | O2' | 155.9° | 142.6° |
| O4' | C1' | C2' | N9 | 116.5° | 118.9° |
| O4' | C1' | C2' | H1' | 123.7° | 118.9° |
| O4' | C1' | C2' | H2' | 85.9° | 94.7° |
| O4' | C1' | N9 | H1' | 123.9° | 122.2° |
| O4' | C1' | N9 | C8 | 56.4° | 27.1° |
| O4' | C1' | N9 | C4 | 114.4° | 153.0° |
| O3' | C3' | C2' | H3' | 120.0° | 122.7° |
| O3' | C3' | C2' | O2' | 31.3° | 0.1° |
| O3' | C3' | C2' | C1' | 86.9° | 118.8° |
| O3' | C3' | C2' | H2' | 149.7° | 122.7° |
| C2' | C3' | O3' | HO3' | 66.6° | 65.3° |
| C3' | C2' | O2' | C1' | 113.4° | 114.7° |
| C3' | C2' | O2' | H2' | 122.8° | 122.6° |
| C3' | C2' | C1' | H2' | 122.3° | 118.6° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.4° |
| C3' | C2' | C1' | N9 | 153.0° | 142.8° |
| C3' | C2' | C1' | H1' | 87.2° | 95.0° |
| H3' | C3' | O3' | HO3' | 56.7° | 57.4° |
| H3' | C3' | C2' | O2' | 88.7° | 122.5° |
| H3' | C3' | C2' | C1' | 153.1° | 118.5° |
| H3' | C3' | C2' | H2' | 29.7° | 0.0° |
| O2' | C2' | C1' | H2' | 118.3° | 122.7° |
| O2' | C2' | C1' | N9 | 87.6° | 98.5° |
| O2' | C2' | C1' | H1' | 32.2° | 23.7° |
| C1' | C2' | O2' | HO2' | 66.6° | 176.1° |
| C2' | C1' | N9 | H1' | 122.4° | 122.2° |
| C2' | C1' | N9 | C8 | 57.2° | 88.5° |
| C2' | C1' | N9 | C4 | 131.9° | 91.4° |
| H2' | C2' | O2' | HO2' | 57.2° | 61.1° |
| H2' | C2' | C1' | N9 | 30.6° | 24.2° |
| H2' | C2' | C1' | H1' | 150.4° | 146.4° |
| C1' | N9 | C8 | C4 | 172.3° | 179.9° |
| C1' | N9 | C8 | N7 | 178.0° | 180.0° |
| C1' | N9 | C8 | H8 | 2.1° | 0.0° |
| C1' | N9 | C4 | C5 | 173.8° | 180.0° |
| C1' | N9 | C4 | N3 | 0.6° | 0.1° |
| H1' | C1' | N9 | C8 | 179.6° | 149.3° |
| H1' | C1' | N9 | C4 | 9.5° | 30.8° |
| N9 | C8 | N7 | H8 | 179.9° | 179.9° |
| N9 | C8 | N7 | C5 | 7.3° | 0.1° |
| C8 | N9 | C4 | C5 | 1.1° | 0.1° |
| C8 | N9 | C4 | N3 | 172.1° | 180.0° |
| C4 | N9 | C8 | N7 | 5.6° | 0.1° |
| C4 | N9 | C8 | H8 | 174.4° | 180.0° |
| N9 | C4 | C5 | N7 | 3.2° | 0.1° |
| N9 | C4 | C5 | C6 | 176.4° | 180.0° |
| N9 | C4 | C5 | N3 | 172.9° | 179.9° |
| N9 | C4 | N3 | C2 | 179.5° | 179.9° |
| C8 | N7 | C5 | C6 | 173.2° | 180.0° |
| C8 | N7 | C5 | C4 | 6.4° | 0.0° |
| H8 | C8 | N7 | C5 | 172.7° | 180.0° |
| N7 | C5 | C6 | C4 | 179.5° | 180.0° |
| N7 | C5 | C6 | O6 | 4.9° | 0.0° |
| N7 | C5 | C6 | N1 | 176.4° | 179.7° |
| N7 | C5 | C4 | N3 | 176.1° | 180.0° |
| C5 | C6 | O6 | N1 | 178.6° | 179.7° |
| C5 | C6 | N1 | C2 | 6.1° | 0.6° |
| C5 | C6 | N1 | HN1 | 173.9° | 180.0° |
| C6 | C5 | C4 | N3 | 3.5° | 0.0° |
| C4 | C5 | C6 | O6 | 174.6° | 179.9° |
| C4 | C5 | C6 | N1 | 4.1° | 0.3° |
| C5 | C4 | N3 | C2 | 8.8° | 0.0° |
| O6 | C6 | N1 | C2 | 172.8° | 179.7° |
| O6 | C6 | N1 | HN1 | 7.2° | 0.3° |
| C6 | N1 | C2 | HN1 | 180.0° | 179.4° |
| C6 | N1 | C2 | N2 | 174.2° | 179.7° |
| C6 | N1 | C2 | N3 | 0.7° | 0.6° |
| N1 | C2 | N2 | N3 | 173.9° | 179.7° |
| N1 | C2 | N2 | HN21 | 180.0° | 179.8° |
| N1 | C2 | N2 | HN22 | 54.7° | 0.6° |
| N1 | C2 | N3 | C4 | 6.6° | 0.3° |
| HN1 | N1 | C2 | N2 | 5.8° | 0.3° |
| HN1 | N1 | C2 | N3 | 179.2° | 180.0° |
| C2 | N2 | HN21 | HN22 | 125.2° | 179.6° |
| N2 | C2 | N3 | C4 | 167.0° | 180.0° |
| N3 | C2 | N2 | HN21 | 6.1° | 0.1° |
| N3 | C2 | N2 | HN22 | 119.1° | 179.7° |
