GNH

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N3B	PB	sing	1.68Å	1.66Å
N3B	HN31	sing	1.01Å	1.05Å
N3B	HN32	sing	1.01Å	1.03Å
PB	O1B	doub	1.48Å	1.50Å
PB	O2B	sing	1.61Å	1.47Å
PB	O3A	sing	1.61Å	1.61Å
O2B	HOB2	sing	0.97Å	0.95Å
O3A	PA	sing	1.61Å	1.61Å
PA	O1A	doub	1.48Å	1.49Å
PA	O2A	sing	1.61Å	1.49Å
PA	O5'	sing	1.61Å	1.62Å
O2A	HOA2	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.39Å
C5'	C4'	sing	1.53Å	1.47Å
C5'	H5'2	sing	1.09Å	1.09Å
C5'	H5'1	sing	1.09Å	1.08Å
C4'	O4'	sing	1.44Å	1.42Å
C4'	C3'	sing	1.54Å	1.52Å
C4'	H4'	sing	1.09Å	1.09Å
O4'	C1'	sing	1.44Å	1.43Å
C3'	O3'	sing	1.43Å	1.43Å
C3'	C2'	sing	1.55Å	1.58Å
C3'	H3'	sing	1.09Å	1.09Å
O3'	HO3'	sing	0.97Å	0.96Å
C2'	O2'	sing	1.43Å	1.45Å
C2'	C1'	sing	1.54Å	1.53Å
C2'	H2'	sing	1.09Å	1.09Å
O2'	HO2'	sing	0.97Å	0.97Å
C1'	N9	sing	1.46Å	1.39Å
C1'	H1'	sing	1.09Å	1.09Å
N9	C8	sing	1.37Å	1.37Å	Aromatic
N9	C4	sing	1.37Å	1.35Å	Aromatic
C8	N7	doub	1.30Å	1.30Å	Aromatic
C8	H8	sing	1.08Å	1.09Å
N7	C5	sing	1.35Å	1.39Å	Aromatic
C5	C6	sing	1.42Å	1.45Å	Aromatic
C5	C4	doub	1.40Å	1.39Å	Aromatic
C6	O6	doub	1.22Å	1.23Å
C6	N1	sing	1.35Å	1.39Å	Aromatic
N1	C2	sing	1.36Å	1.38Å	Aromatic
N1	HN1	sing	0.97Å	1.01Å
C2	N2	sing	1.37Å	1.33Å
C2	N3	doub	1.31Å	1.35Å	Aromatic
N2	HN21	sing	0.97Å	0.98Å
N2	HN22	sing	0.97Å	0.98Å
N3	C4	sing	1.34Å	1.33Å	Aromatic

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
PB	N3B	HN31	115.3°	106.8°
PB	N3B	HN32	128.9°	106.7°
N3B	PB	O1B	114.6°	109.5°
N3B	PB	O2B	112.3°	109.5°
N3B	PB	O3A	93.9°	109.4°
HN31	N3B	HN32	115.5°	106.7°
O1B	PB	O2B	119.7°	109.5°
O1B	PB	O3A	111.2°	109.5°
O2B	PB	O3A	101.0°	109.5°
PB	O2B	HOB2	112.2°	106.8°
PB	O3A	PA	122.9°	106.8°
O3A	PA	O1A	108.0°	109.5°
O3A	PA	O2A	111.9°	109.5°
O3A	PA	O5'	93.9°	109.5°
O1A	PA	O2A	121.1°	109.5°
O1A	PA	O5'	108.6°	109.4°
O2A	PA	O5'	109.9°	109.5°
PA	O2A	HOA2	111.9°	106.8°
PA	O5'	C5'	129.5°	106.9°
O5'	C5'	C4'	105.6°	109.6°
O5'	C5'	H5'2	110.9°	109.4°
O5'	C5'	H5'1	109.5°	109.5°
