GHK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O2 | S1 | doub | 1.42Å | 1.48Å | |
C2 | C3 | doub | 1.38Å | 1.39Å | Aromatic |
C2 | C1 | sing | 1.38Å | 1.34Å | Aromatic |
S1 | O1 | doub | 1.42Å | 1.50Å | |
S1 | C1 | sing | 1.76Å | 1.76Å | |
S1 | N1 | sing | 1.66Å | 1.73Å | |
O4 | S2 | doub | 1.42Å | 1.51Å | |
C3 | C4 | sing | 1.40Å | 1.38Å | Aromatic |
C1 | C6 | doub | 1.38Å | 1.43Å | Aromatic |
O3 | S2 | doub | 1.42Å | 1.50Å | |
S2 | C10 | sing | 1.76Å | 1.79Å | |
S2 | N2 | sing | 1.66Å | 1.70Å | |
C11 | C12 | doub | 1.38Å | 1.41Å | Aromatic |
C11 | C10 | sing | 1.38Å | 1.41Å | Aromatic |
C4 | C7 | sing | 1.43Å | 1.39Å | |
C4 | C5 | doub | 1.40Å | 1.37Å | Aromatic |
C12 | C13 | sing | 1.38Å | 1.39Å | Aromatic |
C10 | C15 | doub | 1.38Å | 1.42Å | Aromatic |
C7 | C8 | trip | 1.17Å | 1.16Å | |
C6 | C5 | sing | 1.38Å | 1.39Å | Aromatic |
C8 | C9 | sing | 1.47Å | 1.46Å | |
N2 | C9 | sing | 1.46Å | 1.45Å | |
C13 | C14 | doub | 1.38Å | 1.38Å | Aromatic |
C15 | C14 | sing | 1.38Å | 1.40Å | Aromatic |
C14 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H2 | sing | 1.08Å | 1.08Å | |
C6 | H3 | sing | 1.08Å | 1.08Å | |
C11 | H4 | sing | 1.08Å | 1.08Å | |
C9 | H5 | sing | 1.09Å | 1.10Å | |
C9 | H6 | sing | 1.09Å | 1.10Å | |
C12 | H7 | sing | 1.08Å | 1.08Å | |
C13 | H8 | sing | 1.08Å | 1.08Å | |
N1 | H9 | sing | 0.97Å | 1.00Å | |
N1 | H10 | sing | 0.97Å | 1.00Å | |
N2 | H11 | sing | 0.97Å | 1.00Å | |
C3 | H12 | sing | 1.08Å | 1.08Å | |
C2 | H13 | sing | 1.08Å | 1.08Å | |
C15 | H14 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O2 | S1 | O1 | 114.2° | 123.2° |
O2 | S1 | C1 | 108.9° | 106.4° |
O2 | S1 | N1 | 108.4° | 106.4° |
C3 | C2 | C1 | 121.3° | 120.1° |
C2 | C3 | C4 | 120.0° | 119.9° |
C2 | C3 | H12 | 120.0° | 120.1° |
C3 | C2 | H13 | 119.3° | 119.9° |
C2 | C1 | S1 | 118.8° | 119.8° |
C2 | C1 | C6 | 119.5° | 120.3° |
C1 | C2 | H13 | 119.4° | 120.0° |
O1 | S1 | C1 | 103.4° | 106.4° |
O1 | S1 | N1 | 115.4° | 106.4° |
C1 | S1 | N1 | 106.0° | 107.2° |
S1 | C1 | C6 | 121.4° | 119.8° |
S1 | N1 | H9 | 109.5° | 120.0° |
S1 | N1 | H10 | 109.5° | 120.0° |
O4 | S2 | O3 | 117.0° | 123.2° |
O4 | S2 | C10 | 113.0° | 106.4° |
O4 | S2 | N2 | 107.4° | 106.4° |
C3 | C4 | C7 | 119.2° | 120.1° |
C3 | C4 | C5 | 119.9° | 119.7° |
C4 | C3 | H12 | 120.0° | 120.1° |
C1 | C6 | C5 | 118.6° | 120.1° |
C1 | C6 | H3 | 120.7° | 120.0° |
O3 | S2 | C10 | 104.9° | 106.4° |
O3 | S2 | N2 | 101.6° | 106.4° |
C10 | S2 | N2 | 112.5° | 107.2° |
S2 | C10 | C11 | 120.6° | 120.0° |
S2 | C10 | C15 | 120.0° | 120.0° |
S2 | N2 | C9 | 109.1° | 120.0° |
S2 | N2 | H11 | 109.6° | 120.0° |
C12 | C11 | C10 | 121.4° | 120.0° |
