GL6

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
P	O11	doub	1.48Å	1.45Å
P	O13	sing	1.61Å	1.56Å
P	O12	sing	1.61Å	1.58Å
P	N1	sing	1.68Å	1.64Å
O13	C16	sing	1.43Å	1.44Å
O12	C15	sing	1.43Å	1.43Å
O2	C2	sing	1.43Å	1.45Å
O2	HO2	sing	0.97Å	0.95Å
O3	C3	sing	1.43Å	1.45Å
O3	HO3	sing	0.97Å	0.95Å
O4	C4	sing	1.43Å	1.44Å
O4	HO4	sing	0.97Å	0.95Å
O5	C1	sing	1.43Å	1.47Å
O5	C5	sing	1.43Å	1.47Å
O6	C6	sing	1.43Å	1.44Å
O6	HO6	sing	0.97Å	0.95Å
N1	C1	sing	1.47Å	1.45Å
N1	HN1	sing	1.01Å	1.02Å
C1	C2	sing	1.53Å	1.55Å
C1	H1	sing	1.09Å	1.11Å
C15	H151	sing	1.09Å	1.11Å
C15	H152	sing	1.09Å	1.12Å
C15	H153	sing	1.09Å	1.11Å
C16	H161	sing	1.09Å	1.12Å
C16	H162	sing	1.09Å	1.11Å
C16	H163	sing	1.09Å	1.11Å
C2	C3	sing	1.53Å	1.51Å
C2	H2	sing	1.09Å	1.12Å
C3	C4	sing	1.53Å	1.52Å
C3	H3	sing	1.09Å	1.12Å
C4	C5	sing	1.53Å	1.55Å
C4	H4	sing	1.09Å	1.11Å
C5	C6	sing	1.53Å	1.51Å
C5	H5	sing	1.09Å	1.11Å
C6	H61	sing	1.09Å	1.12Å
C6	H62	sing	1.09Å	1.11Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O11	P	O13	115.6°	109.4°
O11	P	O12	111.7°	109.5°
O11	P	N1	111.7°	109.5°
O13	P	O12	103.2°	109.4°
O13	P	N1	104.2°	109.5°
P	O13	C16	119.3°	106.8°
O12	P	N1	110.0°	109.5°
P	O12	C15	124.6°	106.8°
P	N1	C1	121.6°	106.7°
P	N1	HN1	107.9°	106.7°
O13	C16	H161	108.7°	109.5°
O13	C16	H162	119.3°	109.5°
O13	C16	H163	108.7°	109.5°
O12	C15	H151	106.8°	109.5°
O12	C15	H152	124.6°	109.4°
O12	C15	H153	106.9°	109.4°
C2	O2	HO2	105.7°	106.8°
O2	C2	C1	105.7°	109.5°
O2	C2	C3	111.7°	109.5°
O2	C2	H2	111.0°	109.5°
C3	O3	HO3	110.4°	106.8°
O3	C3	C2	110.5°	109.7°
O3	C3	C4	107.6°	109.6°
O3	C3	H3	110.0°	109.7°
C4	O4	HO4	108.5°	106.8°
O4	C4	C3	108.5°	109.7°
O4	C4	C5	110.5°	109.6°
O4	C4	H4	109.7°	109.5°
C1	O5	C5	112.8°	107.6°
O5	C1	N1	110.7°	109.4°
O5	C1	C2	109.4°	109.8°
O5	C1	H1	108.6°	109.4°
O5	C5	C4	107.5°	109.8°
O5	C5	C6	108.0°	109.4°
O5	C5	H5	113.4°	109.4°
C6	O6	HO6	109.1°	106.8°
O6	C6	C5	109.1°	109.5°
O6	C6	H61	112.4°	109.5°
O6	C6	H62	112.4°	109.5°
C1	N1	HN1	107.9°	106.7°
N1	C1	C2	109.0°	109.4°
N1	C1	H1	109.0°	109.4°
