GNP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PG | O1G | doub | 1.48Å | 1.50Å | |
| PG | O2G | sing | 1.61Å | 1.52Å | |
| PG | O3G | sing | 1.61Å | 1.48Å | |
| PG | N3B | sing | 1.68Å | 1.73Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | HOG3 | sing | 0.97Å | 0.95Å | |
| N3B | PB | sing | 1.68Å | 1.68Å | |
| N3B | HNB3 | sing | 1.01Å | 1.02Å | |
| PB | O1B | doub | 1.48Å | 1.46Å | |
| PB | O2B | sing | 1.61Å | 1.49Å | |
| PB | O3A | sing | 1.61Å | 1.63Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| O3A | PA | sing | 1.61Å | 1.55Å | |
| PA | O1A | doub | 1.48Å | 1.48Å | |
| PA | O2A | sing | 1.61Å | 1.51Å | |
| PA | O5' | sing | 1.61Å | 1.52Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| C5' | C4' | sing | 1.53Å | 1.50Å | |
| C5' | H5'2 | sing | 1.09Å | 1.11Å | |
| C5' | H5'1 | sing | 1.09Å | 1.12Å | |
| C4' | O4' | sing | 1.44Å | 1.38Å | |
| C4' | C3' | sing | 1.55Å | 1.56Å | |
| C4' | H4' | sing | 1.09Å | 1.11Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.44Å | |
| C3' | C2' | sing | 1.55Å | 1.54Å | |
| C3' | H3' | sing | 1.09Å | 1.12Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.39Å | |
| C2' | C1' | sing | 1.54Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.12Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.11Å | |
| N9 | C8 | sing | 1.36Å | 1.46Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.35Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.10Å | |
| N7 | C5 | sing | 1.36Å | 1.49Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.45Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.35Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.18Å | |
| C6 | N1 | sing | 1.35Å | 1.36Å | Aromatic |
| N1 | C2 | sing | 1.36Å | 1.36Å | Aromatic |
| N1 | HN1 | sing | 0.97Å | 1.02Å | |
| C2 | N2 | sing | 1.37Å | 1.43Å | |
| C2 | N3 | doub | 1.31Å | 1.27Å | Aromatic |
| N2 | HN21 | sing | 0.97Å | 1.02Å | |
| N2 | HN22 | sing | 0.97Å | 1.02Å | |
| N3 | C4 | sing | 1.34Å | 1.34Å | Aromatic |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O2G | 109.7° | 109.5° |
| O1G | PG | O3G | 115.4° | 109.5° |
| O1G | PG | N3B | 100.6° | 109.5° |
| O2G | PG | O3G | 112.2° | 109.5° |
| O2G | PG | N3B | 108.2° | 109.4° |
| PG | O2G | HOG2 | 109.7° | 106.7° |
| O3G | PG | N3B | 109.9° | 109.5° |
| PG | O3G | HOG3 | 115.5° | 106.8° |
| PG | N3B | PB | 121.8° | 106.7° |
| PG | N3B | HNB3 | 107.8° | 106.7° |
| PB | N3B | HNB3 | 107.8° | 106.7° |