C4'	C5'	H5'2	108.2°	109.4°
C4'	C5'	H5'1	111.7°	109.5°
C5'	C4'	O4'	105.3°	110.3°
C5'	C4'	C3'	111.1°	110.5°
C5'	C4'	H4'	112.5°	110.2°
H5'2	C5'	H5'1	110.9°	109.5°
O4'	C4'	C3'	104.1°	104.9°
O4'	C4'	H4'	110.7°	110.4°
C4'	O4'	C1'	112.6°	105.2°
C3'	C4'	H4'	112.5°	110.3°
C4'	C3'	O3'	112.5°	110.6°
C4'	C3'	C2'	101.7°	104.1°
C4'	C3'	H3'	108.0°	110.5°
O4'	C1'	C2'	105.4°	104.9°
O4'	C1'	N9	110.9°	110.4°
O4'	C1'	H1'	109.1°	110.3°
O3'	C3'	C2'	119.5°	110.6°
O3'	C3'	H3'	105.4°	110.4°
C3'	O3'	HO3'	113.2°	106.8°
C2'	C3'	H3'	109.4°	110.5°
C3'	C2'	O2'	116.9°	110.5°
C3'	C2'	C1'	104.1°	104.0°
C3'	C2'	H2'	104.6°	110.5°
O2'	C2'	C1'	113.1°	110.8°
O2'	C2'	H2'	109.5°	110.5°
C2'	O2'	HO2'	106.2°	106.8°
C1'	C2'	H2'	107.9°	110.4°
C2'	C1'	N9	115.4°	110.4°
C2'	C1'	H1'	108.9°	110.4°
N9	C1'	H1'	107.0°	110.3°
C1'	N9	C8	133.0°	126.3°
C1'	N9	C4	123.3°	126.3°
C8	N9	C4	102.6°	107.4°
N9	C8	N7	118.0°	109.8°
N9	C8	H8	122.0°	125.0°
N9	C4	C5	108.3°	106.2°
N9	C4	N3	122.5°	134.1°
N7	C8	H8	119.4°	125.2°
C8	N7	C5	101.4°	109.3°
N7	C5	C6	129.6°	134.1°
N7	C5	C4	109.7°	107.3°
C6	C5	C4	120.7°	118.6°
C5	C6	O6	130.0°	120.8°
C5	C6	N1	110.0°	118.3°
C5	C4	N3	129.2°	119.7°
O6	C6	N1	120.0°	120.8°
C6	N1	C2	123.1°	120.4°
C6	N1	HN1	119.8°	119.8°
C2	N1	HN1	117.1°	119.8°
N1	C2	N2	115.4°	119.1°
N1	C2	N3	128.3°	121.8°
N2	C2	N3	116.3°	119.1°
C2	N2	HN21	121.2°	120.0°
C2	N2	HN22	121.6°	120.0°
C2	N3	C4	108.7°	121.2°
HN21	N2	HN22	117.1°	120.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
PB	N3B	HN31	HN32	173.9°	113.8°
N3B	PB	O1B	O2B	137.8°	120.0°
N3B	PB	O1B	O3A	105.0°	120.0°
N3B	PB	O2B	O3A	98.9°	120.0°
N3B	PB	O2B	HOB2	180.0°	60.0°
N3B	PB	O3A	PA	130.8°	180.0°
HN31	N3B	PB	O1B	47.5°	53.7°
HN31	N3B	PB	O2B	93.4°	173.8°
HN31	N3B	PB	O3A	163.0°	66.2°
HN32	N3B	PB	O1B	125.4°	60.0°
HN32	N3B	PB	O2B	93.7°	60.0°
HN32	N3B	PB	O3A	9.9°	180.0°
O1B	PB	O2B	O3A	122.4°	120.0°
O1B	PB	O2B	HOB2	41.3°	180.0°
O1B	PB	O3A	PA	12.5°	60.0°
O2B	PB	O3A	PA	115.6°	60.0°
