GK3
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N5 | C5 | trip | 1.14Å | 1.33Å | |
C5 | C18 | sing | 1.43Å | 1.48Å | |
C2 | C18 | doub | 1.40Å | 1.41Å | Aromatic |
C2 | C29 | sing | 1.38Å | 1.40Å | Aromatic |
C18 | C22 | sing | 1.40Å | 1.41Å | Aromatic |
C29 | C19 | doub | 1.38Å | 1.41Å | Aromatic |
C22 | C15 | doub | 1.39Å | 1.40Å | Aromatic |
C19 | C15 | sing | 1.39Å | 1.41Å | Aromatic |
C15 | N3 | sing | 1.40Å | 1.37Å | |
N3 | C3 | sing | 1.35Å | 1.35Å | |
C1 | C23 | sing | 1.51Å | 1.51Å | |
C3 | O1 | doub | 1.22Å | 1.34Å | |
C3 | C25 | sing | 1.48Å | 1.52Å | |
C9 | C25 | doub | 1.40Å | 1.40Å | Aromatic |
C9 | C27 | sing | 1.38Å | 1.39Å | Aromatic |
C25 | C10 | sing | 1.40Å | 1.40Å | Aromatic |
C27 | C13 | doub | 1.40Å | 1.40Å | Aromatic |
C23 | C26 | doub | 1.38Å | 1.39Å | Aromatic |
C23 | C28 | sing | 1.40Å | 1.42Å | Aromatic |
C26 | C20 | sing | 1.38Å | 1.37Å | Aromatic |
C10 | C16 | doub | 1.38Å | 1.40Å | Aromatic |
C13 | C28 | sing | 1.48Å | 1.40Å | Aromatic |
C13 | C16 | sing | 1.39Å | 1.41Å | Aromatic |
C28 | C14 | doub | 1.39Å | 1.39Å | Aromatic |
C20 | C17 | doub | 1.40Å | 1.40Å | Aromatic |
C14 | C17 | sing | 1.39Å | 1.39Å | Aromatic |
C17 | C12 | sing | 1.48Å | 1.49Å | Aromatic |
C12 | O2 | sing | 1.35Å | 1.25Å | Aromatic |
C12 | N7 | doub | 1.31Å | 1.35Å | Aromatic |
O2 | C7 | sing | 1.34Å | 1.24Å | Aromatic |
N7 | N4 | sing | 1.29Å | 1.32Å | Aromatic |
C7 | C21 | sing | 1.51Å | 1.50Å | |
C7 | N4 | doub | 1.30Å | 1.34Å | Aromatic |
C2 | H2 | sing | 1.08Å | 1.08Å | |
C29 | H29 | sing | 1.08Å | 1.08Å | |
C19 | H19 | sing | 1.08Å | 1.08Å | |
C22 | H22 | sing | 1.08Å | 1.08Å | |
N3 | HN3 | sing | 0.97Å | 1.00Å | |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C10 | H10 | sing | 1.08Å | 1.08Å | |
C16 | H16 | sing | 1.08Å | 1.08Å | |
C27 | H27 | sing | 1.08Å | 1.08Å | |
C14 | H14 | sing | 1.08Å | 1.08Å | |
C21 | H21 | sing | 1.09Å | 1.10Å | |
C21 | H21A | sing | 1.09Å | 1.10Å | |
C21 | H21B | sing | 1.09Å | 1.10Å | |
C20 | H20 | sing | 1.08Å | 1.08Å | |
C26 | H26 | sing | 1.08Å | 1.08Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C1 | H1B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
N5 | C5 | C18 | 179.2° | 180.0° |
C5 | C18 | C2 | 120.4° | 120.1° |
C5 | C18 | C22 | 119.0° | 120.1° |
C18 | C2 | C29 | 119.4° | 120.0° |
C2 | C18 | C22 | 120.5° | 119.7° |
C18 | C2 | H2 | 120.3° | 120.0° |
C2 | C29 | C19 | 119.8° | 120.2° |
C29 | C2 | H2 | 120.3° | 120.0° |
C2 | C29 | H29 | 120.1° | 119.9° |
C18 | C22 | C15 | 120.6° | 119.8° |
C18 | C22 | H22 | 119.7° | 120.1° |
C29 | C19 | C15 | 121.5° | 120.2° |
C19 | C29 | H29 | 120.1° | 119.9° |
C29 | C19 | H19 | 119.2° | 119.9° |
C22 | C15 | C19 | 118.1° | 120.0° |