C2	C1	H1	110.3°	109.4°
C1	C2	C3	110.6°	109.0°
C1	C2	H2	112.0°	109.6°
H151	C15	H152	106.9°	109.5°
H151	C15	H153	102.8°	109.5°
H152	C15	H153	106.8°	109.5°
H161	C16	H162	108.6°	109.4°
H161	C16	H163	101.4°	109.5°
H162	C16	H163	108.7°	109.5°
C3	C2	H2	106.0°	109.6°
C2	C3	C4	109.3°	108.6°
C2	C3	H3	108.3°	109.7°
C4	C3	H3	111.2°	109.6°
C3	C4	C5	110.2°	109.0°
C3	C4	H4	110.0°	109.5°
C5	C4	H4	108.0°	109.5°
C4	C5	C6	114.0°	109.4°
C4	C5	H5	107.3°	109.4°
C6	C5	H5	106.9°	109.4°
C5	C6	H61	112.4°	109.5°
C5	C6	H62	112.4°	109.5°
H61	C6	H62	98.0°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O11	P	O13	O12	122.2°	120.0°
O11	P	O13	N1	122.9°	120.1°
O11	P	O12	N1	124.6°	120.1°
O11	P	O13	C16	49.3°	45.0°
O11	P	O12	C15	148.0°	50.0°
O11	P	N1	C1	0.1°	174.8°
O11	P	N1	HN1	125.1°	61.0°
O13	P	O12	N1	110.6°	120.0°
O13	P	O12	C15	23.2°	170.0°
O13	P	N1	C1	125.3°	65.2°
O13	P	N1	HN1	109.5°	179.0°
P	O13	C16	H161	54.8°	59.9°
P	O13	C16	H162	180.0°	60.0°
P	O13	C16	H163	54.7°	180.0°
O12	P	O13	C16	171.5°	165.0°
O12	P	N1	C1	124.8°	54.7°
O12	P	N1	HN1	0.5°	59.0°
P	O12	C15	H151	54.7°	180.0°
P	O12	C15	H152	180.0°	60.0°
P	O12	C15	H153	54.8°	60.0°
N1	P	O13	C16	73.7°	75.0°
N1	P	O12	C15	87.4°	70.1°
P	N1	C1	O5	104.3°	52.2°
P	N1	C1	HN1	125.2°	113.8°
P	N1	C1	C2	135.4°	68.1°
P	N1	C1	H1	15.0°	172.0°
O13	C16	H161	H162	131.3°	120.0°
O13	C16	H161	H163	114.4°	120.1°
O13	C16	H162	H163	125.3°	120.0°
O12	C15	H151	H152	135.4°	120.0°
O12	C15	H151	H153	112.3°	120.0°
O12	C15	H152	H153	125.3°	119.9°
O2	C2	C3	O3	68.6°	66.6°
O2	C2	C1	O5	176.9°	178.8°
O2	C2	C1	N1	62.0°	58.7°
O2	C2	C1	C3	121.0°	119.8°
O2	C2	C1	H2	120.9°	120.2°
O2	C2	C1	H1	57.6°	61.1°
O2	C2	C3	H2	121.0°	120.2°
O2	C2	C3	C4	173.2°	173.7°
O2	C2	C3	H3	51.9°	53.9°
HO2	O2	C2	C1	180.0°	179.5°
HO2	O2	C2	C3	59.7°	60.0°
HO2	O2	C2	H2	58.4°	60.2°
O3	C3	C4	O4	60.5°	66.4°
O3	C3	C2	C1	174.0°	173.6°
O3	C3	C2	C4	118.2°	119.8°
O3	C3	C2	H3	120.5°	120.5°
O3	C3	C2	H2	52.4°	53.6°
O3	C3	C4	H3	120.5°	120.4°
O3	C3	C4	C5	178.4°	173.6°
O3	C3	C4	H4	59.5°	53.8°
HO3	O3	C3	C2	180.0°	60.9°
HO3	O3	C3	C4	60.7°	179.9°
HO3	O3	C3	H3	60.5°	59.6°
O4	C4	C5	O5	180.0°	178.8°
O4	C4	C3	C2	179.5°	173.7°
O4	C4	C3	C5	121.1°	120.0°
O4	C4	C3	H4	120.0°	120.2°
O4	C4	C3	H3	60.0°	53.9°
O4	C4	C5	H4	119.9°	120.1°
O4	C4	C5	C6	60.3°	58.6°
O4	C4	C5	H5	57.7°	61.2°
HO4	O4	C4	C3	180.0°	60.3°
HO4	O4	C4	C5	59.1°	180.0°
HO4	O4	C4	H4	59.8°	59.9°
O5	C1	N1	C2	120.3°	120.3°
O5	C1	N1	H1	119.3°	119.9°
O5	C1	N1	HN1	20.9°	61.6°
O5	C1	C2	H1	119.3°	120.1°
O5	C1	C2	C3	55.9°	61.4°
O5	C1	C2	H2	62.2°	58.6°
C1	O5	C5	C4	61.9°	67.5°
C1	O5	C5	C6	174.7°	172.4°
C1	O5	C5	H5	56.5°	52.5°
O5	C5	C6	O6	70.0°	65.0°
C5	O5	C1	N1	179.8°	172.3°
C5	O5	C1	C2	60.1°	67.6°
C5	O5	C1	H1	60.3°	52.5°
O5	C5	C4	C3	60.1°	61.2°
O5	C5	C4	C6	119.6°	120.1°
O5	C5	C4	H5	122.3°	120.1°
O5	C5	C4	H4	60.0°	58.6°
O5	C5	C6	H5	122.3°	119.9°
O5	C5	C6	H61	55.3°	175.0°
O5	C5	C6	H62	164.8°	55.0°
O6	C6	C5	C4	49.4°	174.7°
O6	C6	C5	H61	125.3°	120.0°
O6	C6	C5	H62	125.3°	120.0°
O6	C6	C5	H5	167.8°	54.9°
O6	C6	H61	H62	118.3°	120.0°
HO6	O6	C6	C5	180.0°	180.0°
HO6	O6	C6	H61	54.7°	60.0°
HO6	O6	C6	H62	54.7°	60.0°
N1	C1	C2	H1	119.6°	119.8°
N1	C1	C2	C3	177.0°	178.5°
N1	C1	C2	H2	58.9°	61.5°
HN1	N1	C1	C2	99.4°	178.1°
HN1	N1	C1	H1	140.2°	58.3°
C1	C2	C3	H2	121.7°	120.0°
C1	C2	C3	C4	55.8°	53.8°
C1	C2	C3	H3	65.4°	65.9°
H1	C1	C2	C3	63.4°	58.7°
H1	C1	C2	H2	178.5°	178.7°
H151	C15	H152	H153	109.5°	120.0°
H161	C16	H162	H163	109.5°	120.0°
C2	C3	C4	H3	119.5°	119.8°
C2	C3	C4	C5	58.4°	53.7°
C2	C3	C4	H4	60.5°	66.1°
H2	C2	C3	C4	65.8°	66.2°
H2	C2	C3	H3	172.9°	174.1°
C3	C4	C5	H4	120.1°	119.8°
C3	C4	C5	C6	179.7°	178.7°
C3	C4	C5	H5	62.2°	58.9°
H3	C3	C4	C5	61.1°	66.0°
H3	C3	C4	H4	180.0°	174.2°
C4	C5	C6	H5	118.3°	119.8°
C4	C5	C6	H61	174.7°	54.7°
C4	C5	C6	H62	75.8°	65.3°
H4	C4	C5	C6	59.6°	61.5°
H4	C4	C5	H5	177.7°	178.7°
C5	C6	H61	H62	118.3°	120.0°
H5	C5	C6	H61	66.9°	65.1°
H5	C5	C6	H62	42.5°	174.9°

Definition date:	2004-09-06
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Derived from:	1XC7