O3A	PB	O2B	HOB2	81.1°	60.0°
PB	O3A	PA	O1A	63.0°	60.0°
PB	O3A	PA	O2A	72.7°	60.0°
PB	O3A	PA	O5'	174.0°	180.0°
O3A	PA	O1A	O2A	130.9°	120.0°
O3A	PA	O1A	O5'	100.7°	120.0°
O3A	PA	O2A	O5'	102.9°	120.0°
O3A	PA	O2A	HOA2	180.0°	60.0°
O3A	PA	O5'	C5'	154.8°	180.0°
O1A	PA	O2A	O5'	127.9°	120.0°
O1A	PA	O2A	HOA2	50.7°	180.0°
O1A	PA	O5'	C5'	94.7°	60.0°
O2A	PA	O5'	C5'	39.8°	60.0°
O5'	PA	O2A	HOA2	77.1°	60.0°
PA	O5'	C5'	C4'	158.5°	180.0°
PA	O5'	C5'	H5'2	84.5°	60.0°
PA	O5'	C5'	H5'1	38.1°	59.9°
O5'	C5'	C4'	H5'2	118.7°	120.0°
O5'	C5'	C4'	H5'1	119.0°	120.1°
O5'	C5'	H5'2	H5'1	121.9°	120.0°
O5'	C5'	C4'	O4'	170.3°	61.4°
O5'	C5'	C4'	C3'	58.2°	176.9°
O5'	C5'	C4'	H4'	69.0°	60.8°
C4'	C5'	H5'2	H5'1	122.8°	120.0°
C5'	C4'	O4'	C3'	117.0°	119.0°
C5'	C4'	O4'	H4'	121.8°	122.1°
C5'	C4'	C3'	H4'	127.1°	122.2°
C5'	C4'	O4'	C1'	87.0°	159.5°
C5'	C4'	C3'	O3'	152.2°	98.3°
C5'	C4'	C3'	C2'	78.7°	143.0°
C5'	C4'	C3'	H3'	36.4°	24.3°
H5'2	C5'	C4'	O4'	70.9°	58.6°
H5'2	C5'	C4'	C3'	176.9°	57.0°
H5'2	C5'	C4'	H4'	49.7°	179.2°
H5'1	C5'	C4'	O4'	51.4°	178.5°
H5'1	C5'	C4'	C3'	60.8°	63.0°
H5'1	C5'	C4'	H4'	172.0°	59.3°
O4'	C4'	C3'	H4'	120.0°	118.9°
O4'	C4'	C3'	O3'	94.9°	142.8°
O4'	C4'	C3'	C2'	34.2°	24.1°
O4'	C4'	C3'	H3'	149.3°	94.6°
C4'	O4'	C1'	C2'	11.5°	40.4°
C4'	O4'	C1'	N9	114.1°	159.4°
C4'	O4'	C1'	H1'	128.3°	78.4°
C3'	C4'	O4'	C1'	30.0°	40.5°
C4'	C3'	O3'	C2'	119.2°	114.7°
C4'	C3'	O3'	H3'	117.4°	122.6°
C4'	C3'	C2'	H3'	114.1°	118.7°
C4'	C3'	O3'	HO3'	109.5°	180.0°
C4'	C3'	C2'	O2'	153.1°	118.8°
C4'	C3'	C2'	C1'	27.5°	0.1°
C4'	C3'	C2'	H2'	85.6°	118.6°
H4'	C4'	O4'	C1'	151.1°	78.4°
H4'	C4'	C3'	O3'	25.1°	23.9°
H4'	C4'	C3'	C2'	154.2°	94.8°
H4'	C4'	C3'	H3'	90.8°	146.5°
O4'	C1'	C2'	C3'	11.1°	23.8°
O4'	C1'	C2'	O2'	139.0°	142.6°
O4'	C1'	C2'	N9	122.7°	118.9°
O4'	C1'	C2'	H1'	117.0°	118.9°
O4'	C1'	C2'	H2'	99.7°	94.7°
O4'	C1'	N9	H1'	119.0°	122.2°
O4'	C1'	N9	C8	72.8°	27.1°
O4'	C1'	N9	C4	93.4°	153.0°
O3'	C3'	C2'	H3'	121.4°	122.6°
O3'	C3'	C2'	O2'	28.6°	0.1°
