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GNG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O5'C5'sing1.43Å1.43Å
O5'H5'sing0.97Å0.95Å
C5'C4'sing1.53Å1.52Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.11Å
C4'O4'sing1.45Å1.45Å
C4'C3'sing1.55Å1.53Å
C4'H4'sing1.09Å1.12Å
O4'C1'sing1.44Å1.43Å
C1'N9sing1.46Å1.46Å
C1'C2'sing1.54Å1.52Å
C1'H1'sing1.09Å1.12Å
N9C8sing1.36Å1.37ÅAromatic
N9C4sing1.36Å1.38ÅAromatic
C8N7doub1.30Å1.31ÅAromatic
C8H8sing1.08Å1.10Å
N7C5sing1.35Å1.38ÅAromatic
C5C4doub1.39Å1.39ÅAromatic
C5C6sing1.47Å1.42Å
C4N3sing1.37Å1.35Å
N3C2sing1.36Å1.33Å
N3HN3sing0.97Å1.02Å
C2N1doub1.32Å1.38Å
C2N2sing1.37Å1.34Å
N1C6sing1.34Å1.39Å
C6O6doub1.22Å1.24Å
N2HN21sing0.97Å1.02Å
N2HN22sing0.97Å1.02Å
C2'C3'sing1.55Å1.52Å
C2'H2'1sing1.09Å1.12Å
C2'H2'2sing1.09Å1.11Å
C3'O3'sing1.43Å1.43Å
C3'H3'sing1.09Å1.11Å
O3'H1sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C5'O5'H5'111.0°106.8°
O5'C5'C4'111.0°109.4°
O5'C5'H5'1111.7°109.4°
O5'C5'H5'2111.7°109.5°
C4'C5'H5'1111.6°109.5°
C4'C5'H5'2111.6°109.4°
C5'C4'O4'110.8°110.8°
C5'C4'C3'112.9°110.6°
C5'C4'H4'105.0°110.6°
H5'1C5'H5'298.8°109.6°
O4'C4'C3'105.6°103.6°
O4'C4'H4'112.4°110.5°
C4'O4'C1'111.2°106.9°
C3'C4'H4'110.3°110.5°
C4'C3'C2'104.0°102.1°
C4'C3'O3'112.2°111.0°
C4'C3'H3'111.5°110.9°
O4'C1'N9107.7°109.9°
O4'C1'C2'106.0°107.4°
O4'C1'H1'113.2°109.9°
N9C1'C2'110.3°109.9°
N9C1'H1'109.0°109.8°
C1'N9C8125.8°126.2°
C1'N9C4127.8°126.3°
C2'C1'H1'110.6°109.9°
C1'C2'C3'104.0°104.2°
C1'C2'H2'1114.3°110.5°
C1'C2'H2'2114.3°110.5°
C8N9C4106.4°107.5°
N9C8N7113.3°109.5°
N9C8H8125.6°125.3°
N9C4C5104.8°106.4°
N9C4N3126.6°134.7°
N7C8H8121.1°125.2°
C8N7C5104.4°109.1°
N7C5C4111.1°107.4°
N7C5C6129.8°134.5°
C4C5C6119.1°118.2°
C5C4N3128.5°118.9°
C5C6N1111.7°118.6°
C5C6O6128.2°120.7°
C4N3C2111.7°120.5°
C4N3HN3111.4°119.8°
C2N3HN3111.3°119.7°
N3C2N1124.0°122.5°
N3C2N2120.3°118.7°
N1C2N2115.7°118.8°
C2N1C6124.9°121.4°
C2N2HN21120.4°120.0°
C2N2HN22108.4°120.0°
N1C6O6120.1°120.7°
HN21N2HN22108.3°120.0°
C3'C2'H2'1114.3°110.5°
C3'C2'H2'2114.3°110.4°
C2'C3'O3'109.8°110.9°
C2'C3'H3'113.8°110.9°
H2'1C2'H2'296.2°110.6°
O3'C3'H3'105.7°110.8°
C3'O3'H1112.2°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O5'C5'C4'H5'1125.3°119.9°
O5'C5'C4'H5'2125.3°119.9°
O5'C5'H5'1H5'2117.6°120.0°
O5'C5'C4'O4'60.4°65.8°
O5'C5'C4'C3'178.6°180.0°
O5'C5'C4'H4'61.3°57.2°
H5'O5'C5'C4'180.0°180.0°
H5'O5'C5'H5'154.8°60.1°
H5'O5'C5'H5'254.8°60.0°
C4'C5'H5'1H5'2117.5°120.0°
C5'C4'O4'C3'122.6°118.6°
C5'C4'O4'H4'117.2°123.0°
