GMV
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| VB | O1B | sing | 1.64Å | 1.69Å | |
| VB | O2B | sing | 1.64Å | 1.73Å | |
| VB | O3B | sing | 1.64Å | 1.87Å | |
| VB | O4B | sing | 2.00Å | 2.18Å | |
| VB | O3A | sing | 2.02Å | 2.01Å | |
| O3A | PA | sing | 1.53Å | 1.57Å | |
| PA | O1A | doub | 1.52Å | 1.49Å | |
| PA | O2A | sing | 1.52Å | 1.52Å | |
| PA | O5' | sing | 1.62Å | 1.59Å | |
| O5' | C5' | sing | 1.45Å | 1.46Å | |
| C5' | C4' | sing | 1.51Å | 1.50Å | |
| C4' | O4' | sing | 1.44Å | 1.44Å | |
| C4' | C3' | sing | 1.53Å | 1.55Å | |
| O4' | C1' | sing | 1.43Å | 1.42Å | |
| C3' | O3' | sing | 1.42Å | 1.44Å | |
| C3' | C2' | sing | 1.54Å | 1.51Å | |
| C2' | O2' | sing | 1.42Å | 1.44Å | |
| C2' | C1' | sing | 1.54Å | 1.52Å | |
| C1' | N9 | sing | 1.47Å | 1.46Å | |
| N9 | C8 | sing | 1.37Å | 1.37Å | Aromatic |
| N9 | C4 | sing | 1.39Å | 1.36Å | Aromatic |
| C8 | N7 | doub | 1.31Å | 1.37Å | Aromatic |
| N7 | C5 | sing | 1.39Å | 1.38Å | Aromatic |
| C5 | C6 | sing | 1.42Å | 1.51Å | |
| C5 | C4 | doub | 1.38Å | 1.48Å | Aromatic |
| C6 | O6 | doub | 1.24Å | 1.26Å | |
| C6 | N1 | sing | 1.39Å | 1.38Å | |
| N1 | C2 | sing | 1.38Å | 1.37Å | |
| C2 | N2 | sing | 1.35Å | 1.32Å | |
| C2 | N3 | doub | 1.33Å | 1.40Å | |
| C4 | N3 | sing | 1.36Å | 1.37Å | |
| O1B | H1B | sing | 0.87Å | 0.95Å | |
| O2B | H2B | sing | 0.86Å | 0.95Å | |
| O3B | H3B | sing | 0.87Å | 0.95Å | |
| O4B | H4B | sing | 0.87Å | 0.95Å | |
| O2A | H2A | sing | 11.53Å | 0.95Å | |
| C5' | H5'1 | sing | 0.99Å | 1.10Å | |
| C5' | H5'2 | sing | 0.99Å | 1.10Å | |
| C4' | H4' | sing | 0.99Å | 1.10Å | |
| C3' | H3' | sing | 0.99Å | 1.10Å | |
| C1' | H1' | sing | 1.02Å | 1.10Å | |
| O3' | HA | sing | 0.84Å | 0.95Å | |
| C2' | H2' | sing | 0.99Å | 1.10Å | |
| O2' | HB | sing | 0.84Å | 0.95Å | |
| C8 | H8 | sing | 0.94Å | 1.08Å | |
| N1 | H1 | sing | 0.89Å | 1.00Å | |
| N2 | H21N | sing | 0.88Å | 1.00Å | |
| N2 | H22N | sing | 0.88Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1B | VB | O2B | 114.8° | 130.6° |
| O1B | VB | O3B | 120.4° | 116.3° |
| O1B | VB | O4B | 89.2° | 88.8° |
| O1B | VB | O3A | 97.2° | 97.0° |
| VB | O1B | H1B | 109.5° | 109.3° |
| O2B | VB | O3B | 124.2° | 112.5° |
| O2B | VB | O4B | 88.9° | 82.1° |
| O2B | VB | O3A | 91.2° | 89.5° |
| VB | O2B | H2B | 109.5° | 110.0° |
| O3B | VB | O4B | 84.0° | 91.5° |
| O3B | VB | O3A | 90.1° | 91.3° |
