GN1

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O1	sing	1.43Å	1.46Å
C1	O5	sing	1.43Å	1.49Å
C1	C2	sing	1.53Å	1.57Å
C1	H1	sing	1.10Å	1.10Å
OP1	P	sing	1.62Å	1.56Å
OP1	HOP1	sing	0.98Å	0.95Å
P	OP3	doub	1.50Å	1.47Å
P	OP2	sing	1.62Å	1.48Å
P	O1	sing	1.61Å	1.60Å
OP2	HOP2	sing	0.98Å	0.95Å
C2	C3	sing	1.53Å	1.59Å
C2	N2	sing	1.44Å	1.50Å
C2	H2	sing	1.10Å	1.10Å
C3	C4	sing	1.53Å	1.54Å
C3	O3	sing	1.43Å	1.50Å
C3	H3	sing	1.10Å	1.10Å
C4	C5	sing	1.53Å	1.63Å
C4	O4	sing	1.43Å	1.44Å
C4	H4	sing	1.10Å	1.10Å
C5	C6	sing	1.53Å	1.55Å
C5	O5	sing	1.43Å	1.51Å
C5	H5	sing	1.10Å	1.10Å
C6	O6	sing	1.41Å	1.43Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
C8	C7	sing	1.49Å	1.52Å
C8	H81	sing	1.10Å	1.10Å
C8	H82	sing	1.10Å	1.10Å
C8	H83	sing	1.10Å	1.10Å
O3	HO3	sing	0.97Å	0.95Å
O4	HO4	sing	0.97Å	0.95Å
N2	C7	sing	1.38Å	1.33Å
N2	HN2	sing	1.02Å	1.00Å
C7	O7	doub	1.23Å	1.27Å
O6	HO6	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O1	C1	O5	111.1°	112.0°
O1	C1	C2	110.1°	110.5°
O1	C1	H1	108.4°	106.9°
C1	O1	P	122.9°	118.2°
O5	C1	C2	111.0°	109.9°
O5	C1	H1	107.4°	107.4°
C1	O5	C5	115.1°	113.4°
C2	C1	H1	108.6°	110.0°
C1	C2	C3	111.6°	110.8°
C1	C2	N2	108.4°	111.1°
C1	C2	H2	109.8°	109.2°
P	OP1	HOP1	109.5°	118.9°
OP1	P	OP3	106.3°	115.3°
OP1	P	OP2	112.9°	103.3°
OP1	P	O1	110.0°	103.8°
OP3	P	OP2	113.5°	115.0°
OP3	P	O1	102.9°	115.2°
OP2	P	O1	110.7°	102.6°
P	OP2	HOP2	109.5°	119.0°
C3	C2	N2	112.3°	111.3°
C3	C2	H2	105.6°	108.5°
C2	C3	C4	107.9°	110.5°
C2	C3	O3	110.6°	108.7°
C2	C3	H3	110.1°	111.4°
N2	C2	H2	109.0°	105.7°
C2	N2	C7	122.3°	123.2°
C2	N2	HN2	118.9°	118.5°
C4	C3	O3	110.3°	108.7°
C4	C3	H3	110.4°	110.7°
C3	C4	C5	109.2°	111.3°
C3	C4	O4	108.9°	108.0°
C3	C4	H4	110.5°	109.4°
O3	C3	H3	107.7°	106.7°
C3	O3	HO3	109.5°	106.4°
C5	C4	O4	110.8°	110.3°
C5	C4	H4	108.6°	110.3°
C4	C5	C6	113.9°	112.1°
C4	C5	O5	109.6°	110.8°
C4	C5	H5	106.0°	110.4°
O4	C4	H4	108.9°	107.3°
C4	O4	HO4	109.5°	106.5°
C6	C5	O5	108.6°	107.0°
C6	C5	H5	107.2°	106.9°
C5	C6	O6	108.0°	108.6°
C5	C6	H61	110.0°	109.9°
C5	C6	H62	110.3°	109.9°
O5	C5	H5	111.6°	109.5°
O6	C6	H61	110.0°	109.4°
O6	C6	H62	110.3°	109.4°
C6	O6	HO6	109.5°	107.2°
H61	C6	H62	108.3°	109.8°
C7	C8	H81	109.5°	112.4°
C7	C8	H82	109.5°	112.4°
C7	C8	H83	109.4°	115.4°
C8	C7	N2	114.9°	114.0°
C8	C7	O7	121.3°	119.6°
H81	C8	H82	109.5°	105.3°
H81	C8	H83	109.5°	105.2°
H82	C8	H83	109.5°	105.3°
C7	N2	HN2	118.8°	118.3°
N2	C7	O7	123.8°	126.3°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O1	C1	O5	C2	122.9°	123.2°
O1	C1	O5	H1	118.5°	117.1°
O1	C1	C2	H1	118.6°	117.8°
C1	O1	P	OP1	68.9°	53.0°
C1	O1	P	OP3	178.2°	180.0°
C1	O1	P	OP2	56.6°	54.3°
O1	C1	C2	C3	69.2°	67.7°
O1	C1	C2	N2	55.1°	56.7°
O1	C1	C2	H2	174.1°	172.9°
O1	C1	O5	C5	69.4°	61.8°
O5	C1	C2	H1	117.9°	118.1°
O5	C1	O1	P	51.2°	87.4°
O5	C1	C2	C3	54.4°	56.4°
O5	C1	C2	N2	178.6°	179.2°
O5	C1	C2	H2	62.4°	63.0°
C1	O5	C5	C4	54.9°	60.1°