C5'C4'C3'H4'117.1°122.8°
C5'C4'O4'C1'115.9°158.5°
C5'C4'C3'C2'98.1°155.7°
C5'C4'C3'O3'143.3°86.1°
C5'C4'C3'H3'24.9°37.5°
H5'1C5'C4'O4'64.9°174.3°
H5'1C5'C4'C3'53.3°60.0°
H5'1C5'C4'H4'173.5°62.7°
H5'2C5'C4'O4'174.4°54.2°
H5'2C5'C4'C3'56.2°60.1°
H5'2C5'C4'H4'64.0°177.1°
O4'C4'C3'H4'121.7°118.4°
C4'O4'C1'N9130.6°145.8°
C4'O4'C1'C2'12.6°26.3°
C4'O4'C1'H1'108.8°93.2°
O4'C4'C3'C2'23.2°36.9°
O4'C4'C3'O3'95.5°155.1°
O4'C4'C3'H3'146.1°81.3°
C3'C4'O4'C1'6.7°39.8°
C4'C3'C2'C1'30.3°20.9°
C4'C3'C2'O3'120.3°118.3°
C4'C3'C2'H3'121.4°118.2°
C4'C3'C2'H2'1155.5°139.6°
C4'C3'C2'H2'295.0°97.8°
C4'C3'O3'H3'121.7°123.6°
C4'C3'O3'H1180.0°174.2°
H4'C4'O4'C1'127.0°78.6°
H4'C4'C3'C2'144.8°81.5°
H4'C4'C3'O3'26.2°36.7°
H4'C4'C3'H3'92.2°160.3°
O4'C1'N9C2'115.2°118.0°
O4'C1'N9H1'123.1°121.0°
O4'C1'C2'H1'123.0°119.5°
O4'C1'N9C835.3°28.2°
O4'C1'N9C4147.3°151.7°
O4'C1'C2'C3'26.7°2.0°
O4'C1'C2'H2'1152.0°116.7°
O4'C1'C2'H2'298.6°120.6°
N9C1'C2'H1'120.7°120.9°
C1'N9C8C4177.9°179.9°
C1'N9C8N7176.2°179.9°
C1'N9C8H83.7°0.1°
C1'N9C4C5176.1°179.9°
C1'N9C4N32.7°0.3°
N9C1'C2'C3'143.1°121.5°
N9C1'C2'H2'191.7°2.8°
N9C1'C2'H2'217.8°119.9°
C2'C1'N9C879.9°89.8°
C2'C1'N9C497.5°90.3°
C1'C2'C3'H2'1125.2°118.7°
C1'C2'C3'H2'2125.3°118.7°
C1'C2'H2'1H2'2120.2°122.7°
C1'C2'C3'O3'90.0°139.2°
C1'C2'C3'H3'151.7°97.3°
H1'C1'N9C8158.4°149.2°
H1'C1'N9C424.2°30.7°
H1'C1'C2'C3'96.3°117.6°
H1'C1'C2'H2'129.0°123.8°
H1'C1'C2'H2'2138.4°1.0°
N9C8N7H8180.0°180.0°
N9C8N7C50.7°0.0°
C8N9C4C51.8°0.0°
C8N9C4N3179.5°179.7°
C4N9C8N71.6°0.0°
C4N9C8H8178.4°180.0°
N9C4C5N71.4°0.0°
N9C4C5N3178.7°179.7°
N9C4C5C6178.1°179.9°
N9C4N3C2178.3°179.8°
N9C4N3HN356.4°0.0°
C8N7C5C40.5°0.0°
C8N7C5C6179.0°179.9°
H8C8N7C5179.3°179.9°
N7C5C4C6179.5°179.9°
N7C5C4N3179.9°179.7°
N7C5C6N1179.6°179.9°
N7C5C6O61.4°0.1°
C5C4N3C20.1°0.6°
C5C4N3HN3125.1°179.6°
C4C5C6N11.0°0.1°
C4C5C6O6178.0°180.0°
C6C5C4N30.6°0.4°
C5C6N1C21.0°0.0°
C5C6N1O6179.1°179.9°
C4N3C2HN3125.3°179.8°
C4N3C2N10.1°0.5°
C4N3C2N2179.6°179.7°
N3C2N1N2179.7°179.8°
N3C2N1C60.6°0.2°
N3C2N2HN21180.0°179.8°
N3C2N2HN2254.7°0.6°
HN3N3C2N1125.2°179.7°
HN3N3C2N255.1°0.1°
C2N1C6O6178.1°179.9°
N1C2N2HN210.3°0.0°
N1C2N2HN22125.6°179.6°
N2C2N1C6179.1°180.0°
C2N2HN21HN22125.3°179.6°
C3'C2'H2'1H2'2120.2°122.5°
C2'C3'O3'H3'123.1°123.6°
C2'C3'O3'H164.8°61.5°
H2'1C2'C3'O3'35.2°102.1°
H2'1C2'C3'H3'83.0°21.4°
H2'2C2'C3'O3'144.7°20.5°
H2'2C2'C3'H3'26.4°144.0°
H3'C3'O3'H158.3°62.1°

225158

PDB entries from 2024-09-18

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