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GN5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAACABsing1.53Å1.55Å
CABCACsing1.53Å1.54Å
CABCADsing1.53Å1.54Å
CABCAEsing1.51Å1.45Å
CAECAJsing1.38Å1.41ÅAromatic
CAECAFdoub1.38Å1.40ÅAromatic
CAJCAIdoub1.38Å1.39ÅAromatic
CAICAHsing1.38Å1.41ÅAromatic
CAFCAGsing1.38Å1.40ÅAromatic
CAGCAHdoub1.38Å1.39ÅAromatic
CAHCAKsing1.51Å1.43Å
CAKNALsing1.46Å1.50Å
CAKNAQsing1.47Å1.51Å
NALCAMsing1.35Å1.41Å
CAMOANdoub1.22Å1.23Å
CAMCAOsing1.47Å1.40Å
CAOCAUdoub1.39Å1.39ÅAromatic
CAOCAPsing1.41Å1.41ÅAromatic
CAUCATsing1.39Å1.39ÅAromatic
CATCASdoub1.38Å1.39ÅAromatic
CASNARsing1.32Å1.42ÅAromatic
NARCAPdoub1.32Å1.35ÅAromatic
CAPNAQsing1.39Å1.40Å
CAAHAA1sing1.09Å1.10Å
CAAHAA2sing1.09Å1.10Å
CAAHAA3sing1.09Å1.10Å
CACHAC1sing1.09Å1.10Å
CACHAC2sing1.09Å1.10Å
CACHAC3sing1.09Å1.10Å
CADHAD1sing1.09Å1.10Å
CADHAD2sing1.09Å1.10Å
CADHAD3sing1.09Å1.10Å
CAJHAJsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAIHAIsing1.08Å1.08Å
CAGHAGsing1.08Å1.08Å
CAKHAKsing1.09Å1.10Å
NALHALsing0.97Å1.00Å
NAQHAQsing0.97Å1.00Å
CAUHAUsing1.08Å1.08Å
CATHATsing1.08Å1.08Å
CASHASsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAACABCAC107.8°109.5°
CAACABCAD110.1°109.5°
CAACABCAE111.6°109.5°
CABCAAHAA1109.5°109.5°
CABCAAHAA2109.5°109.5°
CABCAAHAA3109.5°109.5°
CACCABCAD106.2°109.4°
CACCABCAE113.0°109.5°
CABCACHAC1109.5°109.5°
CABCACHAC2109.4°109.5°
CABCACHAC3109.5°109.4°
CADCABCAE108.1°109.5°
CABCADHAD1109.5°109.4°
CABCADHAD2109.5°109.5°
CABCADHAD3109.4°109.4°
CABCAECAJ120.6°120.0°
CABCAECAF123.2°120.0°
CAJCAECAF116.2°120.0°
CAECAJCAI122.7°120.0°
CAECAJHAJ118.7°120.0°
CAECAFCAG121.3°120.0°
CAECAFHAF119.3°120.0°
CAJCAICAH120.5°120.0°
CAICAJHAJ118.7°120.0°
CAJCAIHAI119.8°120.0°
CAICAHCAG117.3°120.0°
CAICAHCAK124.5°120.0°
CAHCAIHAI119.7°120.0°
CAFCAGCAH122.0°120.0°
CAGCAFHAF119.4°120.0°
CAFCAGHAG119.0°120.0°
CAGCAHCAK118.1°120.0°
CAHCAGHAG119.0°120.0°
CAHCAKNAL117.8°109.3°
CAHCAKNAQ115.6°109.3°
CAHCAKHAK105.0°109.3°
NALCAKNAQ108.3°110.4°
CAKNALCAM119.6°121.0°
NALCAKHAK104.3°109.3°
CAKNALHAL120.2°119.5°
CAKNAQCAP115.8°118.6°
NAQCAKHAK104.2°109.2°
CAKNAQHAQ107.9°120.7°