| N3B | PB | O1B | 109.6° | 109.5° |
| N3B | PB | O2B | 109.5° | 109.5° |
| N3B | PB | O3A | 100.9° | 109.5° |
| O1B | PB | O2B | 121.2° | 109.5° |
| O1B | PB | O3A | 105.9° | 109.5° |
| O2B | PB | O3A | 107.8° | 109.5° |
| PB | O2B | HOB2 | 109.5° | 106.8° |
| PB | O3A | PA | 129.7° | 106.8° |
| O3A | PA | O1A | 110.4° | 109.4° |
| O3A | PA | O2A | 108.8° | 109.4° |
| O3A | PA | O5' | 101.4° | 109.5° |
| O1A | PA | O2A | 122.2° | 109.5° |
| O1A | PA | O5' | 105.7° | 109.4° |
| O2A | PA | O5' | 106.2° | 109.5° |
| PA | O2A | HOA2 | 108.8° | 106.8° |
| PA | O5' | C5' | 121.9° | 106.8° |
| O5' | C5' | C4' | 109.8° | 109.5° |
| O5' | C5' | H5'2 | 112.1° | 109.5° |
| O5' | C5' | H5'1 | 112.0° | 109.5° |
| C4' | C5' | H5'2 | 112.1° | 109.5° |
| C4' | C5' | H5'1 | 112.1° | 109.5° |
| C5' | C4' | O4' | 116.8° | 110.4° |
| C5' | C4' | C3' | 112.1° | 110.5° |
| C5' | C4' | H4' | 100.9° | 110.4° |
| H5'2 | C5' | H5'1 | 98.3° | 109.5° |
| O4' | C4' | C3' | 105.0° | 104.8° |
| O4' | C4' | H4' | 108.7° | 110.4° |
| C4' | O4' | C1' | 111.4° | 105.3° |
| C3' | C4' | H4' | 113.7° | 110.3° |
| C4' | C3' | O3' | 111.0° | 110.5° |
| C4' | C3' | C2' | 101.6° | 104.1° |
| C4' | C3' | H3' | 113.4° | 110.5° |
| O4' | C1' | C2' | 106.8° | 104.9° |
| O4' | C1' | N9 | 108.7° | 110.4° |
| O4' | C1' | H1' | 112.1° | 110.3° |
| O3' | C3' | C2' | 109.1° | 110.6° |
| O3' | C3' | H3' | 106.5° | 110.5° |
| C3' | O3' | HO3' | 110.9° | 106.8° |
| C2' | C3' | H3' | 115.1° | 110.6° |
| C3' | C2' | O2' | 112.8° | 110.5° |
| C3' | C2' | C1' | 98.6° | 104.0° |
| C3' | C2' | H2' | 114.4° | 110.5° |
| O2' | C2' | C1' | 109.4° | 110.8° |
| O2' | C2' | H2' | 104.4° | 110.5° |
| C2' | O2' | HO2' | 112.8° | 106.8° |
| C1' | C2' | H2' | 117.5° | 110.4° |
| C2' | C1' | N9 | 110.6° | 110.4° |
| C2' | C1' | H1' | 110.3° | 110.4° |
| N9 | C1' | H1' | 108.4° | 110.3° |
| C1' | N9 | C8 | 123.5° | 126.3° |
| C1' | N9 | C4 | 128.7° | 126.3° |
| C8 | N9 | C4 | 107.8° | 107.5° |
| N9 | C8 | N7 | 109.7° | 109.8° |
| N9 | C8 | H8 | 129.4° | 125.1° |
| N9 | C4 | C5 | 108.1° | 106.1° |
| N9 | C4 | N3 | 124.1° | 134.2° |
| N7 | C8 | H8 | 120.9° | 125.1° |
| C8 | N7 | C5 | 104.4° | 109.3° |
| N7 | C5 | C6 | 128.3° | 134.1° |
| N7 | C5 | C4 | 109.1° | 107.3° |
| C6 | C5 | C4 | 121.7° | 118.6° |
| C5 | C6 | O6 | 129.9° | 120.8° |
| C5 | C6 | N1 | 109.7° | 118.3° |
| C5 | C4 | N3 | 127.8° | 119.7° |
| O6 | C6 | N1 | 119.8° | 120.8° |
| C6 | N1 | C2 | 118.6° | 120.3° |