O3'	C3'	C2'	C1'	97.0°	118.9°
O3'	C3'	C2'	H2'	149.9°	122.7°
C2'	C3'	O3'	HO3'	9.7°	65.3°
C3'	C2'	O2'	C1'	120.9°	114.7°
C3'	C2'	O2'	H2'	118.7°	122.6°
C3'	C2'	C1'	H2'	110.8°	118.5°
C3'	C2'	O2'	HO2'	158.3°	61.5°
C3'	C2'	C1'	N9	133.8°	142.8°
C3'	C2'	C1'	H1'	105.9°	95.0°
H3'	C3'	O3'	HO3'	133.1°	57.4°
H3'	C3'	C2'	O2'	92.9°	122.5°
H3'	C3'	C2'	C1'	141.6°	118.6°
H3'	C3'	C2'	H2'	28.4°	0.1°
O2'	C2'	C1'	H2'	121.3°	122.8°
O2'	C2'	C1'	N9	98.3°	98.5°
O2'	C2'	C1'	H1'	22.0°	23.7°
C1'	C2'	O2'	HO2'	80.8°	176.2°
C2'	C1'	N9	H1'	121.3°	122.3°
C2'	C1'	N9	C8	46.9°	88.5°
C2'	C1'	N9	C4	146.9°	91.5°
H2'	C2'	O2'	HO2'	39.5°	61.1°
H2'	C2'	C1'	N9	23.0°	24.3°
H2'	C2'	C1'	H1'	143.3°	146.5°
C1'	N9	C8	C4	168.2°	179.9°
C1'	N9	C8	N7	168.1°	180.0°
C1'	N9	C8	H8	20.4°	0.1°
C1'	N9	C4	C5	169.8°	180.0°
C1'	N9	C4	N3	10.3°	0.1°
H1'	C1'	N9	C8	168.2°	149.3°
H1'	C1'	N9	C4	25.6°	30.8°
N9	C8	N7	H8	171.7°	179.9°
N9	C8	N7	C5	0.3°	0.1°
C8	N9	C4	C5	0.1°	0.1°
C8	N9	C4	N3	179.9°	180.0°
C4	N9	C8	N7	0.1°	0.1°
C4	N9	C8	H8	171.4°	180.0°
N9	C4	C5	N7	0.3°	0.0°
N9	C4	C5	C6	179.8°	180.0°
N9	C4	C5	N3	179.8°	179.9°
N9	C4	N3	C2	179.9°	179.9°
C8	N7	C5	C6	179.9°	180.0°
C8	N7	C5	C4	0.3°	0.0°
H8	C8	N7	C5	171.4°	180.0°
N7	C5	C6	C4	179.5°	180.0°
N7	C5	C6	O6	2.7°	0.0°
N7	C5	C6	N1	179.6°	179.7°
N7	C5	C4	N3	179.9°	179.9°
C5	C6	O6	N1	176.6°	179.7°
C5	C6	N1	C2	0.0°	0.6°
C5	C6	N1	HN1	179.8°	180.0°
C6	C5	C4	N3	0.3°	0.0°
C4	C5	C6	O6	176.8°	180.0°
C4	C5	C6	N1	0.1°	0.3°
C5	C4	N3	C2	0.3°	0.0°
O6	C6	N1	C2	177.2°	179.7°
O6	C6	N1	HN1	2.6°	0.3°
C6	N1	C2	HN1	179.8°	179.4°
C6	N1	C2	N2	179.9°	179.7°
C6	N1	C2	N3	0.0°	0.6°
N1	C2	N2	N3	179.9°	179.7°
N1	C2	N2	HN21	119.3°	179.7°
N1	C2	N2	HN22	55.8°	0.5°
N1	C2	N3	C4	0.2°	0.3°
HN1	N1	C2	N2	0.1°	0.2°
HN1	N1	C2	N3	179.9°	180.0°
C2	N2	HN21	HN22	175.3°	179.8°
N2	C2	N3	C4	179.8°	180.0°
N3	C2	N2	HN21	60.7°	0.1°
N3	C2	N2	HN22	124.2°	179.8°

Definition date:	1999-07-08
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1HOO