NALCAMOAN119.3°120.4°
NALCAMCAO119.4°119.1°
CAMNALHAL120.2°119.5°
OANCAMCAO121.3°120.5°
CAMCAOCAU120.9°122.0°
CAMCAOCAP120.1°118.7°
CAUCAOCAP119.0°119.3°
CAOCAUCAT120.4°117.9°
CAOCAUHAU119.8°121.0°
CAOCAPNAR121.0°120.4°
CAOCAPNAQ118.9°117.8°
CAUCATCAS120.1°119.6°
CATCAUHAU119.8°121.1°
CAUCATHAT119.9°120.3°
CATCASNAR118.9°121.5°
CASCATHAT119.9°120.2°
CATCASHAS120.5°119.2°
CASNARCAP120.5°121.4°
NARCASHAS120.5°119.3°
NARCAPNAQ120.1°121.9°
CAPNAQHAQ107.9°120.7°
HAA1CAAHAA2109.5°109.4°
HAA1CAAHAA3109.5°109.5°
HAA2CAAHAA3109.5°109.5°
HAC1CACHAC2109.5°109.5°
HAC1CACHAC3109.4°109.5°
HAC2CACHAC3109.5°109.5°
HAD1CADHAD2109.5°109.5°
HAD1CADHAD3109.5°109.4°
HAD2CADHAD3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAACABCACCAD117.9°120.0°
CAACABCACCAE123.7°120.0°
CAACABCADCAE122.1°120.0°
CAACABCAECAJ64.7°60.0°
CAACABCAECAF116.1°120.3°
CABCAAHAA1HAA2120.0°120.0°
CABCAAHAA1HAA3120.0°120.0°
CABCAAHAA2HAA3120.0°120.1°
CAACABCACHAC1180.0°60.0°
CAACABCACHAC260.0°180.0°
CAACABCACHAC360.0°60.0°
CAACABCADHAD1180.0°60.0°
CAACABCADHAD260.0°180.0°
CAACABCADHAD360.0°59.9°
CACCABCADCAE121.6°120.0°
CACCABCAECAJ173.7°60.0°
CACCABCAECAF5.5°119.7°
CACCABCAAHAA1180.0°60.0°
CACCABCAAHAA260.0°180.0°
CACCABCAAHAA360.0°60.0°
CABCACHAC1HAC2120.0°120.0°
CABCACHAC1HAC3120.0°120.0°
CABCACHAC2HAC3120.0°120.0°
CACCABCADHAD163.7°180.0°
CACCABCADHAD2176.3°60.0°
CACCABCADHAD356.4°60.0°
CADCABCAECAJ56.5°180.0°
CADCABCAECAF122.7°0.3°
CADCABCAAHAA164.7°180.0°
CADCABCAAHAA2175.3°60.1°
CADCABCAAHAA355.4°60.0°
CADCABCACHAC162.1°60.0°
CADCABCACHAC257.9°60.0°
CADCABCACHAC3177.9°180.0°
CABCADHAD1HAD2120.0°120.0°
CABCADHAD1HAD3120.0°119.9°
CABCADHAD2HAD3120.0°120.0°
CABCAECAJCAF179.2°179.7°
CABCAECAJCAI179.8°180.0°
CABCAECAFCAG178.9°180.0°
CAECABCAAHAA155.4°60.0°
CAECABCAAHAA264.7°60.0°
CAECABCAAHAA3175.4°180.0°
CAECABCACHAC156.3°180.0°
CAECABCACHAC2176.3°60.0°
CAECABCACHAC363.7°60.0°
CAECABCADHAD157.9°60.1°
CAECABCADHAD262.1°60.0°
CAECABCADHAD3177.9°180.0°
CABCAECAJHAJ0.2°0.0°
CABCAECAFHAF1.2°0.0°
CAECAJCAIHAJ180.0°180.0°
CAECAJCAICAH0.2°0.0°
CAJCAECAFCAG0.4°0.3°
CAJCAECAFHAF179.6°179.7°
CAECAJCAIHAI179.7°179.9°