| C6 | N1 | HN1 | 120.5° | 119.8° |
| C2 | N1 | HN1 | 120.9° | 119.8° |
| N1 | C2 | N2 | 108.4° | 119.0° |
| N1 | C2 | N3 | 135.3° | 121.9° |
| N2 | C2 | N3 | 116.3° | 119.1° |
| C2 | N2 | HN21 | 108.4° | 119.9° |
| C2 | N2 | HN22 | 112.6° | 120.0° |
| C2 | N3 | C4 | 105.8° | 121.1° |
| HN21 | N2 | HN22 | 112.7° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O2G | O3G | 129.7° | 120.1° |
| O1G | PG | O2G | N3B | 108.9° | 120.0° |
| O1G | PG | O3G | N3B | 112.8° | 120.0° |
| O1G | PG | O2G | HOG2 | 180.0° | 60.0° |
| O1G | PG | O3G | HOG3 | 179.9° | 180.0° |
| O1G | PG | N3B | PB | 170.2° | 60.0° |
| O1G | PG | N3B | HNB3 | 64.5° | 53.8° |
| O2G | PG | O3G | N3B | 120.4° | 119.9° |
| O2G | PG | O3G | HOG3 | 53.2° | 60.0° |
| O2G | PG | N3B | PB | 55.2° | 180.0° |
| O2G | PG | N3B | HNB3 | 179.6° | 66.2° |
| O3G | PG | O2G | HOG2 | 50.2° | 60.0° |
| O3G | PG | N3B | PB | 67.6° | 60.1° |
| O3G | PG | N3B | HNB3 | 57.6° | 173.8° |
| N3B | PG | O2G | HOG2 | 71.2° | 180.0° |
| N3B | PG | O3G | HOG3 | 67.2° | 60.0° |
| PG | N3B | PB | HNB3 | 125.2° | 113.7° |
| PG | N3B | PB | O1B | 81.6° | 60.0° |
| PG | N3B | PB | O2B | 53.6° | 60.0° |
| PG | N3B | PB | O3A | 167.0° | 180.0° |
| N3B | PB | O1B | O2B | 129.1° | 120.0° |
| N3B | PB | O1B | O3A | 108.0° | 120.0° |
| N3B | PB | O2B | O3A | 108.9° | 120.0° |
| N3B | PB | O2B | HOB2 | 179.9° | 60.0° |
| N3B | PB | O3A | PA | 98.1° | 180.0° |
| HNB3 | N3B | PB | O1B | 43.7° | 53.8° |
| HNB3 | N3B | PB | O2B | 178.9° | 173.7° |
| HNB3 | N3B | PB | O3A | 67.7° | 66.3° |
| O1B | PB | O2B | O3A | 122.0° | 120.0° |
| O1B | PB | O2B | HOB2 | 50.9° | 180.0° |
| O1B | PB | O3A | PA | 147.7° | 60.0° |
| O2B | PB | O3A | PA | 16.6° | 60.0° |
| O3A | PB | O2B | HOB2 | 71.2° | 60.0° |
| PB | O3A | PA | O1A | 70.1° | 60.0° |
| PB | O3A | PA | O2A | 66.6° | 60.0° |
| PB | O3A | PA | O5' | 178.2° | 180.0° |
| O3A | PA | O1A | O2A | 129.9° | 120.0° |
| O3A | PA | O1A | O5' | 108.9° | 120.0° |
| O3A | PA | O2A | O5' | 108.4° | 120.1° |
| O3A | PA | O2A | HOA2 | 180.0° | 60.0° |
| O3A | PA | O5' | C5' | 61.0° | 180.0° |
| O1A | PA | O2A | O5' | 121.0° | 120.0° |
| O1A | PA | O2A | HOA2 | 49.4° | 180.0° |
| O1A | PA | O5' | C5' | 176.3° | 60.0° |
| O2A | PA | O5' | C5' | 52.6° | 60.0° |
| O5' | PA | O2A | HOA2 | 71.6° | 60.0° |
| PA | O5' | C5' | C4' | 161.6° | 180.0° |
| PA | O5' | C5' | H5'2 | 36.3° | 60.0° |
| PA | O5' | C5' | H5'1 | 73.1° | 59.9° |