C11 | C12 | C13 | 118.6° | 120.0° |
C12 | C11 | H4 | 119.3° | 120.0° |
C11 | C12 | H7 | 120.6° | 120.0° |
C11 | C10 | C15 | 119.3° | 120.0° |
C10 | C11 | H4 | 119.3° | 120.0° |
C7 | C4 | C5 | 120.8° | 120.2° |
C4 | C7 | C8 | 172.5° | 180.0° |
C4 | C5 | C6 | 120.7° | 119.9° |
C4 | C5 | H2 | 119.7° | 120.0° |
C12 | C13 | C14 | 120.2° | 120.0° |
C13 | C12 | H7 | 120.7° | 120.0° |
C12 | C13 | H8 | 119.9° | 119.9° |
C10 | C15 | C14 | 117.8° | 120.0° |
C10 | C15 | H14 | 121.1° | 120.0° |
C7 | C8 | C9 | 173.7° | 180.0° |
C6 | C5 | H2 | 119.7° | 120.1° |
C5 | C6 | H3 | 120.7° | 119.9° |
C8 | C9 | N2 | 106.5° | 109.5° |
C8 | C9 | H5 | 110.2° | 109.4° |
C8 | C9 | H6 | 110.2° | 109.5° |
N2 | C9 | H5 | 110.2° | 109.4° |
N2 | C9 | H6 | 110.2° | 109.5° |
C9 | N2 | H11 | 109.5° | 120.0° |
C13 | C14 | C15 | 122.5° | 120.0° |
C13 | C14 | H1 | 118.7° | 120.0° |
C14 | C13 | H8 | 119.9° | 120.0° |
C15 | C14 | H1 | 118.7° | 120.0° |
C14 | C15 | H14 | 121.1° | 120.0° |
H5 | C9 | H6 | 109.5° | 109.5° |
H9 | N1 | H10 | 109.5° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O2 | S1 | C1 | C2 | 16.1° | 23.3° |
O2 | S1 | O1 | C1 | 118.2° | 123.0° |
O2 | S1 | O1 | N1 | 126.6° | 122.9° |
O2 | S1 | C1 | N1 | 116.5° | 113.5° |
O2 | S1 | C1 | C6 | 158.7° | 156.4° |
O2 | S1 | N1 | H9 | 180.0° | 126.5° |
O2 | S1 | N1 | H10 | 60.0° | 53.6° |
C3 | C2 | C1 | H13 | 180.0° | 179.9° |
C3 | C2 | C1 | S1 | 177.8° | 180.0° |
C2 | C3 | C4 | H12 | 180.0° | 180.0° |
C3 | C2 | C1 | C6 | 2.9° | 0.2° |
C2 | C3 | C4 | C7 | 176.6° | 180.0° |
C2 | C3 | C4 | C5 | 0.0° | 0.2° |
C2 | C1 | S1 | O1 | 105.7° | 156.2° |
C2 | C1 | S1 | C6 | 174.8° | 179.8° |
C2 | C1 | S1 | N1 | 132.6° | 90.2° |
C1 | C2 | C3 | C4 | 1.3° | 0.0° |
C2 | C1 | C6 | C5 | 3.3° | 0.3° |
C2 | C1 | C6 | H3 | 176.7° | 179.8° |
C1 | C2 | C3 | H12 | 178.7° | 180.0° |
O1 | S1 | C1 | N1 | 121.7° | 113.5° |
O1 | S1 | C1 | C6 | 79.5° | 23.5° |
O1 | S1 | N1 | H9 | 50.6° | 6.4° |
O1 | S1 | N1 | H10 | 69.4° | 173.5° |
S1 | C1 | C6 | C5 | 178.1° | 180.0° |
S1 | C1 | C6 | H3 | 1.9° | 0.0° |
C1 | S1 | N1 | H9 | 63.2° | 120.0° |
C1 | S1 | N1 | H10 | 176.8° | 60.0° |
S1 | C1 | C2 | H13 | 2.2° | 0.1° |
N1 | S1 | C1 | C6 | 42.2° | 90.0° |
S1 | N1 | H9 | H10 | 120.0° | 179.9° |
O4 | S2 | O3 | C10 | 126.1° | 122.9° |
O4 | S2 | O3 | N2 | 116.6° | 123.0° |
O4 | S2 | C10 | N2 | 121.8° | 113.6° |
O4 | S2 | C10 | C11 | 15.7° | 23.5° |
O4 | S2 | C10 | C15 | 164.8° | 156.2° |
O4 | S2 | N2 | C9 | 55.5° | 178.5° |
O4 | S2 | N2 | H11 | 64.4° | 1.5° |
C3 | C4 | C7 | C5 | 176.6° | 179.8° |
C3 | C4 | C7 | C8 | 76.2° | 176.1° |
C3 | C4 | C5 | C6 | 0.5° | 0.2° |
C3 | C4 | C5 | H2 | 179.5° | 179.7° |