C22 | C15 | N3 | 122.8° | 120.0° |
C15 | C22 | H22 | 119.7° | 120.1° |
C19 | C15 | N3 | 119.1° | 119.9° |
C15 | C19 | H19 | 119.3° | 119.9° |
C15 | N3 | C3 | 128.1° | 120.0° |
C15 | N3 | HN3 | 116.0° | 120.0° |
N3 | C3 | O1 | 123.8° | 120.0° |
N3 | C3 | C25 | 119.2° | 120.0° |
C3 | N3 | HN3 | 116.0° | 120.0° |
C1 | C23 | C26 | 115.3° | 119.9° |
C1 | C23 | C28 | 123.5° | 119.9° |
C23 | C1 | H1 | 109.5° | 109.5° |
C23 | C1 | H1A | 109.4° | 109.5° |
C23 | C1 | H1B | 109.4° | 109.4° |
O1 | C3 | C25 | 116.8° | 120.0° |
C3 | C25 | C9 | 119.2° | 120.0° |
C3 | C25 | C10 | 121.1° | 120.0° |
C25 | C9 | C27 | 120.0° | 120.0° |
C9 | C25 | C10 | 119.7° | 120.0° |
C25 | C9 | H9 | 120.0° | 120.0° |
C9 | C27 | C13 | 120.4° | 120.0° |
C27 | C9 | H9 | 120.0° | 120.0° |
C9 | C27 | H27 | 119.8° | 120.0° |
C25 | C10 | C16 | 120.6° | 120.0° |
C25 | C10 | H10 | 119.7° | 120.0° |
C27 | C13 | C28 | 118.2° | 119.9° |
C27 | C13 | C16 | 119.9° | 120.1° |
C13 | C27 | H27 | 119.8° | 120.0° |
C26 | C23 | C28 | 121.2° | 120.2° |
C23 | C26 | C20 | 118.5° | 120.2° |
C23 | C26 | H26 | 120.7° | 119.9° |
C23 | C28 | C13 | 116.8° | 120.0° |
C23 | C28 | C14 | 119.9° | 119.9° |
C26 | C20 | C17 | 120.8° | 120.2° |
C26 | C20 | H20 | 119.6° | 120.0° |
C20 | C26 | H26 | 120.8° | 119.9° |
C10 | C16 | C13 | 119.4° | 120.1° |
C16 | C10 | H10 | 119.7° | 120.1° |
C10 | C16 | H16 | 120.3° | 120.0° |
C28 | C13 | C16 | 121.8° | 120.0° |
C13 | C28 | C14 | 123.3° | 120.0° |
C13 | C16 | H16 | 120.3° | 120.0° |
C28 | C14 | C17 | 117.7° | 119.7° |
C28 | C14 | H14 | 121.1° | 120.2° |
C20 | C17 | C14 | 121.8° | 119.8° |
C20 | C17 | C12 | 114.5° | 120.1° |
C17 | C20 | H20 | 119.6° | 119.9° |
C14 | C17 | C12 | 123.6° | 120.1° |
C17 | C14 | H14 | 121.1° | 120.1° |
C17 | C12 | O2 | 128.9° | 126.4° |
C17 | C12 | N7 | 117.6° | 126.3° |
O2 | C12 | N7 | 113.4° | 107.2° |
C12 | O2 | C7 | 103.3° | 106.4° |
C12 | N7 | N4 | 104.6° | 109.2° |
O2 | C7 | C21 | 120.8° | 126.2° |
O2 | C7 | N4 | 115.7° | 107.6° |
N7 | N4 | C7 | 102.9° | 109.5° |
C21 | C7 | N4 | 123.4° | 126.2° |
C7 | C21 | H21 | 109.5° | 109.4° |
C7 | C21 | H21A | 109.5° | 109.5° |
C7 | C21 | H21B | 109.4° | 109.5° |
H21 | C21 | H21A | 109.4° | 109.5° |
H21 | C21 | H21B | 109.5° | 109.5° |
H21A | C21 | H21B | 109.5° | 109.5° |
H1 | C1 | H1A | 109.5° | 109.5° |
H1 | C1 | H1B | 109.5° | 109.4° |
H1A | C1 | H1B | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
N5 | C5 | C18 | C2 | 176.7° | 44.3° |
N5 | C5 | C18 | C22 | 3.1° | 135.4° |
C5 | C18 | C2 | C22 | 179.8° | 179.8° |
C5 | C18 | C2 | C29 | 179.9° | 180.0° |
C5 | C18 | C22 | C15 | 179.8° | 179.7° |
C5 | C18 | C2 | H2 | 0.1° | 0.0° |
C5 | C18 | C22 | H22 | 0.2° | 0.0° |
C18 | C2 | C29 | H2 | 180.0° | 179.9° |