CAFCAECAJCAI0.5°0.3°
CAECAFCAGHAF180.0°179.9°
CAECAFCAGCAH1.6°0.1°
CAFCAECAJHAJ179.5°179.7°
CAECAFCAGHAG178.4°180.0°
CAJCAICAHHAI180.0°180.0°
CAJCAICAHCAG0.9°0.2°
CAJCAICAHCAK176.9°179.9°
CAICAHCAGCAF1.8°0.2°
CAICAHCAGCAK176.3°179.8°
CAICAHCAKNAL13.4°30.0°
CAICAHCAKNAQ143.7°150.9°
CAHCAICAJHAJ179.8°179.9°
CAICAHCAGHAG178.2°179.8°
CAICAHCAKHAK102.1°89.7°
CAFCAGCAHHAG180.0°180.0°
CAFCAGCAHCAK178.1°180.0°
CAGCAHCAKNAL170.6°150.2°
CAGCAHCAKNAQ40.3°29.3°
CAHCAGCAFHAF178.4°180.0°
CAGCAHCAIHAI179.1°179.8°
CAGCAHCAKHAK73.9°90.2°
CAHCAKNALNAQ133.6°120.3°
CAHCAKNALHAK115.9°119.6°
CAHCAKNAQHAK114.7°119.5°
CAHCAKNALCAM167.1°89.2°
CAHCAKNAQCAP176.9°75.5°
CAKCAHCAIHAI3.1°0.0°
CAKCAHCAGHAG1.9°0.1°
CAHCAKNALHAL12.9°90.8°
CAHCAKNAQHAQ56.0°104.4°
NALCAKNAQHAK110.6°120.2°
CAKNALCAMHAL180.0°180.0°
CAKNALCAMOAN178.4°176.4°
CAKNALCAMCAO2.8°3.6°
NALCAKNAQCAP48.3°44.8°
NALCAKNAQHAQ169.2°135.3°
NAQCAKNALCAM33.5°31.1°
CAKNAQCAPCAO33.1°29.8°
CAKNAQCAPNAR145.5°150.0°
CAKNAQCAPHAQ120.9°179.9°
NAQCAKNALHAL146.5°148.9°
NALCAMOANCAO178.8°180.0°
NALCAMCAOCAU163.0°166.1°
NALCAMCAOCAP16.8°14.0°
CAMNALCAKHAK77.0°151.2°
OANCAMCAOCAU18.2°13.9°
OANCAMCAOCAP162.0°166.0°
OANCAMNALHAL1.6°3.6°
CAMCAOCAUCAP179.8°179.9°
CAMCAOCAUCAT179.7°179.7°
CAMCAOCAPNAR179.7°179.5°
CAMCAOCAPNAQ1.1°0.7°
CAOCAMNALHAL177.2°176.4°
CAMCAOCAUHAU0.3°0.3°
CAOCAUCATHAU180.0°180.0°
CAOCAUCATCAS0.6°0.0°
CAUCAOCAPNAR0.1°0.4°
CAUCAOCAPNAQ178.8°179.4°
CAOCAUCATHAT179.4°179.9°
CAPCAOCAUCAT0.1°0.2°
CAOCAPNARCAS0.5°0.3°
CAOCAPNARNAQ178.7°179.7°
CAOCAPNAQHAQ154.0°150.3°
CAPCAOCAUHAU179.9°179.8°
CAUCATCASHAT180.0°179.9°
CAUCATCASNAR1.0°0.2°
CAUCATCASHAS179.0°179.9°
CATCASNARHAS180.0°180.0°
CATCASNARCAP1.0°0.0°
CASCATCAUHAU179.4°180.0°
CASNARCAPNAQ179.2°179.5°
NARCASCATHAT179.0°179.8°
NARCAPNAQHAQ24.6°30.0°
CAPNARCASHAS179.0°180.0°
CAPNAQCAKHAK62.2°165.0°
HAA1CAAHAA2HAA3120.0°120.0°
HAC1CACHAC2HAC3120.0°120.0°
HAD1CADHAD2HAD3120.0°120.0°
HAJCAJCAIHAI0.3°0.1°
HAFCAFCAGHAG1.6°0.0°
HAKCAKNALHAL103.0°28.8°
HAKCAKNAQHAQ58.7°15.1°
HAUCAUCATHAT0.5°0.1°
HATCATCASHAS1.0°0.2°

248636

PDB entries from 2026-02-04

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