| O5' | C5' | C4' | H5'2 | 125.2° | 120.0° |
| O5' | C5' | C4' | H5'1 | 125.2° | 120.0° |
| O5' | C5' | H5'2 | H5'1 | 117.9° | 120.0° |
| O5' | C5' | C4' | O4' | 61.6° | 61.5° |
| O5' | C5' | C4' | C3' | 59.5° | 176.9° |
| O5' | C5' | C4' | H4' | 179.2° | 60.9° |
| C4' | C5' | H5'2 | H5'1 | 118.1° | 120.0° |
| C5' | C4' | O4' | C3' | 124.9° | 118.9° |
| C5' | C4' | O4' | H4' | 113.2° | 122.3° |
| C5' | C4' | C3' | H4' | 113.6° | 122.3° |
| C5' | C4' | O4' | C1' | 119.1° | 159.4° |
| C5' | C4' | C3' | O3' | 145.0° | 98.3° |
| C5' | C4' | C3' | C2' | 99.1° | 142.9° |
| C5' | C4' | C3' | H3' | 25.1° | 24.2° |
| H5'2 | C5' | C4' | O4' | 173.1° | 58.5° |
| H5'2 | C5' | C4' | C3' | 65.7° | 56.9° |
| H5'2 | C5' | C4' | H4' | 55.6° | 179.2° |
| H5'1 | C5' | C4' | O4' | 63.6° | 178.5° |
| H5'1 | C5' | C4' | C3' | 175.3° | 63.1° |
| H5'1 | C5' | C4' | H4' | 53.9° | 59.2° |
| O4' | C4' | C3' | H4' | 118.6° | 118.8° |
| O4' | C4' | C3' | O3' | 87.3° | 142.8° |
| O4' | C4' | C3' | C2' | 28.7° | 24.1° |
| O4' | C4' | C3' | H3' | 152.9° | 94.7° |
| C4' | O4' | C1' | C2' | 20.5° | 40.4° |
| C4' | O4' | C1' | N9 | 139.8° | 159.4° |
| C4' | O4' | C1' | H1' | 100.4° | 78.4° |
| C3' | C4' | O4' | C1' | 5.8° | 40.5° |
| C4' | C3' | O3' | C2' | 111.2° | 114.7° |
| C4' | C3' | O3' | H3' | 123.9° | 122.6° |
| C4' | C3' | C2' | H3' | 123.0° | 118.6° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | O2' | 153.7° | 118.8° |
| C4' | C3' | C2' | C1' | 38.4° | 0.1° |
| C4' | C3' | C2' | H2' | 87.1° | 118.6° |
| H4' | C4' | O4' | C1' | 127.7° | 78.3° |
| H4' | C4' | C3' | O3' | 31.4° | 23.9° |
| H4' | C4' | C3' | C2' | 147.3° | 94.8° |
| H4' | C4' | C3' | H3' | 88.5° | 146.5° |
| O4' | C1' | C2' | C3' | 36.9° | 23.8° |
| O4' | C1' | C2' | O2' | 154.8° | 142.6° |
| O4' | C1' | C2' | N9 | 118.1° | 118.9° |
| O4' | C1' | C2' | H1' | 122.0° | 118.8° |
| O4' | C1' | C2' | H2' | 86.4° | 94.7° |
| O4' | C1' | N9 | H1' | 122.1° | 122.2° |
| O4' | C1' | N9 | C8 | 65.4° | 27.0° |
| O4' | C1' | N9 | C4 | 115.8° | 153.0° |
| O3' | C3' | C2' | H3' | 119.7° | 122.7° |
| O3' | C3' | C2' | O2' | 36.4° | 0.1° |
| O3' | C3' | C2' | C1' | 78.9° | 118.8° |
| O3' | C3' | C2' | H2' | 155.6° | 122.7° |
| C2' | C3' | O3' | HO3' | 68.8° | 65.3° |
| C3' | C2' | O2' | C1' | 108.6° | 114.8° |
| C3' | C2' | O2' | H2' | 124.8° | 122.6° |
| C3' | C2' | C1' | H2' | 123.3° | 118.6° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.5° |
| C3' | C2' | C1' | N9 | 155.0° | 142.8° |
