GOX
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | N1 | doub | 1.29Å | 1.34Å | |
C1 | C2 | sing | 1.51Å | 1.54Å | |
C1 | N5 | sing | 1.39Å | 1.36Å | |
N1 | O7 | sing | 1.42Å | 1.31Å | |
C2 | O2 | sing | 1.43Å | 1.43Å | |
C2 | C3 | sing | 1.53Å | 1.51Å | |
C2 | HC2 | sing | 1.09Å | 1.12Å | |
N5 | C5 | sing | 1.47Å | 1.46Å | |
N5 | HN5 | sing | 0.97Å | 1.02Å | |
O7 | HO7 | sing | 0.97Å | 0.95Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C3 | O3 | sing | 1.43Å | 1.43Å | |
C3 | C4 | sing | 1.53Å | 1.55Å | |
C3 | HC3 | sing | 1.09Å | 1.11Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
C4 | O4 | sing | 1.43Å | 1.43Å | |
C4 | C5 | sing | 1.53Å | 1.57Å | |
C4 | HC4 | sing | 1.09Å | 1.12Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
C5 | C6 | sing | 1.53Å | 1.51Å | |
C5 | HC5 | sing | 1.09Å | 1.12Å | |
C6 | O6 | sing | 1.43Å | 1.44Å | |
C6 | HC61 | sing | 1.09Å | 1.12Å | |
C6 | HC62 | sing | 1.09Å | 1.11Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N1 | C1 | C2 | 118.0° | 121.3° |
N1 | C1 | N5 | 115.2° | 121.2° |
C1 | N1 | O7 | 122.6° | 120.0° |
C2 | C1 | N5 | 126.8° | 117.4° |
C1 | C2 | O2 | 115.8° | 109.7° |
C1 | C2 | C3 | 109.7° | 108.4° |
C1 | C2 | HC2 | 106.5° | 109.6° |
C1 | N5 | C5 | 119.7° | 117.6° |
C1 | N5 | HN5 | 108.5° | 121.2° |
N1 | O7 | HO7 | 122.6° | 114.1° |
O2 | C2 | C3 | 114.0° | 109.7° |
O2 | C2 | HC2 | 101.4° | 109.6° |
C2 | O2 | HO2 | 115.8° | 114.1° |
C3 | C2 | HC2 | 108.7° | 109.7° |
C2 | C3 | O3 | 105.4° | 109.5° |
C2 | C3 | C4 | 107.0° | 109.3° |
C2 | C3 | HC3 | 115.0° | 109.5° |
C5 | N5 | HN5 | 108.6° | 121.3° |
N5 | C5 | C4 | 105.8° | 108.8° |
N5 | C5 | C6 | 103.9° | 109.6° |
N5 | C5 | HC5 | 118.7° | 109.6° |
O3 | C3 | C4 | 113.5° | 109.5° |
O3 | C3 | HC3 | 108.8° | 109.5° |
C3 | O3 | HO3 | 105.4° | 114.0° |
C4 | C3 | HC3 | 107.2° | 109.6° |
C3 | C4 | O4 | 109.8° | 109.4° |
C3 | C4 | C5 | 106.8° | 109.4° |
C3 | C4 | HC4 | 110.0° | 109.5° |
O4 | C4 | C5 | 106.4° | 109.7° |
O4 | C4 | HC4 | 110.4° | 109.5° |
C4 | O4 | HO4 | 109.8° | 114.0° |
C5 | C4 | HC4 | 113.2° | 109.3° |
C4 | C5 | C6 | 118.1° | 109.6° |
C4 | C5 | HC5 | 104.6° | 109.5° |
C6 | C5 | HC5 | 106.5° | 109.7° |
C5 | C6 | O6 | 111.5° | 109.5° |
C5 | C6 | HC61 | 111.4° | 109.5° |
C5 | C6 | HC62 | 111.4° | 109.5° |
O6 | C6 | HC61 | 111.4° | 109.5° |
O6 | C6 | HC62 | 111.5° | 109.5° |
C6 | O6 | HO6 | 111.6° | 114.0° |
HC61 | C6 | HC62 | 98.9° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N1 | C1 | C2 | N5 | 179.7° | 179.7° |
N1 | C1 | C2 | O2 | 39.4° | 107.7° |
N1 | C1 | C2 | C3 | 170.1° | 132.6° |
N1 | C1 | C2 | HC2 | 72.4° | 12.8° |
N1 | C1 | N5 | C5 | 173.8° | 133.5° |
N1 | C1 | N5 | HN5 | 48.5° | 46.5° |
C1 | N1 | O7 | HO7 | 180.0° | 180.0° |
C2 | C1 | N1 | O7 | 172.6° | 180.0° |
C1 | C2 | O2 | C3 | 128.7° | 119.0° |
C1 | C2 | O2 | HC2 | 114.8° | 120.4° |
C1 | C2 | C3 | HC2 | 116.1° | 119.7° |
C2 | C1 | N5 | C5 | 6.5° | 46.2° |