| VB | O3B | H3B | 109.5° | 109.4° |
| O4B | VB | O3A | 172.9° | 171.6° |
| VB | O4B | H4B | 109.5° | 109.6° |
| VB | O3A | PA | 135.5° | 122.4° |
| O3A | PA | O1A | 110.1° | 112.0° |
| O3A | PA | O2A | 111.0° | 114.3° |
| O3A | PA | O5' | 104.1° | 105.7° |
| O1A | PA | O2A | 112.9° | 112.1° |
| O1A | PA | O5' | 109.7° | 105.2° |
| O2A | PA | O5' | 108.6° | 106.8° |
| PA | O2A | H2A | 109.5° | 24.1° |
| PA | O5' | C5' | 124.5° | 122.4° |
| O5' | C5' | C4' | 105.5° | 110.6° |
| O5' | C5' | H5'1 | 110.5° | 109.4° |
| O5' | C5' | H5'2 | 110.5° | 109.6° |
| C5' | C4' | O4' | 107.1° | 110.4° |
| C5' | C4' | C3' | 111.9° | 116.2° |
| C4' | C5' | H5'1 | 110.4° | 109.1° |
| C4' | C5' | H5'2 | 110.5° | 110.1° |
| C5' | C4' | H4' | 110.4° | 107.7° |
| O4' | C4' | C3' | 106.3° | 103.7° |
| C4' | O4' | C1' | 110.1° | 109.8° |
| O4' | C4' | H4' | 111.3° | 109.2° |
| C4' | C3' | O3' | 110.7° | 109.3° |
| C4' | C3' | C2' | 103.9° | 103.0° |
| C3' | C4' | H4' | 109.8° | 109.5° |
| C4' | C3' | H3' | 110.1° | 111.1° |
| O4' | C1' | C2' | 106.2° | 107.7° |
| O4' | C1' | N9 | 109.7° | 109.3° |
| O4' | C1' | H1' | 112.1° | 108.3° |
| O3' | C3' | C2' | 109.5° | 113.9° |
| O3' | C3' | H3' | 111.7° | 109.8° |
| C3' | O3' | HA | 109.5° | 110.6° |
| C3' | C2' | O2' | 114.0° | 112.4° |
| C3' | C2' | C1' | 102.9° | 103.2° |
| C2' | C3' | H3' | 110.7° | 109.6° |
| C3' | C2' | H2' | 108.2° | 109.9° |
| O2' | C2' | C1' | 114.1° | 111.2° |
| O2' | C2' | H2' | 109.1° | 110.3° |
| C2' | O2' | HB | 109.5° | 110.7° |
| C2' | C1' | N9 | 106.4° | 113.8° |
| C2' | C1' | H1' | 110.6° | 108.9° |
| C1' | C2' | H2' | 108.1° | 109.7° |
| C1' | N9 | C8 | 129.1° | 129.0° |
| C1' | N9 | C4 | 120.5° | 125.5° |
| N9 | C1' | H1' | 111.5° | 108.8° |
| C8 | N9 | C4 | 110.3° | 105.5° |
| N9 | C8 | N7 | 108.9° | 113.9° |
| N9 | C8 | H8 | 125.5° | 123.0° |
| N9 | C4 | C5 | 105.5° | 105.8° |
| N9 | C4 | N3 | 135.1° | 126.0° |
| C8 | N7 | C5 | 109.2° | 104.0° |
| N7 | C8 | H8 | 125.6° | 123.1° |
| N7 | C5 | C6 | 137.7° | 129.8° |
| N7 | C5 | C4 | 106.0° | 110.9° |
| C6 | C5 | C4 | 116.4° | 119.4° |
| C5 | C6 | O6 | 118.7° | 128.3° |
| C5 | C6 | N1 | 120.4° | 111.5° |
| C5 | C4 | N3 | 119.4° | 128.2° |
| O6 | C6 | N1 | 120.9° | 120.2° |
| C6 | N1 | C2 | 119.4° | 125.4° |
| C6 | N1 | H1 | 120.3° | 116.4° |
| N1 | C2 | N2 | 119.4° | 117.2° |
| N1 | C2 | N3 | 123.8° | 123.3° |
