GNL

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	S1	sing	1.82Å	1.84Å
C1	C2	sing	1.52Å	1.56Å
C1	O5	sing	1.40Å	1.44Å
S1	C7	sing	1.77Å	1.81Å
C2	N2	sing	1.46Å	1.50Å
C2	C3	sing	1.52Å	1.56Å
N2	C7	doub	1.28Å	1.47Å
C3	O3	sing	1.43Å	1.44Å
C3	C4	sing	1.52Å	1.55Å
C4	O4	sing	1.43Å	1.44Å
C4	C5	sing	1.53Å	1.54Å
C5	O5	sing	1.42Å	1.46Å
C5	C6	sing	1.53Å	1.53Å
C6	O6	sing	1.43Å	1.43Å
C7	C8	sing	1.51Å	1.52Å
C1	H1	sing	1.09Å	1.10Å
C2	H2	sing	1.09Å	1.10Å
C3	H3	sing	1.09Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
C4	H4	sing	1.09Å	1.10Å
O4	HO4	sing	0.97Å	0.95Å
C5	H5	sing	1.09Å	1.10Å
C6	H6	sing	1.09Å	1.10Å
C6	H6A	sing	1.09Å	1.10Å
O6	HO6	sing	0.97Å	0.95Å
C8	H8	sing	1.09Å	1.10Å
C8	H8A	sing	1.09Å	1.10Å
C8	H8B	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
S1	C1	C2	103.3°	102.4°
S1	C1	O5	110.6°	111.9°
C1	S1	C7	95.8°	94.3°
S1	C1	H1	114.3°	108.0°
C2	C1	O5	113.9°	118.2°
C1	C2	N2	104.1°	109.2°
C1	C2	C3	113.9°	114.4°
C2	C1	H1	111.1°	108.2°
C1	C2	H2	111.4°	108.3°
C1	O5	C5	118.7°	118.3°
O5	C1	H1	103.9°	107.7°
S1	C7	N2	102.8°	109.7°
S1	C7	C8	112.2°	125.2°
N2	C2	C3	113.0°	108.8°
C2	N2	C7	108.8°	118.9°
N2	C2	H2	112.4°	108.2°
C2	C3	O3	111.2°	109.0°
C2	C3	C4	113.0°	112.1°
C3	C2	H2	102.3°	107.7°
C2	C3	H3	105.7°	109.0°
N2	C7	C8	113.1°	125.1°
O3	C3	C4	109.2°	108.9°
O3	C3	H3	109.8°	108.9°
C3	O3	HO3	109.5°	114.0°
C3	C4	O4	110.2°	109.7°
C3	C4	C5	109.1°	108.1°
C4	C3	H3	107.8°	108.9°
C3	C4	H4	109.3°	109.7°
O4	C4	C5	109.7°	109.8°
O4	C4	H4	108.7°	109.7°
C4	O4	HO4	109.5°	114.0°
C4	C5	O5	107.2°	107.8°
C4	C5	C6	114.0°	109.8°
C5	C4	H4	109.8°	109.8°
C4	C5	H5	107.5°	109.8°
O5	C5	C6	108.0°	109.7°
O5	C5	H5	113.5°	109.8°
C5	C6	O6	109.2°	109.5°
C6	C5	H5	106.7°	109.8°
C5	C6	H6	109.5°	109.4°
C5	C6	H6A	109.6°	109.5°
O6	C6	H6	109.6°	109.4°
O6	C6	H6A	109.6°	109.5°
C6	O6	HO6	109.5°	114.0°
C7	C8	H8	109.5°	109.4°
C7	C8	H8A	109.5°	109.5°
C7	C8	H8B	109.5°	109.5°
H6	C6	H6A	109.4°	109.5°
H8	C8	H8A	109.5°	109.5°
H8	C8	H8B	109.5°	109.5°
H8A	C8	H8B	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
S1	C1	C2	O5	120.1°	123.4°
S1	C1	C2	H1	123.0°	113.9°
S1	C1	O5	H1	123.1°	118.5°
S1	C1	C2	N2	36.3°	23.7°
S1	C1	C2	C3	87.2°	98.5°
C1	S1	C7	N2	18.1°	10.3°
S1	C1	O5	C5	69.8°	82.2°
C1	S1	C7	C8	140.0°	169.7°
S1	C1	C2	H2	157.7°	141.3°
C2	C1	O5	H1	121.0°	122.9°
C2	C1	S1	C7	10.7°	19.3°
C1	C2	N2	C3	124.1°	125.5°
C1	C2	N2	H2	120.7°	117.7°
C1	C2	C3	H2	120.4°	120.5°
C1	C2	N2	C7	54.6°	19.5°
C1	C2	C3	O3	162.4°	156.9°