C18 | C2 | C29 | C19 | 0.3° | 0.0° |
C2 | C18 | C22 | C15 | 0.4° | 0.5° |
C18 | C2 | C29 | H29 | 179.7° | 180.0° |
C2 | C18 | C22 | H22 | 179.6° | 179.7° |
C29 | C2 | C18 | C22 | 0.1° | 0.2° |
C2 | C29 | C19 | H29 | 180.0° | 180.0° |
C2 | C29 | C19 | C15 | 0.8° | 0.0° |
C2 | C29 | C19 | H19 | 179.1° | 179.9° |
C18 | C22 | C15 | H22 | 180.0° | 179.8° |
C18 | C22 | C15 | C19 | 0.8° | 0.5° |
C18 | C22 | C15 | N3 | 179.5° | 179.7° |
C22 | C18 | C2 | H2 | 179.9° | 179.7° |
C29 | C19 | C15 | C22 | 1.1° | 0.3° |
C29 | C19 | C15 | H19 | 180.0° | 179.9° |
C29 | C19 | C15 | N3 | 179.8° | 179.9° |
C19 | C29 | C2 | H2 | 179.7° | 180.0° |
C22 | C15 | C19 | N3 | 178.7° | 179.8° |
C22 | C15 | N3 | C3 | 36.0° | 33.4° |
C22 | C15 | C19 | H19 | 178.9° | 179.8° |
C22 | C15 | N3 | HN3 | 143.9° | 146.6° |
C19 | C15 | N3 | C3 | 145.3° | 146.8° |
C15 | C19 | C29 | H29 | 179.2° | 180.0° |
C19 | C15 | C22 | H22 | 179.1° | 179.7° |
C19 | C15 | N3 | HN3 | 34.7° | 33.2° |
C15 | N3 | C3 | HN3 | 180.0° | 179.9° |
C15 | N3 | C3 | O1 | 2.3° | 5.3° |
C15 | N3 | C3 | C25 | 177.9° | 174.7° |
N3 | C15 | C19 | H19 | 0.2° | 0.0° |
N3 | C15 | C22 | H22 | 0.5° | 0.1° |
N3 | C3 | O1 | C25 | 175.7° | 180.0° |
N3 | C3 | C25 | C9 | 9.9° | 0.3° |
N3 | C3 | C25 | C10 | 172.2° | 179.9° |
C1 | C23 | C26 | C28 | 179.3° | 179.6° |
C1 | C23 | C26 | C20 | 179.9° | 180.0° |
C1 | C23 | C28 | C13 | 1.3° | 0.3° |
C1 | C23 | C28 | C14 | 179.5° | 179.9° |
C1 | C23 | C26 | H26 | 0.1° | 0.2° |
C23 | C1 | H1 | H1A | 120.0° | 120.1° |
C23 | C1 | H1 | H1B | 120.0° | 119.9° |
C23 | C1 | H1A | H1B | 120.0° | 120.0° |
O1 | C3 | C25 | C9 | 166.0° | 179.7° |
O1 | C3 | C25 | C10 | 11.9° | 0.0° |
O1 | C3 | N3 | HN3 | 177.7° | 174.7° |
C3 | C25 | C9 | C10 | 178.0° | 179.8° |
C3 | C25 | C9 | C27 | 178.7° | 180.0° |
C3 | C25 | C10 | C16 | 178.7° | 180.0° |
C25 | C3 | N3 | HN3 | 2.1° | 5.2° |
C3 | C25 | C9 | H9 | 1.3° | 0.0° |
C3 | C25 | C10 | H10 | 1.3° | 0.1° |
C25 | C9 | C27 | H9 | 180.0° | 180.0° |
C25 | C9 | C27 | C13 | 0.4° | 0.0° |
C9 | C25 | C10 | C16 | 0.8° | 0.2° |
C9 | C25 | C10 | H10 | 179.2° | 179.7° |
C25 | C9 | C27 | H27 | 179.6° | 180.0° |
C27 | C9 | C25 | C10 | 0.8° | 0.2° |
C9 | C27 | C13 | H27 | 180.0° | 180.0° |
C9 | C27 | C13 | C28 | 176.6° | 180.0° |
C9 | C27 | C13 | C16 | 1.6° | 0.3° |
C25 | C10 | C16 | H10 | 180.0° | 179.9° |
C25 | C10 | C16 | C13 | 0.5° | 0.0° |
C10 | C25 | C9 | H9 | 179.2° | 179.8° |
C25 | C10 | C16 | H16 | 179.5° | 179.9° |
C27 | C13 | C28 | C23 | 93.2° | 124.5° |
C27 | C13 | C16 | C10 | 1.6° | 0.3° |
C27 | C13 | C28 | C16 | 174.9° | 179.7° |
C27 | C13 | C28 | C14 | 84.9° | 55.8° |
C13 | C27 | C9 | H9 | 179.6° | 180.0° |
C27 | C13 | C16 | H16 | 178.3° | 179.7° |
C23 | C26 | C20 | H26 | 180.0° | 179.8° |
C26 | C23 | C28 | C13 | 179.5° | 179.8° |
C26 | C23 | C28 | C14 | 1.3° | 0.5° |
C23 | C26 | C20 | C17 | 0.1° | 0.3° |
C23 | C26 | C20 | H20 | 179.9° | 179.8° |
C26 | C23 | C1 | H1 | 103.5° | 95.2° |
C26 | C23 | C1 | H1A | 136.5° | 144.7° |
C26 | C23 | C1 | H1B | 16.5° | 24.7° |
C28 | C23 | C26 | C20 | 0.6° | 0.5° |
C23 | C28 | C13 | C14 | 178.1° | 179.7° |
C23 | C28 | C13 | C16 | 81.7° | 55.8° |
C23 | C28 | C14 | C17 | 1.2° | 0.3° |
C23 | C28 | C14 | H14 | 178.8° | 179.7° |
C28 | C23 | C26 | H26 | 179.4° | 179.7° |
C28 | C23 | C1 | H1 | 75.7° | 85.2° |
C28 | C23 | C1 | H1A | 44.2° | 34.9° |
C28 | C23 | C1 | H1B | 164.3° | 154.9° |
C26 | C20 | C17 | H20 | 180.0° | 179.9° |
C26 | C20 | C17 | C14 | 0.1° | 0.0° |
C26 | C20 | C17 | C12 | 176.7° | 180.0° |
C10 | C16 | C13 | C28 | 176.5° | 180.0° |
C10 | C16 | C13 | H16 | 180.0° | 180.0° |
C13 | C28 | C14 | C17 | 179.3° | 180.0° |
C28 | C13 | C16 | H16 | 3.5° | 0.0° |
C28 | C13 | C27 | H27 | 3.3° | 0.0° |
C13 | C28 | C14 | H14 | 0.7° | 0.0° |
C16 | C13 | C28 | C14 | 100.2° | 123.9° |
C13 | C16 | C10 | H10 | 179.6° | 179.9° |
C16 | C13 | C27 | H27 | 178.3° | 179.8° |
C28 | C14 | C17 | C20 | 0.5° | 0.1° |
C28 | C14 | C17 | H14 | 180.0° | 180.0° |
C28 | C14 | C17 | C12 | 175.8° | 180.0° |
C20 | C17 | C14 | C12 | 176.3° | 179.9° |
C20 | C17 | C12 | O2 | 31.8° | 0.1° |
C20 | C17 | C12 | N7 | 147.1° | 179.8° |
C20 | C17 | C14 | H14 | 179.4° | 179.9° |
C17 | C20 | C26 | H26 | 180.0° | 179.9° |
C14 | C17 | C12 | O2 | 151.7° | 180.0° |
C14 | C17 | C12 | N7 | 29.5° | 0.3° |
C14 | C17 | C20 | H20 | 179.9° | 179.9° |
C17 | C12 | O2 | N7 | 178.8° | 179.7° |
C17 | C12 | O2 | C7 | 178.8° | 179.9° |
C17 | C12 | N7 | N4 | 178.7° | 179.9° |
C12 | C17 | C14 | H14 | 4.2° | 0.0° |
C12 | C17 | C20 | H20 | 3.3° | 0.1° |
O2 | C12 | N7 | N4 | 0.3° | 0.4° |
C12 | O2 | C7 | C21 | 179.9° | 180.0° |
C12 | O2 | C7 | N4 | 0.2° | 0.0° |
N7 | C12 | O2 | C7 | 0.1° | 0.2° |
C12 | N7 | N4 | C7 | 0.3° | 0.4° |
O2 | C7 | N4 | N7 | 0.3° | 0.2° |
O2 | C7 | C21 | N4 | 179.7° | 180.0° |
O2 | C7 | C21 | H21 | 36.9° | 90.0° |
O2 | C7 | C21 | H21A | 156.9° | 150.0° |
O2 | C7 | C21 | H21B | 83.1° | 30.0° |
N7 | N4 | C7 | C21 | 180.0° | 179.8° |
C7 | C21 | H21 | H21A | 120.0° | 120.0° |
C7 | C21 | H21 | H21B | 120.0° | 120.0° |
C7 | C21 | H21A | H21B | 120.0° | 120.0° |
N4 | C7 | C21 | H21 | 143.4° | 90.0° |
N4 | C7 | C21 | H21A | 23.4° | 30.0° |
N4 | C7 | C21 | H21B | 96.6° | 150.0° |
H2 | C2 | C29 | H29 | 0.3° | 0.0° |
H29 | C29 | C19 | H19 | 0.8° | 0.1° |
H9 | C9 | C27 | H27 | 0.4° | 0.0° |
H10 | C10 | C16 | H16 | 0.5° | 0.1° |
H21 | C21 | H21A | H21B | 120.0° | 120.0° |
H20 | C20 | C26 | H26 | 0.1° | 0.0° |
H1 | C1 | H1A | H1B | 120.0° | 120.0° |