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GRC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N2C2sing1.37Å1.36Å
C2N1sing1.36Å1.38Å
C2N3doub1.31Å1.33Å
N1C6sing1.35Å1.39Å
N3C4sing1.34Å1.33Å
C6O6doub1.22Å1.23Å
C6C5sing1.41Å1.40Å
C4C5doub1.40Å1.36ÅAromatic
C4N9sing1.37Å1.37ÅAromatic
C2'C1'sing1.54Å1.52Å
C2'C3'sing1.54Å1.55Å
C1'N9sing1.46Å1.47Å
C1'O4'sing1.44Å1.43Å
C5N7sing1.36Å1.39ÅAromatic
N9C8sing1.37Å1.37ÅAromatic
O3'C3'sing1.43Å1.46Å
C3'C4'sing1.54Å1.53Å
O4'C4'sing1.44Å1.44Å
N7C8doub1.30Å1.30ÅAromatic
C4'C5'sing1.53Å1.51Å
O1BPBdoub1.48Å1.49Å
C5'O5'sing1.43Å1.43Å
O5'PAsing1.61Å1.59Å
PBO3Asing1.61Å1.53Å
PBO2Bsing1.61Å1.47Å
PBC3Bsing1.82Å1.86Å
O3APAsing1.61Å1.54Å
CL1C3Bsing1.80Å1.79Å
PAO2Adoub1.48Å1.49Å
PAO1Asing1.61Å1.49Å
C3BPGsing1.82Å1.84Å
O3GPGdoub1.48Å1.48Å
PGO1Gsing1.61Å1.51Å
PGO2Gsing1.61Å1.50Å
N1H1sing0.97Å1.00Å
N2H2sing0.97Å1.00Å
N2H3sing0.97Å1.00Å
C8H4sing1.08Å1.08Å
C1'H5sing1.09Å1.10Å
O1AH6sing0.97Å0.95Å
O1GH7sing0.97Å0.95Å
C2'H8sing1.09Å1.10Å
C2'H9sing1.09Å1.10Å
O2BH10sing0.97Å0.95Å
O2GH11sing0.97Å0.95Å
C3'H12sing1.09Å1.10Å
O3'H13sing0.97Å0.95Å
C3BH14sing1.09Å1.10Å
C4'H15sing1.09Å1.10Å
C5'H16sing1.09Å1.10Å
C5'H17sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2C2N1117.4°119.0°
N2C2N3119.6°119.1°
C2N2H2120.0°120.0°
C2N2H3120.0°120.0°
N1C2N3122.7°121.9°
C2N1C6124.1°120.3°
C2N1H1117.9°119.9°
C2N3C4112.9°121.1°
N1C6O6121.9°120.8°
N1C6C5112.5°118.4°
C6N1H1118.0°119.8°
N3C4C5128.6°119.7°
N3C4N9126.1°134.2°
O6C6C5125.0°120.8°
C6C5C4119.1°118.6°
C6C5N7129.2°134.2°
C5C4N9105.4°106.1°
C4C5N7111.6°107.3°
C4N9C1'126.1°126.3°
C4N9C8106.1°107.5°
C1'C2'C3'103.8°104.0°
C2'C1'N9107.7°110.4°
C2'C1'O4'107.4°104.8°
C2'C1'H5109.8°110.4°
C1'C2'H8110.9°110.6°
C1'C2'H9110.9°110.5°
C2'C3'O3'112.3°110.5°
C2'C3'C4'101.4°104.1°
C3'C2'H8110.8°110.5°
C3'C2'H9110.9°110.5°
C2'C3'H12109.4°110.5°
N9C1'O4'110.2°110.4°
C1'N9C8127.5°126.2°
N9C1'H5110.5°110.3°
C1'O4'C4'110.0°105.2°
O4'C1'H5111.1°110.4°
C5N7C8103.3°109.3°
N9C8N7113.6°109.8°
N9C8H4123.2°125.1°
O3'C3'C4'113.3°110.6°
O3'C3'H12110.6°110.5°
C3'O3'H13109.5°114.0°
C3'C4'O4'104.7°104.8°
C3'C4'C5'116.7°110.4°
C4'C3'H12109.5°110.5°
C3'C4'H15108.7°110.4°
O4'C4'C5'107.6°110.3°
O4'C4'H15109.9°110.4°
N7C8H4123.2°125.1°
C4'C5'O5'106.5°109.5°
C5'C4'H15109.1°110.3°
C4'C5'H16110.2°109.5°
C4'C5'H17110.2°109.5°
O1BPBO3A106.6°109.4°
O1BPBO2B114.2°109.4°
O1BPBC3B110.0°109.5°
