GH5
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O1 | C4 | doub | 1.21Å | 1.23Å | |
F2 | C1 | sing | 1.40Å | 1.29Å | |
C2 | C1 | sing | 1.53Å | 1.47Å | |
C2 | C3 | sing | 1.53Å | 1.59Å | |
C1 | F3 | sing | 1.40Å | 1.34Å | |
C1 | F1 | sing | 1.40Å | 1.29Å | |
C4 | C3 | sing | 1.51Å | 1.51Å | |
C4 | N1 | sing | 1.35Å | 1.43Å | |
C9 | C8 | sing | 1.53Å | 1.51Å | |
C9 | N1 | sing | 1.47Å | 1.46Å | |
C8 | C7 | sing | 1.53Å | 1.53Å | |
N1 | C5 | sing | 1.47Å | 1.51Å | |
C16 | C17 | doub | 1.38Å | 1.39Å | Aromatic |
C16 | C15 | sing | 1.38Å | 1.37Å | Aromatic |
C17 | C12 | sing | 1.39Å | 1.37Å | Aromatic |
N3 | C10 | doub | 1.31Å | 1.34Å | Aromatic |
N3 | C11 | sing | 1.35Å | 1.35Å | Aromatic |
C7 | C6 | sing | 1.53Å | 1.48Å | |
C7 | C10 | sing | 1.51Å | 1.47Å | |
C15 | C14 | doub | 1.38Å | 1.38Å | Aromatic |
C5 | C6 | sing | 1.53Å | 1.53Å | |
C12 | C11 | sing | 1.48Å | 1.49Å | |
C12 | C13 | doub | 1.39Å | 1.38Å | Aromatic |
C10 | O2 | sing | 1.34Å | 1.25Å | Aromatic |
C11 | N2 | doub | 1.31Å | 1.33Å | Aromatic |
C14 | C13 | sing | 1.38Å | 1.39Å | Aromatic |
O2 | N2 | sing | 1.21Å | 1.35Å | Aromatic |
C14 | H1 | sing | 1.08Å | 1.08Å | |
C5 | H2 | sing | 1.09Å | 1.10Å | |
C5 | H3 | sing | 1.09Å | 1.10Å | |
C6 | H4 | sing | 1.09Å | 1.10Å | |
C6 | H5 | sing | 1.09Å | 1.10Å | |
C7 | H6 | sing | 1.09Å | 1.10Å | |
C8 | H7 | sing | 1.09Å | 1.10Å | |
C8 | H8 | sing | 1.09Å | 1.10Å | |
C9 | H9 | sing | 1.09Å | 1.10Å | |
C9 | H10 | sing | 1.09Å | 1.10Å | |
C13 | H11 | sing | 1.08Å | 1.08Å | |
C3 | H12 | sing | 1.09Å | 1.10Å | |
C3 | H13 | sing | 1.09Å | 1.10Å | |
C2 | H14 | sing | 1.09Å | 1.10Å | |
C2 | H15 | sing | 1.09Å | 1.10Å | |
C15 | H16 | sing | 1.08Å | 1.08Å | |
C16 | H17 | sing | 1.08Å | 1.08Å | |
C17 | H18 | sing | 1.08Å | 1.08Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1 | C4 | C3 | 115.9° | 120.0° |
O1 | C4 | N1 | 117.4° | 119.9° |
F2 | C1 | C2 | 113.2° | 109.5° |
F2 | C1 | F3 | 111.1° | 109.4° |
F2 | C1 | F1 | 107.9° | 109.5° |
C1 | C2 | C3 | 105.8° | 109.5° |
C2 | C1 | F3 | 108.6° | 109.5° |
C2 | C1 | F1 | 105.6° | 109.5° |
C1 | C2 | H14 | 110.4° | 109.5° |
C1 | C2 | H15 | 110.4° | 109.5° |
C2 | C3 | C4 | 102.4° | 109.5° |
C2 | C3 | H12 | 111.2° | 109.5° |
C2 | C3 | H13 | 111.2° | 109.4° |
C3 | C2 | H14 | 110.4° | 109.5° |
C3 | C2 | H15 | 110.4° | 109.4° |
F3 | C1 | F1 | 110.3° | 109.4° |
C3 | C4 | N1 | 126.4° | 120.0° |
C4 | C3 | H12 | 111.2° | 109.5° |
C4 | C3 | H13 | 111.2° | 109.5° |
C4 | N1 | C9 | 120.8° | 120.7° |
C4 | N1 | C5 | 117.8° | 120.6° |
C8 | C9 | N1 | 112.8° | 108.8° |
C9 | C8 | C7 | 106.7° | 109.3° |
C9 | C8 | H7 | 110.1° | 109.5° |
C9 | C8 | H8 | 110.2° | 109.5° |