C4 | C3 | C2 | H13 | 178.7° | 180.0° |
C1 | C6 | C5 | C4 | 2.1° | 0.1° |
C1 | C6 | C5 | H3 | 180.0° | 179.9° |
C1 | C6 | C5 | H2 | 177.9° | 180.0° |
C6 | C1 | C2 | H13 | 177.1° | 179.7° |
O3 | S2 | C10 | N2 | 109.6° | 113.5° |
O3 | S2 | C10 | C11 | 144.3° | 156.4° |
O3 | S2 | C10 | C15 | 36.2° | 23.3° |
O3 | S2 | N2 | C9 | 178.9° | 48.5° |
O3 | S2 | N2 | H11 | 59.0° | 131.5° |
S2 | C10 | C11 | C12 | 179.3° | 180.0° |
S2 | C10 | C11 | C15 | 179.5° | 179.7° |
C10 | S2 | N2 | C9 | 69.4° | 64.9° |
S2 | C10 | C15 | C14 | 179.8° | 179.8° |
S2 | C10 | C11 | H4 | 0.7° | 0.2° |
C10 | S2 | N2 | H11 | 170.6° | 115.0° |
S2 | C10 | C15 | H14 | 0.2° | 0.3° |
N2 | S2 | C10 | C11 | 106.1° | 90.0° |
N2 | S2 | C10 | C15 | 73.4° | 90.3° |
S2 | N2 | C9 | C8 | 112.3° | 165.0° |
S2 | N2 | C9 | H11 | 119.9° | 180.0° |
S2 | N2 | C9 | H5 | 7.3° | 45.0° |
S2 | N2 | C9 | H6 | 128.2° | 75.0° |
C12 | C11 | C10 | H4 | 180.0° | 179.8° |
C11 | C12 | C13 | H7 | 180.0° | 179.9° |
C12 | C11 | C10 | C15 | 0.2° | 0.2° |
C11 | C12 | C13 | C14 | 4.6° | 0.1° |
C11 | C12 | C13 | H8 | 175.4° | 179.9° |
C10 | C11 | C12 | C13 | 2.8° | 0.2° |
C11 | C10 | C15 | C14 | 0.7° | 0.0° |
C10 | C11 | C12 | H7 | 177.2° | 180.0° |
C11 | C10 | C15 | H14 | 179.3° | 180.0° |
C7 | C4 | C5 | C6 | 177.1° | 180.0° |
C4 | C7 | C8 | C9 | 11.7° | 37.1° |
C7 | C4 | C5 | H2 | 2.9° | 0.0° |
C7 | C4 | C3 | H12 | 3.4° | 0.0° |
C5 | C4 | C7 | C8 | 100.4° | 3.7° |
C4 | C5 | C6 | H2 | 180.0° | 179.9° |
C4 | C5 | C6 | H3 | 177.9° | 180.0° |
C5 | C4 | C3 | H12 | 180.0° | 179.8° |
C12 | C13 | C14 | H8 | 180.0° | 180.0° |
C12 | C13 | C14 | C15 | 3.8° | 0.3° |
C12 | C13 | C14 | H1 | 176.2° | 179.9° |
C13 | C12 | C11 | H4 | 177.2° | 180.0° |
C10 | C15 | C14 | C13 | 1.1° | 0.2° |
C10 | C15 | C14 | H14 | 180.0° | 180.0° |
C10 | C15 | C14 | H1 | 178.9° | 180.0° |
C15 | C10 | C11 | H4 | 179.8° | 179.9° |
C7 | C8 | C9 | N2 | 168.9° | 19.3° |
C7 | C8 | C9 | H5 | 49.4° | 139.2° |
C7 | C8 | C9 | H6 | 71.6° | 100.8° |
C8 | C9 | N2 | H5 | 119.5° | 120.0° |
C8 | C9 | N2 | H6 | 119.6° | 120.1° |
C8 | C9 | H5 | H6 | 121.4° | 120.0° |
C8 | C9 | N2 | H11 | 7.7° | 15.1° |
N2 | C9 | H5 | H6 | 121.4° | 120.0° |
C13 | C14 | C15 | H1 | 180.0° | 179.8° |
C14 | C13 | C12 | H7 | 175.4° | 179.8° |
C13 | C14 | C15 | H14 | 178.9° | 179.7° |
C15 | C14 | C13 | H8 | 176.2° | 179.7° |
H1 | C14 | C13 | H8 | 3.8° | 0.0° |
H1 | C14 | C15 | H14 | 1.1° | 0.0° |
H2 | C5 | C6 | H3 | 2.1° | 0.1° |
H4 | C11 | C12 | H7 | 2.8° | 0.1° |
H5 | C9 | N2 | H11 | 127.2° | 135.0° |
H6 | C9 | N2 | H11 | 111.9° | 105.0° |
H7 | C12 | C13 | H8 | 4.6° | 0.2° |
H12 | C3 | C2 | H13 | 1.2° | 0.1° |