GP2

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O6	C6	doub	1.22Å	1.23Å
C6	C5	sing	1.41Å	1.39Å
C6	N1	sing	1.35Å	1.39Å
C5	N7	sing	1.36Å	1.35Å	Aromatic
C5	C4	doub	1.40Å	1.39Å	Aromatic
N7	C8	doub	1.30Å	1.36Å	Aromatic
C4	N3	sing	1.34Å	1.37Å
C4	N9	sing	1.37Å	1.37Å	Aromatic
N3	C2	doub	1.31Å	1.38Å
C2	N1	sing	1.36Å	1.39Å
C2	N2	sing	1.37Å	1.33Å
N1	HN1	sing	0.97Å	1.02Å
N2	HN21	sing	0.97Å	1.02Å
N2	HN22	sing	0.97Å	1.02Å
N9	C8	sing	1.37Å	1.38Å	Aromatic
N9	C1'	sing	1.46Å	1.47Å
C8	H8	sing	1.08Å	1.10Å
C1'	C2'	sing	1.54Å	1.53Å
C1'	O4'	sing	1.44Å	1.41Å
C1'	H1'	sing	1.09Å	1.11Å
C2'	O2'	sing	1.43Å	1.43Å
C2'	C3'	sing	1.55Å	1.53Å
C2'	H1	sing	1.09Å	1.12Å
O2'	H2'	sing	0.97Å	0.95Å
C3'	O3'	sing	1.43Å	1.41Å
C3'	C4'	sing	1.54Å	1.54Å
C3'	H3'	sing	1.09Å	1.12Å
O3'	H2	sing	0.97Å	0.95Å
O4'	C4'	sing	1.44Å	1.42Å
C4'	C5'	sing	1.53Å	1.53Å
C4'	H4'	sing	1.09Å	1.11Å
C5'	O5'	sing	1.43Å	1.43Å
C5'	H5'1	sing	1.09Å	1.11Å
C5'	H5'2	sing	1.09Å	1.12Å
O5'	PA	sing	1.61Å	1.63Å
PA	O1A	doub	1.48Å	1.49Å
PA	O2A	sing	1.61Å	1.54Å
PA	C3A	sing	1.82Å	1.73Å
O2A	H2A	sing	0.97Å	0.95Å
C3A	PB	sing	1.82Å	1.72Å
C3A	H3A1	sing	1.09Å	1.11Å
C3A	H3A2	sing	1.09Å	1.11Å
PB	O1B	doub	1.48Å	1.49Å
PB	O3B	sing	1.61Å	1.54Å
PB	O2B	sing	1.61Å	1.54Å
O3B	H3B	sing	0.97Å	0.95Å
O2B	H2B	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O6	C6	C5	120.2°	120.8°
O6	C6	N1	119.9°	120.8°
C5	C6	N1	119.8°	118.3°
C6	C5	N7	133.5°	134.2°
C6	C5	C4	118.5°	118.6°
C6	N1	C2	120.9°	120.3°
C6	N1	HN1	119.5°	119.8°
N7	C5	C4	108.0°	107.3°
C5	N7	C8	108.7°	109.4°
C5	C4	N3	121.6°	119.7°
C5	C4	N9	107.2°	106.1°
N7	C8	N9	108.1°	109.8°
N7	C8	H8	125.5°	125.1°
N3	C4	N9	131.2°	134.2°
C4	N3	C2	119.9°	121.2°
C4	N9	C8	108.0°	107.5°
C4	N9	C1'	121.5°	126.3°
N3	C2	N1	119.3°	121.9°
N3	C2	N2	120.0°	119.1°
N1	C2	N2	120.2°	119.0°
C2	N1	HN1	119.6°	119.8°
C2	N2	HN21	120.0°	120.0°
C2	N2	HN22	108.4°	120.0°
HN21	N2	HN22	108.5°	120.0°
C8	N9	C1'	130.5°	126.2°
N9	C8	H8	126.5°	125.1°
N9	C1'	C2'	115.1°	110.4°
N9	C1'	O4'	113.3°	110.4°
N9	C1'	H1'	101.7°	110.3°
C2'	C1'	O4'	106.3°	104.9°