C1	O5	C5	C6	179.9°	177.5°
C1	O5	C5	H5	62.3°	62.0°
C2	C1	O1	P	174.6°	149.7°
C1	C2	C3	N2	122.0°	124.3°
C1	C2	C3	H2	119.3°	119.9°
C1	C2	N2	H2	119.5°	118.3°
C1	C2	C3	C4	59.0°	51.6°
C1	C2	C3	O3	179.7°	170.8°
C1	C2	C3	H3	61.5°	71.9°
C2	C1	O5	C5	53.5°	61.5°
C1	C2	N2	C7	152.1°	88.4°
C1	C2	N2	HN2	27.9°	91.7°
H1	C1	O1	P	66.7°	30.0°
H1	C1	C2	C3	172.3°	174.5°
H1	C1	C2	N2	63.5°	61.1°
H1	C1	C2	H2	55.5°	55.1°
H1	C1	O5	C5	172.1°	178.8°
OP1	P	OP3	OP2	124.8°	120.0°
OP1	P	OP3	O1	115.6°	121.0°
OP1	P	OP2	O1	123.8°	107.7°
OP1	P	OP2	HOP2	130.8°	78.5°
HOP1	OP1	P	OP3	151.0°	48.7°
HOP1	OP1	P	OP2	83.9°	77.5°
HOP1	OP1	P	O1	40.3°	175.7°
OP3	P	OP2	O1	115.1°	125.8°
OP3	P	OP2	HOP2	108.1°	48.0°
O1	P	OP2	HOP2	7.0°	173.8°
C3	C2	N2	H2	116.7°	117.6°
C2	C3	C4	O3	120.9°	119.2°
C2	C3	C4	H3	120.3°	124.0°
C2	C3	O3	H3	120.3°	120.3°
C2	C3	C4	C5	59.7°	50.1°
C2	C3	C4	O4	179.2°	171.3°
C2	C3	C4	H4	59.7°	72.1°
C2	C3	O3	HO3	134.2°	65.6°
C3	C2	N2	C7	84.1°	147.5°
C3	C2	N2	HN2	95.9°	32.4°
N2	C2	C3	C4	179.0°	175.9°
N2	C2	C3	O3	58.4°	64.9°
N2	C2	C3	H3	60.5°	52.4°
C2	N2	C7	C8	179.1°	179.9°
C2	N2	C7	HN2	180.0°	179.9°
C2	N2	C7	O7	0.3°	0.0°
H2	C2	C3	C4	60.3°	68.2°
H2	C2	C3	O3	60.4°	51.0°
H2	C2	C3	H3	179.2°	168.2°
H2	C2	N2	C7	32.6°	30.0°
H2	C2	N2	HN2	147.4°	150.0°
C4	C3	O3	H3	120.5°	119.5°
C3	C4	C5	O4	119.9°	119.9°
C3	C4	C5	H4	120.5°	121.7°
C3	C4	O4	H4	120.5°	117.9°
C3	C4	C5	C6	179.9°	172.8°
C3	C4	C5	O5	58.1°	53.4°
C3	C4	C5	H5	62.5°	68.1°
C4	C3	O3	HO3	106.6°	54.7°
C3	C4	O4	HO4	112.1°	43.0°
O3	C3	C4	C5	179.4°	169.3°
O3	C3	C4	O4	58.3°	69.5°
O3	C3	C4	H4	61.2°	47.0°
H3	C3	C4	C5	60.6°	73.9°
H3	C3	C4	O4	60.5°	47.4°
H3	C3	C4	H4	180.0°	163.9°
H3	C3	O3	HO3	13.9°	174.2°
C5	C4	O4	H4	119.4°	120.3°
C4	C5	C6	O5	122.4°	121.7°
C4	C5	C6	H5	116.9°	121.1°
C4	C5	O5	H5	117.2°	122.0°
C4	C5	C6	O6	178.4°	179.5°
C4	C5	C6	H61	58.4°	60.0°
C4	C5	C6	H62	61.0°	60.9°
C5	C4	O4	HO4	127.8°	164.9°
O4	C4	C5	C6	60.2°	67.3°
O4	C4	C5	O5	178.0°	173.3°
O4	C4	C5	H5	57.4°	51.8°
H4	C4	C5	C6	59.4°	51.1°
H4	C4	C5	O5	62.4°	68.3°
H4	C4	C5	H5	177.0°	170.2°
H4	C4	O4	HO4	8.4°	74.9°
C6	C5	O5	H5	117.9°	115.5°
C5	C6	O6	H61	120.0°	119.9°
C5	C6	O6	H62	120.6°	119.9°
C5	C6	H61	H62	120.6°	121.0°
C5	C6	O6	HO6	106.7°	116.9°
O5	C5	C6	O6	56.0°	57.8°
O5	C5	C6	H61	64.0°	61.7°
O5	C5	C6	H62	176.6°	177.4°
H5	C5	C6	O6	64.7°	59.4°
H5	C5	C6	H61	175.3°	178.9°
H5	C5	C6	H62	55.9°	60.2°
O6	C6	H61	H62	120.6°	120.0°
H61	C6	O6	HO6	13.3°	2.9°
H62	C6	O6	HO6	132.7°	123.2°
C7	C8	H81	H82	120.0°	122.7°
C7	C8	H81	H83	120.0°	126.3°
C7	C8	H82	H83	120.0°	126.4°
C8	C7	N2	O7	179.4°	179.9°
C8	C7	N2	HN2	0.9°	0.1°
H81	C8	H82	H83	120.0°	110.9°
H81	C8	C7	N2	35.0°	120.8°
H81	C8	C7	O7	145.6°	59.3°
H82	C8	C7	N2	85.0°	120.6°
H82	C8	C7	O7	94.4°	59.3°
H83	C8	C7	N2	155.0°	0.1°
H83	C8	C7	O7	25.6°	179.9°
HN2	N2	C7	O7	179.7°	180.0°

Definition date:	2007-01-25
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB