GL1
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.53Å | 1.53Å | |
C1 | O1 | sing | 1.43Å | 1.42Å | |
C1 | O5 | sing | 1.43Å | 1.45Å | |
C1 | H1 | sing | 1.09Å | 1.11Å | |
C2 | C3 | sing | 1.53Å | 1.52Å | |
C2 | O2 | sing | 1.43Å | 1.46Å | |
C2 | H2 | sing | 1.09Å | 1.11Å | |
C3 | C4 | sing | 1.53Å | 1.59Å | |
C3 | O3 | sing | 1.43Å | 1.42Å | |
C3 | H3 | sing | 1.09Å | 1.12Å | |
C4 | C5 | sing | 1.53Å | 1.55Å | |
C4 | O4 | sing | 1.43Å | 1.45Å | |
C4 | H4 | sing | 1.09Å | 1.12Å | |
C5 | C6 | sing | 1.53Å | 1.56Å | |
C5 | O5 | sing | 1.43Å | 1.44Å | |
C5 | H5 | sing | 1.09Å | 1.12Å | |
C6 | O6 | sing | 1.43Å | 1.38Å | |
C6 | H61 | sing | 1.09Å | 1.11Å | |
C6 | H62 | sing | 1.09Å | 1.11Å | |
O1 | P | sing | 1.61Å | 1.64Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
O3 | HO3 | sing | 0.97Å | 0.95Å | |
O4 | HO4 | sing | 0.97Å | 0.95Å | |
O6 | HO6 | sing | 0.97Å | 0.95Å | |
P | O1P | sing | 1.61Å | 1.57Å | |
P | O2P | sing | 1.61Å | 1.55Å | |
P | O3P | doub | 1.48Å | 1.57Å | |
O1P | H1P | sing | 0.97Å | 0.95Å | |
O2P | H2P | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O1 | 111.2° | 109.4° |
C2 | C1 | O5 | 108.6° | 109.8° |
C2 | C1 | H1 | 107.7° | 109.5° |
C1 | C2 | C3 | 110.9° | 109.0° |
C1 | C2 | O2 | 110.0° | 109.5° |
C1 | C2 | H2 | 108.5° | 109.5° |
O1 | C1 | O5 | 105.7° | 109.4° |
O1 | C1 | H1 | 110.6° | 109.4° |
C1 | O1 | P | 122.8° | 106.8° |
O5 | C1 | H1 | 113.1° | 109.4° |
C1 | O5 | C5 | 114.8° | 107.6° |
C3 | C2 | O2 | 110.5° | 109.6° |
C3 | C2 | H2 | 108.0° | 109.6° |
C2 | C3 | C4 | 110.6° | 108.6° |
C2 | C3 | O3 | 110.1° | 109.6° |
C2 | C3 | H3 | 108.7° | 109.7° |
O2 | C2 | H2 | 108.9° | 109.5° |
C2 | O2 | HO2 | 110.0° | 106.8° |
C4 | C3 | O3 | 110.7° | 109.7° |
C4 | C3 | H3 | 108.1° | 109.7° |
C3 | C4 | C5 | 107.5° | 109.0° |
C3 | C4 | O4 | 109.4° | 109.5° |
C3 | C4 | H4 | 112.4° | 109.5° |
O3 | C3 | H3 | 108.5° | 109.6° |
C3 | O3 | HO3 | 110.1° | 106.7° |
C5 | C4 | O4 | 114.0° | 109.7° |
C5 | C4 | H4 | 107.8° | 109.5° |
C4 | C5 | C6 | 110.5° | 109.4° |
C4 | C5 | O5 | 110.1° | 109.8° |
C4 | C5 | H5 | 107.7° | 109.4° |
O4 | C4 | H4 | 105.8° | 109.5° |
C4 | O4 | HO4 | 109.4° | 106.8° |
C6 | C5 | O5 | 107.5° | 109.4° |
C6 | C5 | H5 | 110.3° | 109.4° |
C5 | C6 | O6 | 106.1° | 109.4° |
C5 | C6 | H61 | 113.5° | 109.5° |
C5 | C6 | H62 | 113.4° | 109.4° |
O5 | C5 | H5 | 110.8° | 109.4° |
O6 | C6 | H61 | 113.4° | 109.5° |
O6 | C6 | H62 | 113.4° | 109.5° |
C6 | O6 | HO6 | 106.2° | 106.8° |
H61 | C6 | H62 | 97.1° | 109.5° |
O1 | P | O1P | 110.8° | 109.5° |
O1 | P | O2P | 103.8° | 109.5° |
O1 | P | O3P | 110.9° | 109.5° |
O1P | P | O2P | 111.1° | 109.5° |
O1P | P | O3P | 110.9° | 109.5° |
P | O1P | H1P | 110.8° | 106.8° |
O2P | P | O3P | 109.0° | 109.5° |
P | O2P | H2P | 103.8° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O1 | O5 | 117.7° | 120.3° |
C2 | C1 | O1 | H1 | 119.6° | 119.9° |
C2 | C1 | O5 | H1 | 119.5° | 120.1° |
C1 | C2 | C3 | O2 | 122.3° | 119.9° |
C1 | C2 | C3 | H2 | 118.7° | 119.9° |
C1 | C2 | O2 | H2 | 118.8° | 120.1° |
C1 | C2 | C3 | C4 | 55.8° | 53.8° |
C1 | C2 | C3 | O3 | 178.5° | 173.6° |
C1 | C2 | C3 | H3 | 62.8° | 66.0° |
C2 | C1 | O5 | C5 | 61.1° | 67.6° |
C2 | C1 | O1 | P | 96.1° | 149.7° |
C1 | C2 | O2 | HO2 | 180.0° | 60.0° |
O1 | C1 | O5 | H1 | 121.1° | 119.9° |
O1 | C1 | C2 | C3 | 59.2° | 58.8° |
O1 | C1 | C2 | O2 | 63.3° | 61.2° |
O1 | C1 | C2 | H2 | 177.7° | 178.7° |
O1 | C1 | O5 | C5 | 58.3° | 52.5° |
C1 | O1 | P | O1P | 175.6° | 65.0° |
C1 | O1 | P | O2P | 56.2° | 175.0° |
C1 | O1 | P | O3P | 60.7° | 55.0° |
O5 | C1 | C2 | C3 | 56.7° | 61.3° |
O5 | C1 | C2 | O2 | 179.2° | 178.8° |
O5 | C1 | C2 | H2 | 61.8° | 58.7° |
C1 | O5 | C5 | C4 | 62.3° | 67.6° |
C1 | O5 | C5 | C6 | 177.3° | 172.3° |
C1 | O5 | C5 | H5 | 56.7° | 52.4° |
O5 | C1 | O1 | P | 146.2° | 90.0° |
H1 | C1 | C2 | C3 | 179.5° | 178.6° |
H1 | C1 | C2 | O2 | 58.0° | 58.7° |
H1 | C1 | C2 | H2 | 61.1° | 61.4° |
H1 | C1 | O5 | C5 | 179.4° | 172.3° |
H1 | C1 | O1 | P | 23.5° | 29.8° |
C3 | C2 | O2 | H2 | 118.4° | 120.3° |
C2 | C3 | C4 | O3 | 122.3° | 119.8° |
C2 | C3 | C4 | H3 | 118.9° | 119.8° |
C2 | C3 | O3 | H3 | 118.9° | 120.4° |
C2 | C3 | C4 | C5 | 54.3° | 53.8° |
C2 | C3 | C4 | O4 | 70.0° | 66.2° |
C2 | C3 | C4 | H4 | 172.8° | 173.6° |
C3 | C2 | O2 | HO2 | 57.2° | 179.6° |
C2 | C3 | O3 | HO3 | 180.0° | 60.0° |
O2 | C2 | C3 | C4 | 178.1° | 173.6° |
O2 | C2 | C3 | O3 | 59.2° | 66.5° |
O2 | C2 | C3 | H3 | 59.5° | 53.8° |