C5'O5'PA121.6°123.0°
O5'C5'H16110.2°109.4°
O5'C5'H17110.2°109.4°
O5'PAO3A102.1°109.5°
O5'PAO2A107.6°109.5°
O5'PAO1A112.8°109.4°
O3APBO2B113.8°109.5°
O3APBC3B101.1°109.5°
PBO3APA134.0°134.0°
O2BPBC3B110.4°109.5°
PBO2BH10109.5°114.0°
PBC3BCL1112.0°109.5°
PBC3BPG114.3°109.5°
PBC3BH14108.2°109.5°
O3APAO2A108.9°109.5°
O3APAO1A106.2°109.5°
CL1C3BPG104.6°109.5°
CL1C3BH14109.0°109.5°
O2APAO1A118.0°109.5°
PAO1AH6109.5°114.0°
C3BPGO3G107.6°109.5°
C3BPGO1G104.9°109.5°
C3BPGO2G113.3°109.5°
PGC3BH14108.5°109.4°
O3GPGO1G108.9°109.4°
O3GPGO2G102.4°109.5°
O1GPGO2G119.4°109.5°
PGO1GH7109.5°114.0°
PGO2GH11109.5°114.0°
H2N2H3120.0°120.0°
H8C2'H9109.5°110.5°
H16C5'H17109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2C2N1N3173.5°179.9°
N2C2N1C6175.0°180.0°
N2C2N3C4175.9°180.0°
N2C2N1H15.0°0.2°
C2N2H2H3180.0°180.0°
C2N1C6H1180.0°179.9°
N1C2N3C42.5°0.1°
C2N1C6O6172.1°179.7°
C2N1C6C50.5°0.1°
N1C2N2H2173.7°0.1°
N1C2N2H36.3°180.0°
N3C2N1C61.5°0.1°
C2N3C4C51.8°0.0°
C2N3C4N9179.4°180.0°
N3C2N1H1178.4°179.7°
N3C2N2H20.0°180.0°
N3C2N2H3180.0°0.1°
N1C6O6C5170.5°179.6°
N1C6C5C41.2°0.1°
N1C6C5N7180.0°180.0°
N3C4C5C60.1°0.0°
N3C4C5N9179.0°180.0°
N3C4N9C1'6.6°0.1°
N3C4C5N7179.1°179.9°
N3C4N9C8179.9°180.0°
O6C6C5C4172.5°179.7°
O6C6C5N78.7°0.4°
O6C6N1H17.9°0.1°
C6C5C4N7179.0°179.9°
C6C5C4N9178.8°179.9°
C6C5N7C8179.8°180.0°
C5C6N1H1179.5°179.7°
C5C4N9C1'174.4°180.0°
C5C4N9C81.1°0.0°
C4C5N7C81.0°0.1°
C4N9C1'C2'93.9°88.1°
C4N9C1'C8171.8°179.9°
C4N9C1'O4'149.2°156.5°
N9C4C5N70.1°0.0°
C4N9C8N71.9°0.1°
C4N9C8H4178.1°179.9°
C4N9C1'H526.0°34.2°
C1'C2'C3'H8119.1°118.7°
C1'C2'C3'H9119.1°118.6°
C2'C1'N9O4'116.9°115.4°
C2'C1'N9H5119.9°122.3°
C2'C1'O4'H5120.1°118.9°
C2'C1'N9C877.9°91.8°
C1'C2'C3'O3'152.5°118.7°
C1'C2'C3'C4'31.3°0.0°
C2'C1'O4'C4'5.5°40.5°
C1'C2'H8H9122.6°122.7°
C1'C2'C3'H1284.3°118.6°
C3'C2'C1'N9101.7°142.9°
C3'C2'C1'O4'17.0°24.0°
C2'C3'O3'C4'114.2°114.7°
C2'C3'O3'H12122.5°122.6°
C2'C3'C4'H12115.5°118.6°
C2'C3'C4'O4'35.0°24.0°
C2'C3'C4'C5'153.8°142.8°
C3'C2'C1'H5137.9°94.9°
C3'C2'H8H9122.6°122.7°
C2'C3'O3'H13139.6°61.4°
C2'C3'C4'H1582.4°95.0°
N9C1'O4'H5122.9°122.2°
N9C1'O4'C4'122.6°159.4°
C1'N9C8N7175.0°180.0°
C1'N9C8H45.0°0.1°
N9C1'C2'H8139.3°98.5°
N9C1'C2'H917.4°24.2°
O4'C1'N9C839.0°23.6°
C1'O4'C4'C3'26.1°40.5°
C1'O4'C4'C5'150.8°159.3°
O4'C1'C2'H8102.1°142.6°
O4'C1'C2'H9136.1°94.7°
C1'O4'C4'H1590.5°78.4°
C5N7C8N91.7°0.1°