C1	C2	C3	C4	39.1°	36.2°
C2	C1	O5	C5	46.0°	36.4°
C1	C2	C3	H3	78.6°	84.4°
O5	C1	S1	C7	133.0°	146.9°
O5	C1	C2	N2	156.4°	147.1°
O5	C1	C2	C3	32.9°	24.9°
C1	O5	C5	C4	61.0°	55.9°
C1	O5	C5	C6	175.6°	175.5°
O5	C1	C2	H2	82.2°	95.3°
C1	O5	C5	H5	57.6°	63.7°
S1	C7	N2	C2	44.6°	3.8°
S1	C7	N2	C8	121.2°	180.0°
C7	S1	C1	H1	110.2°	94.8°
S1	C7	C8	H8	0.0°	0.0°
S1	C7	C8	H8A	120.0°	120.0°
S1	C7	C8	H8B	120.0°	120.0°
N2	C2	C3	H2	121.1°	117.1°
N2	C2	C3	O3	79.1°	80.8°
N2	C2	C3	C4	157.6°	158.6°
C2	N2	C7	C8	165.8°	176.3°
N2	C2	C1	H1	86.7°	90.3°
N2	C2	C3	H3	40.0°	38.0°
C3	C2	N2	C7	69.5°	105.9°
C2	C3	O3	C4	125.4°	122.6°
C2	C3	O3	H3	116.6°	118.8°
C2	C3	C4	H3	116.4°	120.6°
C2	C3	C4	O4	66.2°	63.3°
C2	C3	C4	C5	54.3°	56.3°
C3	C2	C1	H1	149.8°	147.6°
C2	C3	O3	HO3	180.0°	180.0°
C2	C3	C4	H4	174.4°	176.0°
C7	N2	C2	H2	175.4°	137.3°
N2	C7	C8	H8	115.8°	179.9°
N2	C7	C8	H8A	4.3°	59.9°
N2	C7	C8	H8B	124.2°	60.1°
O3	C3	C4	H3	119.2°	118.7°
O3	C3	C4	O4	58.2°	57.3°
O3	C3	C4	C5	178.7°	177.0°
O3	C3	C2	H2	42.0°	36.4°
O3	C3	C4	H4	61.2°	63.3°
C3	C4	O4	C5	120.1°	118.7°
C3	C4	O4	H4	119.8°	120.6°
C3	C4	C5	H4	119.8°	119.7°
C3	C4	C5	O5	62.3°	64.7°
C3	C4	C5	C6	178.2°	175.8°
C4	C3	C2	H2	81.3°	84.3°
C4	C3	O3	HO3	54.6°	57.4°
C3	C4	O4	HO4	180.0°	180.0°
C3	C4	C5	H5	60.2°	54.9°
O4	C4	C5	H4	119.5°	120.7°
O4	C4	C5	O5	58.5°	54.9°
O4	C4	C5	C6	61.1°	64.6°
O4	C4	C3	H3	177.4°	176.0°
O4	C4	C5	H5	179.1°	174.5°
C4	C5	O5	C6	123.3°	119.6°
C4	C5	O5	H5	118.6°	119.6°
C4	C5	C6	H5	118.5°	120.9°
C4	C5	C6	O6	171.5°	175.0°
C5	C4	C3	H3	62.1°	64.3°
C5	C4	O4	HO4	60.0°	61.4°
C4	C5	C6	H6	51.5°	55.0°
C4	C5	C6	H6A	68.5°	65.0°
O5	C5	C6	H5	122.4°	120.8°
O5	C5	C6	O6	69.4°	66.7°
C5	O5	C1	H1	167.1°	159.3°
O5	C5	C4	H4	177.9°	175.6°
O5	C5	C6	H6	170.6°	173.3°
O5	C5	C6	H6A	50.6°	53.3°
C5	C6	O6	H6	120.0°	120.0°
C5	C6	O6	H6A	120.0°	120.0°
C6	C5	C4	H4	58.4°	56.1°
C5	C6	H6	H6A	120.1°	120.0°
C5	C6	O6	HO6	180.0°	180.0°
O6	C6	C5	H5	53.0°	54.1°
O6	C6	H6	H6A	120.1°	120.0°
C7	C8	H8	H8A	120.0°	120.0°
C7	C8	H8	H8B	120.0°	120.0°
C7	C8	H8A	H8B	120.0°	120.0°
H1	C1	C2	H2	34.7°	27.4°
H2	C2	C3	H3	161.0°	155.1°
H3	C3	O3	HO3	63.4°	61.2°
H3	C3	C4	H4	58.0°	55.4°
H4	C4	O4	HO4	60.2°	59.4°
H4	C4	C5	H5	59.6°	64.8°
H5	C5	C6	H6	67.0°	65.8°
H5	C5	C6	H6A	173.0°	174.2°
H6	C6	O6	HO6	60.0°	60.0°
H6A	C6	O6	HO6	60.0°	60.0°
H8	C8	H8A	H8B	120.0°	120.0°

Definition date:	2011-08-11
Last modified:	2012-06-01
Release status:	REL
Processing site:	PDBJ
Derived from:	3SUS