C2'	C1'	H1'	109.3°	110.4°
C1'	C2'	O2'	113.6°	110.7°
C1'	C2'	C3'	100.6°	104.0°
C1'	C2'	H1	114.9°	110.4°
O4'	C1'	H1'	111.3°	110.4°
C1'	O4'	C4'	106.2°	105.2°
O2'	C2'	C3'	115.3°	110.5°
O2'	C2'	H1	100.0°	110.5°
C2'	O2'	H2'	113.6°	106.8°
C3'	C2'	H1	113.2°	110.5°
C2'	C3'	O3'	109.9°	110.5°
C2'	C3'	C4'	104.2°	104.1°
C2'	C3'	H3'	112.4°	110.6°
O3'	C3'	C4'	109.1°	110.5°
O3'	C3'	H3'	107.9°	110.4°
C3'	O3'	H2	109.9°	106.8°
C4'	C3'	H3'	113.3°	110.5°
C3'	C4'	O4'	108.0°	104.8°
C3'	C4'	C5'	114.3°	110.5°
C3'	C4'	H4'	107.0°	110.4°
O4'	C4'	C5'	108.7°	110.4°
O4'	C4'	H4'	112.8°	110.4°
C5'	C4'	H4'	106.2°	110.3°
C4'	C5'	O5'	114.8°	109.5°
C4'	C5'	H5'1	110.3°	109.5°
C4'	C5'	H5'2	110.3°	109.4°
O5'	C5'	H5'1	110.3°	109.5°
O5'	C5'	H5'2	110.2°	109.4°
C5'	O5'	PA	116.1°	106.8°
H5'1	C5'	H5'2	100.0°	109.5°
O5'	PA	O1A	110.4°	109.5°
O5'	PA	O2A	114.7°	109.4°
O5'	PA	C3A	102.7°	109.5°
O1A	PA	O2A	109.6°	109.5°
O1A	PA	C3A	112.6°	109.5°
O2A	PA	C3A	106.8°	109.5°
PA	O2A	H2A	114.6°	106.8°
PA	C3A	PB	113.6°	109.5°
PA	C3A	H3A1	110.7°	109.4°
PA	C3A	H3A2	110.7°	109.4°
PB	C3A	H3A1	110.7°	109.5°
PB	C3A	H3A2	110.7°	109.5°
C3A	PB	O1B	113.1°	109.4°
C3A	PB	O3B	104.8°	109.5°
C3A	PB	O2B	107.4°	109.5°
H3A1	C3A	H3A2	99.6°	109.5°
O1B	PB	O3B	109.2°	109.4°
O1B	PB	O2B	109.5°	109.5°
O3B	PB	O2B	112.8°	109.5°
PB	O3B	H3B	104.8°	106.8°
PB	O2B	H2B	107.4°	106.8°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O6	C6	C5	N1	176.8°	179.7°
O6	C6	C5	N7	3.0°	0.0°
O6	C6	C5	C4	175.3°	179.9°
O6	C6	N1	C2	175.7°	179.8°
O6	C6	N1	HN1	4.3°	0.2°
C6	C5	N7	C4	178.4°	180.0°
C6	C5	N7	C8	179.2°	180.0°
C6	C5	C4	N3	1.5°	0.1°
C6	C5	C4	N9	179.2°	180.0°
C5	C6	N1	C2	1.1°	0.5°
C5	C6	N1	HN1	178.9°	179.9°
N1	C6	C5	N7	179.8°	179.7°
N1	C6	C5	C4	1.5°	0.2°
C6	N1	C2	N3	0.6°	0.5°
C6	N1	C2	HN1	180.0°	179.5°
C6	N1	C2	N2	172.4°	179.7°
N7	C5	C4	N3	179.8°	179.9°
N7	C5	C4	N9	0.5°	0.1°
C5	N7	C8	N9	0.7°	0.0°
C5	N7	C8	H8	179.3°	180.0°
C4	C5	N7	C8	0.7°	0.0°
C5	C4	N3	N9	179.1°	179.8°
C5	C4	N3	C2	1.0°	0.1°
C5	C4	N9	C8	0.1°	0.1°
C5	C4	N9	C1'	178.4°	180.0°
N7	C8	N9	C4	0.4°	0.1°
N7	C8	N9	H8	180.0°	180.0°
N7	C8	N9	C1'	178.6°	180.0°
C4	N3	C2	N1	0.6°	0.2°
C4	N3	C2	N2	172.4°	180.0°
N3	C4	N9	C8	179.3°	179.9°
N3	C4	N9	C1'	0.8°	0.1°
N9	C4	N3	C2	179.9°	179.9°
C4	N9	C8	C1'	178.2°	179.9°
C4	N9	C8	H8	179.6°	179.9°
C4	N9	C1'	C2'	145.6°	91.5°
C4	N9	C1'	O4'	91.8°	153.0°
C4	N9	C1'	H1'	27.7°	30.8°
N3	C2	N1	N2	171.8°	179.8°
N3	C2	N1	HN1	179.4°	180.0°
N3	C2	N2	HN21	180.0°	0.1°
N3	C2	N2	HN22	54.7°	179.7°
N1	C2	N2	HN21	8.2°	179.8°
N1	C2	N2	HN22	133.5°	0.5°
N2	C2	N1	HN1	7.5°	0.2°
C2	N2	HN21	HN22	125.2°	179.8°
C8	N9	C1'	C2'	32.4°	88.5°
C8	N9	C1'	O4'	90.2°	27.0°
C8	N9	C1'	H1'	150.4°	149.2°
C1'	N9	C8	H8	1.4°	0.0°
N9	C1'	C2'	O4'	126.3°	118.9°
N9	C1'	C2'	H1'	113.6°	122.2°
N9	C1'	O4'	H1'	113.8°	122.2°
N9	C1'	C2'	O2'	72.7°	98.5°
N9	C1'	C2'	C3'	163.5°	142.8°
N9	C1'	C2'	H1	41.6°	24.2°
N9	C1'	O4'	C4'	165.3°	159.4°
C2'	C1'	O4'	H1'	118.9°	118.9°
C1'	C2'	O2'	C3'	115.4°	114.7°
C1'	C2'	O2'	H1	122.9°	122.6°
C1'	C2'	C3'	H1	123.1°	118.5°
C1'	C2'	O2'	H2'	180.0°	176.2°
C1'	C2'	C3'	O3'	94.5°	118.8°
C1'	C2'	C3'	C4'	22.2°	0.1°
C1'	C2'	C3'	H3'	145.3°	118.6°
C2'	C1'	O4'	C4'	38.0°	40.5°
O4'	C1'	C2'	O2'	161.1°	142.6°
O4'	C1'	C2'	C3'	37.2°	23.9°
O4'	C1'	C2'	H1	84.7°	94.7°
C1'	O4'	C4'	C3'	22.5°	40.5°
C1'	O4'	C4'	C5'	146.9°	159.5°
C1'	O4'	C4'	H4'	95.5°	78.3°
H1'	C1'	C2'	O2'	40.9°	23.7°
H1'	C1'	C2'	C3'	82.9°	95.0°
H1'	C1'	C2'	H1	155.2°	146.4°
H1'	C1'	O4'	C4'	80.9°	78.5°
O2'	C2'	C3'	H1	114.3°	122.6°
O2'	C2'	C3'	O3'	28.1°	0.1°
O2'	C2'	C3'	C4'	144.9°	118.8°
O2'	C2'	C3'	H3'	92.1°	122.5°
C3'	C2'	O2'	H2'	64.7°	61.5°
C2'	C3'	O3'	C4'	113.7°	114.7°
C2'	C3'	O3'	H3'	122.9°	122.7°
C2'	C3'	C4'	H3'	122.5°	118.8°
C2'	C3'	O3'	H2	179.9°	65.3°
C2'	C3'	C4'	O4'	1.4°	24.1°
C2'	C3'	C4'	C5'	119.7°	143.0°
C2'	C3'	C4'	H4'	123.0°	94.7°
H1	C2'	O2'	H2'	57.0°	61.2°
H1	C2'	C3'	O3'	142.4°	122.7°
H1	C2'	C3'	C4'	100.9°	118.6°
H1	C2'	C3'	H3'	22.2°	0.1°
O3'	C3'	C4'	H3'	120.2°	122.5°
O3'	C3'	C4'	O4'	115.9°	142.8°
O3'	C3'	C4'	C5'	123.0°	98.3°
O3'	C3'	C4'	H4'	5.7°	24.0°
C4'	C3'	O3'	H2	66.4°	180.0°