C5N7C8H4178.3°179.9°
N9C8N7H4180.0°179.8°
C8N9C1'H5162.2°145.9°
O3'C3'C4'H12124.0°122.7°
O3'C3'C4'O4'155.6°142.7°
O3'C3'C4'C5'85.7°98.5°
O3'C3'C2'H833.4°0.0°
O3'C3'C2'H988.4°122.6°
O3'C3'C4'H1538.1°23.7°
C3'C4'O4'C5'124.7°118.9°
C3'C4'O4'H15116.6°118.9°
C3'C4'C5'H15123.6°122.3°
C3'C4'C5'O5'53.1°175.0°
C4'C3'C2'H887.8°118.7°
C4'C3'C2'H9150.4°118.6°
C4'C3'O3'H13106.2°176.0°
C3'C4'C5'H16172.7°55.0°
C3'C4'C5'H1766.4°65.0°
O4'C4'C5'H15119.2°122.3°
O4'C4'C5'O5'64.0°69.6°
C4'O4'C1'H5114.6°78.5°
O4'C4'C3'H1280.5°94.6°
O4'C4'C5'H1655.5°170.5°
O4'C4'C5'H17176.4°50.4°
C4'C5'O5'H16119.5°120.0°
C4'C5'O5'H17119.6°120.0°
C4'C5'O5'PA126.7°179.9°
C5'C4'C3'H1238.2°24.2°
C4'C5'H16H17121.4°120.1°
O1BPBO3AO2B126.8°120.0°
O1BPBO3AC3B114.9°120.0°
O1BPBO2BC3B124.5°120.0°
O1BPBO3APA155.2°60.0°
O1BPBC3BCL120.1°60.0°
O1BPBC3BPG138.9°60.0°
O1BPBO2BH100.0°180.0°
O1BPBC3BH14100.1°180.0°
C5'O5'PAO3A67.4°175.0°
C5'O5'PAO2A178.1°54.9°
C5'O5'PAO1A46.2°65.1°
O5'C5'C4'H15176.8°52.8°
O5'C5'H16H17121.4°119.9°
O5'PAO3APB115.2°165.0°
O5'PAO3AO2A113.5°120.1°
O5'PAO3AO1A118.4°119.9°
O5'PAO2AO1A129.0°119.9°
O5'PAO1AH6126.5°60.0°
PAO5'C5'H16113.8°59.9°
PAO5'C5'H177.1°60.1°
O3APBO2BC3B112.8°120.0°
O3APBC3BCL1132.4°60.0°
PBO3APAO2A131.3°45.0°
PBO3APAO1A3.2°75.1°
O3APBC3BPG108.8°180.0°
O3APBO2BH10122.7°60.0°
O3APBC3BH1412.3°60.1°
O2BPBO3APA28.4°59.9°
O2BPBC3BCL1106.8°180.0°
O2BPBC3BPG12.0°60.0°
O2BPBC3BH14133.0°60.0°
C3BPBO3APA89.9°180.0°
PBC3BCL1PG124.4°120.0°
PBC3BCL1H14119.7°120.0°
PBC3BPGH14120.9°120.0°
PBC3BPGO3G78.6°59.9°
PBC3BPGO1G37.2°60.0°
PBC3BPGO2G168.9°180.0°
C3BPBO2BH10124.5°60.0°
O3APAO2AO1A121.1°120.0°
O3APAO1AH6122.4°60.0°
CL1C3BPGH14116.3°120.0°
CL1C3BPGO3G44.2°180.0°
CL1C3BPGO1G160.0°60.0°
CL1C3BPGO2G68.2°60.0°
O2APAO1AH60.0°180.0°
C3BPGO3GO1G113.1°120.0°
C3BPGO3GO2G119.6°120.1°
C3BPGO1GO2G128.2°120.0°
C3BPGO1GH7114.9°60.0°
C3BPGO2GH11115.5°180.0°
O3GPGO1GO2G116.9°120.0°
O3GPGO1GH70.0°180.0°
O3GPGO2GH110.0°60.0°
O3GPGC3BH14160.5°60.0°
O1GPGO2GH11120.2°60.0°
O1GPGC3BH1483.7°180.0°
O2GPGO1GH7116.9°60.1°
O2GPGC3BH1448.1°60.0°
H5C1'C2'H818.9°23.7°
H5C1'C2'H9103.0°146.4°
H8C2'C3'H12156.6°122.7°
H9C2'C3'H1234.8°0.0°
H12C3'O3'H1317.1°61.3°
H12C3'C4'H15162.1°146.4°
H15C4'C5'H1663.7°67.2°
H15C4'C5'H1757.2°172.7°

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PDB entries from 2024-07-17

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