H2 | C2 | C3 | C4 | 63.0° | 66.1° |
H2 | C2 | C3 | O3 | 59.7° | 53.7° |
H2 | C2 | C3 | H3 | 178.5° | 174.1° |
H2 | C2 | O2 | HO2 | 61.2° | 60.1° |
C4 | C3 | O3 | H3 | 118.5° | 120.4° |
C3 | C4 | C5 | O4 | 121.5° | 119.9° |
C3 | C4 | C5 | H4 | 121.4° | 119.8° |
C3 | C4 | O4 | H4 | 121.3° | 120.1° |
C3 | C4 | C5 | C6 | 174.3° | 178.6° |
C3 | C4 | C5 | O5 | 55.8° | 61.3° |
C3 | C4 | C5 | H5 | 65.2° | 58.7° |
C4 | C3 | O3 | HO3 | 57.4° | 179.2° |
C3 | C4 | O4 | HO4 | 180.0° | 60.0° |
O3 | C3 | C4 | C5 | 176.6° | 173.6° |
O3 | C3 | C4 | O4 | 52.3° | 53.6° |
O3 | C3 | C4 | H4 | 64.9° | 66.5° |
H3 | C3 | C4 | C5 | 64.7° | 66.0° |
H3 | C3 | C4 | O4 | 171.0° | 173.9° |
H3 | C3 | C4 | H4 | 53.8° | 53.8° |
H3 | C3 | O3 | HO3 | 61.1° | 60.4° |
C5 | C4 | O4 | H4 | 118.2° | 120.2° |
C4 | C5 | C6 | O5 | 120.1° | 120.3° |
C4 | C5 | C6 | H5 | 119.0° | 119.9° |
C4 | C5 | O5 | H5 | 119.0° | 120.0° |
C4 | C5 | C6 | O6 | 58.6° | 174.8° |
C4 | C5 | C6 | H61 | 66.6° | 65.2° |
C4 | C5 | C6 | H62 | 176.1° | 54.8° |
C5 | C4 | O4 | HO4 | 59.6° | 179.6° |
O4 | C4 | C5 | C6 | 52.8° | 61.5° |
O4 | C4 | C5 | O5 | 65.8° | 58.6° |
O4 | C4 | C5 | H5 | 173.3° | 178.6° |
H4 | C4 | C5 | C6 | 64.3° | 58.7° |
H4 | C4 | C5 | O5 | 177.2° | 178.8° |
H4 | C4 | C5 | H5 | 56.3° | 61.1° |
H4 | C4 | O4 | HO4 | 58.7° | 60.1° |
C6 | C5 | O5 | H5 | 120.6° | 119.9° |
C5 | C6 | O6 | H61 | 125.2° | 120.0° |
C5 | C6 | O6 | H62 | 125.2° | 120.0° |
C5 | C6 | H61 | H62 | 119.4° | 120.0° |
C5 | C6 | O6 | HO6 | 180.0° | 180.0° |
O5 | C5 | C6 | O6 | 178.7° | 64.9° |
O5 | C5 | C6 | H61 | 53.5° | 55.1° |
O5 | C5 | C6 | H62 | 56.1° | 175.1° |
H5 | C5 | C6 | O6 | 60.4° | 55.0° |
H5 | C5 | C6 | H61 | 174.4° | 175.0° |
H5 | C5 | C6 | H62 | 64.8° | 65.0° |
O6 | C6 | H61 | H62 | 119.4° | 120.1° |
H61 | C6 | O6 | HO6 | 54.7° | 60.0° |
H62 | C6 | O6 | HO6 | 54.8° | 60.0° |
O1 | P | O1P | O2P | 114.9° | 120.0° |
O1 | P | O1P | O3P | 123.6° | 120.0° |
O1 | P | O2P | O3P | 118.3° | 120.0° |
O1 | P | O1P | H1P | 179.9° | 60.0° |
O1 | P | O2P | H2P | 180.0° | 180.0° |
O1P | P | O2P | O3P | 122.5° | 120.0° |
O1P | P | O2P | H2P | 60.8° | 60.0° |
O2P | P | O1P | H1P | 65.1° | 60.0° |
O3P | P | O1P | H1P | 56.3° | 180.0° |
O3P | P | O2P | H2P | 61.7° | 60.0° |