| C2 | N1 | H1 | 120.3° | 118.2° |
| N2 | C2 | N3 | 116.7° | 119.5° |
| C2 | N2 | H21N | 120.0° | 119.5° |
| C2 | N2 | H22N | 120.0° | 121.2° |
| C2 | N3 | C4 | 120.7° | 112.3° |
| H5'1 | C5' | H5'2 | 109.5° | 108.0° |
| H21N | N2 | H22N | 120.0° | 119.3° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1B | VB | O2B | O3B | 170.6° | 170.0° |
| O1B | VB | O2B | O4B | 88.6° | 81.6° |
| O1B | VB | O2B | O3A | 98.5° | 98.8° |
| O1B | VB | O3B | O4B | 85.5° | 89.4° |
| O1B | VB | O3B | O3A | 98.4° | 98.5° |
| O1B | VB | O4B | O3A | 154.5° | 134.2° |
| O1B | VB | O3A | PA | 147.1° | 48.7° |
| O1B | VB | O2B | H2B | 180.0° | 14.4° |
| O1B | VB | O3B | H3B | 180.0° | 20.1° |
| O1B | VB | O4B | H4B | 180.0° | 55.7° |
| O2B | VB | O3B | O4B | 84.6° | 82.1° |
| O2B | VB | O3B | O3A | 91.5° | 90.0° |
| O2B | VB | O4B | O3A | 90.7° | 3.0° |
| O2B | VB | O3A | PA | 97.8° | 82.2° |
| O2B | VB | O1B | H1B | 180.0° | 14.0° |
| O2B | VB | O3B | H3B | 9.8° | 151.4° |
| O2B | VB | O4B | H4B | 65.2° | 75.6° |
| O3B | VB | O4B | O3A | 33.8° | 109.5° |
| O3B | VB | O3A | PA | 26.4° | 165.4° |
| O3B | VB | O1B | H1B | 9.0° | 155.7° |
| O3B | VB | O2B | H2B | 9.4° | 155.6° |
| O3B | VB | O4B | H4B | 59.3° | 171.9° |
| O4B | VB | O3A | PA | 7.3° | 85.1° |
| O4B | VB | O1B | H1B | 91.6° | 64.5° |
| O4B | VB | O2B | H2B | 91.4° | 67.2° |
| O4B | VB | O3B | H3B | 94.5° | 69.4° |
| VB | O3A | PA | O1A | 135.5° | 126.8° |
| VB | O3A | PA | O2A | 9.7° | 2.0° |
| VB | O3A | PA | O5' | 107.0° | 119.1° |
| O3A | VB | O1B | H1B | 85.4° | 109.4° |
| O3A | VB | O2B | H2B | 81.5° | 113.3° |
| O3A | VB | O3B | H3B | 81.6° | 118.5° |
| O3A | VB | O4B | H4B | 25.5° | 78.5° |
| O3A | PA | O1A | O2A | 124.7° | 130.0° |
| O3A | PA | O1A | O5' | 114.1° | 114.3° |
| O3A | PA | O2A | O5' | 113.9° | 116.5° |
| O3A | PA | O5' | C5' | 176.7° | 71.7° |
| O3A | PA | O2A | H2A | 124.2° | 73.3° |
| O1A | PA | O2A | O5' | 121.8° | 114.7° |
| O1A | PA | O5' | C5' | 65.5° | 169.6° |
| O1A | PA | O2A | H2A | 0.0° | 157.9° |
| O2A | PA | O5' | C5' | 58.3° | 50.4° |
| PA | O5' | C5' | C4' | 163.4° | 131.3° |
| O5' | PA | O2A | H2A | 121.9° | 43.2° |
| PA | O5' | C5' | H5'1 | 77.2° | 108.4° |
| PA | O5' | C5' | H5'2 | 44.0° | 9.7° |
| O5' | C5' | C4' | H5'1 | 119.4° | 120.4° |
| O5' | C5' | C4' | H5'2 | 119.4° | 121.3° |
| O5' | C5' | C4' | O4' | 174.8° | 29.8° |
| O5' | C5' | C4' | C3' | 58.8° | 147.4° |