| C3' | C2' | C1' | H1' | 85.2° | 95.0° |
| H3' | C3' | O3' | HO3' | 56.1° | 57.4° |
| H3' | C3' | C2' | O2' | 83.2° | 122.6° |
| H3' | C3' | C2' | C1' | 161.4° | 118.5° |
| H3' | C3' | C2' | H2' | 35.9° | 0.0° |
| O2' | C2' | C1' | H2' | 118.8° | 122.7° |
| O2' | C2' | C1' | N9 | 87.1° | 98.5° |
| O2' | C2' | C1' | H1' | 32.8° | 23.8° |
| C1' | C2' | O2' | HO2' | 71.4° | 176.2° |
| C2' | C1' | N9 | H1' | 121.0° | 122.3° |
| C2' | C1' | N9 | C8 | 51.6° | 88.5° |
| C2' | C1' | N9 | C4 | 127.2° | 91.5° |
| H2' | C2' | O2' | HO2' | 55.2° | 61.2° |
| H2' | C2' | C1' | N9 | 31.7° | 24.2° |
| H2' | C2' | C1' | H1' | 151.6° | 146.4° |
| C1' | N9 | C8 | C4 | 179.0° | 180.0° |
| C1' | N9 | C8 | N7 | 175.3° | 180.0° |
| C1' | N9 | C8 | H8 | 4.7° | 0.0° |
| C1' | N9 | C4 | C5 | 177.9° | 180.0° |
| C1' | N9 | C4 | N3 | 3.2° | 0.0° |
| H1' | C1' | N9 | C8 | 172.6° | 149.3° |
| H1' | C1' | N9 | C4 | 6.2° | 30.8° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 9.1° | 0.0° |
| C8 | N9 | C4 | C5 | 1.0° | 0.0° |
| C8 | N9 | C4 | N3 | 177.8° | 180.0° |
| C4 | N9 | C8 | N7 | 5.7° | 0.0° |
| C4 | N9 | C8 | H8 | 174.4° | 180.0° |
| N9 | C4 | C5 | N7 | 6.5° | 0.0° |
| N9 | C4 | C5 | C6 | 176.3° | 180.0° |
| N9 | C4 | C5 | N3 | 178.8° | 180.0° |
| N9 | C4 | N3 | C2 | 177.4° | 180.0° |
| C8 | N7 | C5 | C6 | 178.8° | 180.0° |
| C8 | N7 | C5 | C4 | 9.9° | 0.0° |
| H8 | C8 | N7 | C5 | 171.0° | 180.0° |
| N7 | C5 | C6 | C4 | 167.6° | 180.0° |
| N7 | C5 | C6 | O6 | 11.4° | 0.0° |
| N7 | C5 | C6 | N1 | 178.0° | 179.7° |
| N7 | C5 | C4 | N3 | 172.2° | 180.0° |
| C5 | C6 | O6 | N1 | 169.8° | 179.7° |
| C5 | C6 | N1 | C2 | 11.5° | 0.6° |
| C5 | C6 | N1 | HN1 | 168.5° | 180.0° |
| C6 | C5 | C4 | N3 | 2.5° | 0.0° |
| C4 | C5 | C6 | O6 | 179.1° | 180.0° |
| C4 | C5 | C6 | N1 | 10.3° | 0.3° |
| C5 | C4 | N3 | C2 | 4.0° | 0.0° |
| O6 | C6 | N1 | C2 | 176.8° | 179.7° |
| O6 | C6 | N1 | HN1 | 3.3° | 0.3° |
| C6 | N1 | C2 | HN1 | 180.0° | 179.3° |
| C6 | N1 | C2 | N2 | 176.4° | 179.7° |
| C6 | N1 | C2 | N3 | 6.4° | 0.6° |
| N1 | C2 | N2 | N3 | 177.7° | 179.7° |
| N1 | C2 | N2 | HN21 | 180.0° | 179.8° |
| N1 | C2 | N2 | HN22 | 54.7° | 0.6° |
| N1 | C2 | N3 | C4 | 2.2° | 0.3° |
| HN1 | N1 | C2 | N2 | 3.6° | 0.3° |
| HN1 | N1 | C2 | N3 | 173.6° | 180.0° |
| C2 | N2 | HN21 | HN22 | 125.2° | 179.7° |
| N2 | C2 | N3 | C4 | 174.7° | 180.0° |
| N3 | C2 | N2 | HN21 | 2.3° | 0.1° |
| N3 | C2 | N2 | HN22 | 123.0° | 179.7° |