C3'	C4'	O4'	C5'	124.5°	119.0°
C3'	C4'	O4'	H4'	118.0°	118.8°
C3'	C4'	C5'	H4'	117.7°	122.3°
C3'	C4'	C5'	O5'	107.6°	176.8°
C3'	C4'	C5'	H5'1	127.2°	63.1°
C3'	C4'	C5'	H5'2	17.7°	56.9°
H3'	C3'	O3'	H2	57.0°	57.4°
H3'	C3'	C4'	O4'	123.9°	94.7°
H3'	C3'	C4'	C5'	2.8°	24.2°
H3'	C3'	C4'	H4'	114.4°	146.5°
O4'	C4'	C5'	H4'	121.6°	122.2°
O4'	C4'	C5'	O5'	13.1°	61.4°
O4'	C4'	C5'	H5'1	112.2°	178.6°
O4'	C4'	C5'	H5'2	138.3°	58.5°
C4'	C5'	O5'	H5'1	125.3°	120.0°
C4'	C5'	O5'	H5'2	125.2°	119.9°
C4'	C5'	H5'1	H5'2	116.1°	120.0°
C4'	C5'	O5'	PA	158.1°	180.0°
H4'	C4'	C5'	O5'	134.7°	60.8°
H4'	C4'	C5'	H5'1	9.5°	59.2°
H4'	C4'	C5'	H5'2	100.1°	179.2°
O5'	C5'	H5'1	H5'2	116.1°	120.0°
C5'	O5'	PA	O1A	91.7°	59.9°
C5'	O5'	PA	O2A	143.9°	60.1°
C5'	O5'	PA	C3A	28.5°	179.9°
H5'1	C5'	O5'	PA	76.6°	59.9°
H5'2	C5'	O5'	PA	32.9°	60.1°
O5'	PA	O1A	O2A	127.2°	119.9°
O5'	PA	O1A	C3A	114.1°	120.1°
O5'	PA	O2A	C3A	113.0°	120.0°
O5'	PA	O2A	H2A	179.9°	60.0°
O5'	PA	C3A	PB	135.0°	180.0°
O5'	PA	C3A	H3A1	99.7°	60.0°
O5'	PA	C3A	H3A2	9.8°	59.9°
O1A	PA	O2A	C3A	122.2°	120.0°
O1A	PA	O2A	H2A	55.2°	180.0°
O1A	PA	C3A	PB	16.4°	60.0°
O1A	PA	C3A	H3A1	141.6°	60.1°
O1A	PA	C3A	H3A2	108.9°	180.0°
O2A	PA	C3A	PB	103.9°	60.0°
O2A	PA	C3A	H3A1	21.3°	180.0°
O2A	PA	C3A	H3A2	130.8°	60.0°
C3A	PA	O2A	H2A	67.0°	60.0°
PA	C3A	PB	H3A1	125.3°	120.0°
PA	C3A	PB	H3A2	125.2°	120.0°
PA	C3A	H3A1	H3A2	116.6°	119.9°
PA	C3A	PB	O1B	45.0°	60.0°
PA	C3A	PB	O3B	163.8°	180.0°
PA	C3A	PB	O2B	76.0°	60.0°
PB	C3A	H3A1	H3A2	116.6°	120.0°
C3A	PB	O1B	O3B	116.3°	120.0°
C3A	PB	O1B	O2B	119.8°	120.0°
C3A	PB	O3B	O2B	116.5°	120.0°
C3A	PB	O3B	H3B	180.0°	180.0°
C3A	PB	O2B	H2B	179.9°	60.1°
H3A1	C3A	PB	O1B	170.3°	180.0°
H3A1	C3A	PB	O3B	70.9°	60.0°
H3A1	C3A	PB	O2B	49.3°	60.0°
H3A2	C3A	PB	O1B	80.2°	60.0°
H3A2	C3A	PB	O3B	38.6°	60.0°
H3A2	C3A	PB	O2B	158.8°	180.0°
O1B	PB	O3B	O2B	122.0°	120.0°
O1B	PB	O3B	H3B	58.5°	60.0°
O1B	PB	O2B	H2B	56.7°	180.0°
O3B	PB	O2B	H2B	65.1°	60.0°
O2B	PB	O3B	H3B	63.5°	60.0°

Definition date:	2004-01-14
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1S1D