| O5' | C5' | H5'1 | H5'2 | 121.9° | 119.2° |
| O5' | C5' | C4' | H4' | 63.8° | 89.4° |
| C5' | C4' | O4' | C3' | 119.7° | 125.1° |
| C5' | C4' | O4' | H4' | 120.8° | 118.3° |
| C5' | C4' | C3' | H4' | 122.9° | 122.2° |
| C5' | C4' | O4' | C1' | 123.7° | 155.3° |
| C5' | C4' | C3' | O3' | 142.5° | 81.5° |
| C5' | C4' | C3' | C2' | 100.0° | 157.1° |
| C4' | C5' | H5'1 | H5'2 | 121.8° | 119.6° |
| C5' | C4' | C3' | H3' | 18.5° | 39.8° |
| O4' | C4' | C3' | H4' | 120.5° | 116.4° |
| O4' | C4' | C3' | O3' | 100.9° | 157.2° |
| O4' | C4' | C3' | C2' | 16.5° | 35.7° |
| C4' | O4' | C1' | C2' | 23.0° | 12.1° |
| C4' | O4' | C1' | N9 | 137.6° | 136.1° |
| O4' | C4' | C5' | H5'1 | 65.8° | 150.2° |
| O4' | C4' | C5' | H5'2 | 55.4° | 91.5° |
| O4' | C4' | C3' | H3' | 135.1° | 81.5° |
| C4' | O4' | C1' | H1' | 97.9° | 105.5° |
| C3' | C4' | O4' | C1' | 4.0° | 30.2° |
| C4' | C3' | O3' | C2' | 114.0° | 114.5° |
| C4' | C3' | O3' | H3' | 123.1° | 122.1° |
| C4' | C3' | C2' | H3' | 118.2° | 118.3° |
| C4' | C3' | C2' | O2' | 153.3° | 91.7° |
| C4' | C3' | C2' | C1' | 29.2° | 28.1° |
| C3' | C4' | C5' | H5'1 | 178.1° | 92.2° |
| C3' | C4' | C5' | H5'2 | 60.6° | 26.1° |
| C4' | C3' | O3' | HA | 180.0° | 171.8° |
| C4' | C3' | C2' | H2' | 85.1° | 145.1° |
| O4' | C1' | C2' | C3' | 32.6° | 11.0° |
| O4' | C1' | C2' | O2' | 156.7° | 109.7° |
| O4' | C1' | C2' | N9 | 116.8° | 121.3° |
| O4' | C1' | C2' | H1' | 121.9° | 117.2° |
| O4' | C1' | N9 | H1' | 124.8° | 118.0° |
| O4' | C1' | N9 | C8 | 50.6° | 17.3° |
| O4' | C1' | N9 | C4 | 130.9° | 162.5° |
| C1' | O4' | C4' | H4' | 115.5° | 86.4° |
| O4' | C1' | C2' | H2' | 81.8° | 128.0° |
| O3' | C3' | C2' | H3' | 123.5° | 123.5° |
| O3' | C3' | C2' | O2' | 34.9° | 26.5° |
| O3' | C3' | C2' | C1' | 89.2° | 146.4° |
| O3' | C3' | C4' | H4' | 19.6° | 40.7° |
| O3' | C3' | C2' | H2' | 156.6° | 96.7° |
| C3' | C2' | O2' | C1' | 117.9° | 115.1° |
| C3' | C2' | O2' | H2' | 121.2° | 123.0° |
| C3' | C2' | C1' | H2' | 114.4° | 117.0° |
| C3' | C2' | C1' | N9 | 149.5° | 110.3° |
| C2' | C3' | C4' | H4' | 137.0° | 80.7° |
| C3' | C2' | C1' | H1' | 89.2° | 128.2° |
| C2' | C3' | O3' | HA | 66.0° | 73.6° |
| C3' | C2' | O2' | HB | 180.0° | 169.0° |
| O2' | C2' | C1' | H2' | 121.5° | 122.2° |
| O2' | C2' | C1' | N9 | 86.5° | 129.0° |
| O2' | C2' | C3' | H3' | 88.6° | 150.0° |