C2 | C1 | N5 | HN5 | 131.8° | 133.8° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
C1 | C2 | C3 | O3 | 162.8° | 65.1° |
C1 | C2 | C3 | C4 | 41.6° | 54.8° |
C1 | C2 | C3 | HC3 | 77.4° | 174.8° |
N5 | C1 | N1 | O7 | 7.1° | 0.3° |
N5 | C1 | C2 | O2 | 140.9° | 72.6° |
N5 | C1 | C2 | C3 | 10.2° | 47.2° |
N5 | C1 | C2 | HC2 | 107.3° | 166.9° |
C1 | N5 | C5 | HN5 | 125.2° | 180.0° |
C1 | N5 | C5 | C4 | 33.6° | 49.5° |
C1 | N5 | C5 | C6 | 158.6° | 70.4° |
C1 | N5 | C5 | HC5 | 83.4° | 169.2° |
O2 | C2 | C3 | HC2 | 112.3° | 120.5° |
O2 | C2 | C3 | O3 | 65.6° | 175.1° |
O2 | C2 | C3 | C4 | 173.3° | 65.0° |
O2 | C2 | C3 | HC3 | 54.3° | 55.1° |
C3 | C2 | O2 | HO2 | 51.4° | 179.0° |
C2 | C3 | O3 | C4 | 116.8° | 119.8° |
C2 | C3 | O3 | HC3 | 123.9° | 120.0° |
C2 | C3 | C4 | HC3 | 123.9° | 120.0° |
C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
C2 | C3 | C4 | O4 | 172.4° | 57.6° |
C2 | C3 | C4 | C5 | 72.5° | 62.7° |
C2 | C3 | C4 | HC4 | 50.7° | 177.6° |
HC2 | C2 | O2 | HO2 | 65.2° | 60.5° |
HC2 | C2 | C3 | O3 | 46.7° | 54.6° |
HC2 | C2 | C3 | C4 | 74.5° | 174.5° |
HC2 | C2 | C3 | HC3 | 166.5° | 65.5° |
N5 | C5 | C4 | C3 | 66.5° | 57.2° |
N5 | C5 | C4 | O4 | 176.2° | 62.9° |
N5 | C5 | C4 | C6 | 115.7° | 119.8° |
N5 | C5 | C4 | HC5 | 126.1° | 119.8° |
N5 | C5 | C4 | HC4 | 54.7° | 177.0° |
N5 | C5 | C6 | HC5 | 126.1° | 120.4° |
N5 | C5 | C6 | O6 | 58.1° | 67.1° |
N5 | C5 | C6 | HC61 | 67.1° | 172.9° |
N5 | C5 | C6 | HC62 | 176.6° | 52.9° |
HN5 | N5 | C5 | C4 | 158.8° | 130.5° |
HN5 | N5 | C5 | C6 | 76.2° | 109.7° |
HN5 | N5 | C5 | HC5 | 41.8° | 10.8° |
O3 | C3 | C4 | HC3 | 120.2° | 120.1° |
O3 | C3 | C4 | O4 | 56.6° | 177.5° |
O3 | C3 | C4 | C5 | 171.6° | 57.2° |
O3 | C3 | C4 | HC4 | 65.1° | 62.6° |
C4 | C3 | O3 | HO3 | 63.2° | 179.8° |
C3 | C4 | O4 | C5 | 115.2° | 120.1° |
C3 | C4 | O4 | HC4 | 121.5° | 120.0° |
C3 | C4 | C5 | HC4 | 121.2° | 119.9° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
C3 | C4 | C5 | C6 | 177.8° | 62.7° |
C3 | C4 | C5 | HC5 | 59.6° | 176.9° |
HC3 | C3 | O3 | HO3 | 56.1° | 60.0° |
HC3 | C3 | C4 | O4 | 63.6° | 62.4° |
HC3 | C3 | C4 | C5 | 51.4° | 177.4° |
HC3 | C3 | C4 | HC4 | 174.7° | 57.6° |
O4 | C4 | C5 | HC4 | 121.5° | 120.1° |
O4 | C4 | C5 | C6 | 60.5° | 177.2° |
O4 | C4 | C5 | HC5 | 57.7° | 56.9° |
C5 | C4 | O4 | HO4 | 64.7° | 180.0° |
C4 | C5 | C6 | HC5 | 117.2° | 120.3° |
C4 | C5 | C6 | O6 | 58.6° | 173.6° |
C4 | C5 | C6 | HC61 | 176.2° | 53.5° |
C4 | C5 | C6 | HC62 | 66.7° | 66.4° |
HC4 | C4 | O4 | HO4 | 58.5° | 60.0° |
HC4 | C4 | C5 | C6 | 60.9° | 57.2° |
HC4 | C4 | C5 | HC5 | 179.2° | 63.2° |
C5 | C6 | O6 | HC61 | 125.2° | 120.0° |
C5 | C6 | O6 | HC62 | 125.3° | 120.0° |
C5 | C6 | HC61 | HC62 | 117.3° | 120.0° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
HC5 | C5 | C6 | O6 | 175.8° | 53.3° |
HC5 | C5 | C6 | HC61 | 59.0° | 66.8° |
HC5 | C5 | C6 | HC62 | 50.5° | 173.3° |
O6 | C6 | HC61 | HC62 | 117.4° | 120.0° |
HC61 | C6 | O6 | HO6 | 54.7° | 59.9° |
HC62 | C6 | O6 | HO6 | 54.8° | 60.0° |