| O2' | C2' | C1' | H1' | 34.8° | 7.5° |
| C2' | C1' | N9 | H1' | 120.7° | 121.6° |
| C2' | C1' | N9 | C8 | 63.9° | 103.1° |
| C2' | C1' | N9 | C4 | 114.6° | 77.1° |
| C1' | C2' | C3' | H3' | 147.3° | 90.2° |
| C1' | C2' | O2' | HB | 62.1° | 75.9° |
| C1' | N9 | C8 | C4 | 178.7° | 179.8° |
| C1' | N9 | C8 | N7 | 178.4° | 179.8° |
| C1' | N9 | C4 | C5 | 178.5° | 179.9° |
| C1' | N9 | C4 | N3 | 1.2° | 0.3° |
| N9 | C1' | C2' | H2' | 35.1° | 6.8° |
| C1' | N9 | C8 | H8 | 1.6° | 0.1° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| N9 | C8 | N7 | C5 | 0.0° | 0.1° |
| C8 | N9 | C4 | C5 | 0.3° | 0.0° |
| C8 | N9 | C4 | N3 | 180.0° | 179.9° |
| C8 | N9 | C1' | H1' | 175.4° | 135.3° |
| C4 | N9 | C8 | N7 | 0.2° | 0.0° |
| N9 | C4 | C5 | N7 | 0.3° | 0.1° |
| N9 | C4 | C5 | C6 | 179.7° | 179.9° |
| N9 | C4 | C5 | N3 | 179.7° | 179.8° |
| N9 | C4 | N3 | C2 | 178.4° | 179.8° |
| C4 | N9 | C1' | H1' | 6.1° | 44.5° |
| C4 | N9 | C8 | H8 | 179.8° | 179.9° |
| C8 | N7 | C5 | C6 | 179.9° | 179.9° |
| C8 | N7 | C5 | C4 | 0.2° | 0.1° |
| N7 | C5 | C6 | C4 | 180.0° | 180.0° |
| N7 | C5 | C6 | O6 | 0.4° | 0.1° |
| N7 | C5 | C6 | N1 | 179.6° | 180.0° |
| N7 | C5 | C4 | N3 | 180.0° | 179.9° |
| C5 | N7 | C8 | H8 | 180.0° | 180.0° |
| C5 | C6 | O6 | N1 | 180.0° | 180.0° |
| C5 | C6 | N1 | C2 | 0.3° | 0.0° |
| C6 | C5 | C4 | N3 | 0.0° | 0.1° |
| C5 | C6 | N1 | H1 | 179.6° | 180.0° |
| C4 | C5 | C6 | O6 | 179.6° | 180.0° |
| C4 | C5 | C6 | N1 | 0.5° | 0.0° |
| C5 | C4 | N3 | C2 | 1.2° | 0.1° |
| O6 | C6 | N1 | C2 | 179.6° | 180.0° |
| O6 | C6 | N1 | H1 | 0.4° | 0.0° |
| C6 | N1 | C2 | H1 | 180.0° | 180.0° |
| C6 | N1 | C2 | N2 | 178.9° | 180.0° |
| C6 | N1 | C2 | N3 | 1.7° | 0.0° |
| N1 | C2 | N2 | N3 | 177.4° | 180.0° |
| N1 | C2 | N3 | C4 | 2.2° | 0.0° |
| N1 | C2 | N2 | H21N | 177.4° | 180.0° |
| N1 | C2 | N2 | H22N | 2.6° | 0.1° |
| N2 | C2 | N3 | C4 | 179.5° | 180.0° |
| N2 | C2 | N1 | H1 | 1.1° | 0.1° |
| C2 | N2 | H21N | H22N | 180.0° | 179.9° |
| N3 | C2 | N1 | H1 | 178.3° | 179.9° |
| N3 | C2 | N2 | H21N | 0.0° | 0.0° |
| N3 | C2 | N2 | H22N | 180.0° | 179.9° |
| H5'1 | C5' | C4' | H4' | 55.6° | 31.0° |
| H5'2 | C5' | C4' | H4' | 176.8° | 149.3° |
| H4' | C4' | C3' | H3' | 104.4° | 162.0° |
| H3' | C3' | O3' | HA | 56.9° | 49.8° |
| H3' | C3' | C2' | H2' | 33.1° | 26.8° |
| H1' | C1' | C2' | H2' | 156.4° | 114.8° |
| H2' | C2' | O2' | HB | 58.8° | 46.0° |