C8 | C9 | H9 | 108.6° | 109.6° |
C8 | C9 | H10 | 108.6° | 109.6° |
C9 | N1 | C5 | 120.2° | 118.7° |
N1 | C9 | H9 | 108.7° | 109.6° |
N1 | C9 | H10 | 108.6° | 109.6° |
C8 | C7 | C6 | 108.7° | 109.5° |
C8 | C7 | C10 | 109.7° | 109.4° |
C8 | C7 | H6 | 109.3° | 109.5° |
C7 | C8 | H7 | 110.2° | 109.5° |
C7 | C8 | H8 | 110.1° | 109.4° |
N1 | C5 | C6 | 112.1° | 108.8° |
N1 | C5 | H2 | 108.8° | 109.6° |
N1 | C5 | H3 | 108.8° | 109.8° |
C17 | C16 | C15 | 119.6° | 120.2° |
C16 | C17 | C12 | 121.5° | 119.8° |
C17 | C16 | H17 | 120.2° | 119.9° |
C16 | C17 | H18 | 119.2° | 120.1° |
C16 | C15 | C14 | 119.5° | 120.2° |
C16 | C15 | H16 | 120.2° | 119.9° |
C15 | C16 | H17 | 120.2° | 119.9° |
C17 | C12 | C11 | 122.6° | 120.1° |
C17 | C12 | C13 | 118.4° | 119.8° |
C12 | C17 | H18 | 119.2° | 120.1° |
C10 | N3 | C11 | 109.2° | 105.5° |
N3 | C10 | C7 | 127.3° | 126.4° |
N3 | C10 | O2 | 109.8° | 107.1° |
N3 | C11 | C12 | 128.4° | 126.4° |
N3 | C11 | N2 | 103.2° | 107.2° |
C6 | C7 | C10 | 108.8° | 109.5° |
C7 | C6 | C5 | 110.1° | 109.3° |
C7 | C6 | H4 | 109.3° | 109.5° |
C7 | C6 | H5 | 109.3° | 109.5° |
C6 | C7 | H6 | 110.0° | 109.5° |
C7 | C10 | O2 | 122.9° | 126.5° |
C10 | C7 | H6 | 110.2° | 109.4° |
C15 | C14 | C13 | 120.0° | 120.1° |
C15 | C14 | H1 | 120.0° | 119.9° |
C14 | C15 | H16 | 120.2° | 119.8° |
C6 | C5 | H2 | 108.8° | 109.6° |
C6 | C5 | H3 | 108.8° | 109.6° |
C5 | C6 | H4 | 109.3° | 109.5° |
C5 | C6 | H5 | 109.3° | 109.5° |
C11 | C12 | C13 | 118.7° | 120.1° |
C12 | C11 | N2 | 128.3° | 126.4° |
C12 | C13 | C14 | 120.7° | 119.9° |
C12 | C13 | H11 | 119.6° | 120.1° |
C10 | O2 | N2 | 106.9° | 110.0° |
C11 | N2 | O2 | 110.8° | 110.1° |
C13 | C14 | H1 | 120.0° | 120.0° |
C14 | C13 | H11 | 119.6° | 120.0° |
H2 | C5 | H3 | 109.4° | 109.5° |
H4 | C6 | H5 | 109.5° | 109.5° |
H7 | C8 | H8 | 109.5° | 109.6° |
H9 | C9 | H10 | 109.5° | 109.7° |
H12 | C3 | H13 | 109.5° | 109.5° |
H14 | C2 | H15 | 109.5° | 109.4° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1 | C4 | C3 | C2 | 11.9° | 0.2° |
O1 | C4 | C3 | N1 | 174.1° | 179.8° |
O1 | C4 | N1 | C9 | 0.7° | 0.2° |
O1 | C4 | N1 | C5 | 168.4° | 179.7° |
O1 | C4 | C3 | H12 | 106.9° | 120.3° |
O1 | C4 | C3 | H13 | 130.8° | 119.7° |
F2 | C1 | C2 | F3 | 123.9° | 120.0° |
F2 | C1 | C2 | F1 | 117.8° | 120.1° |
F2 | C1 | C2 | C3 | 166.3° | 180.0° |
F2 | C1 | F3 | F1 | 119.5° | 120.0° |
F2 | C1 | C2 | H14 | 74.3° | 60.0° |
F2 | C1 | C2 | H15 | 46.9° | 60.0° |
C1 | C2 | C3 | H14 | 119.4° | 120.0° |
C1 | C2 | C3 | H15 | 119.4° | 120.0° |
C2 | C1 | F3 | F1 | 115.3° | 120.0° |
C1 | C2 | C3 | C4 | 167.6° | 180.0° |
C1 | C2 | C3 | H12 | 48.8° | 60.0° |
C1 | C2 | C3 | H13 | 73.5° | 60.0° |
C1 | C2 | H14 | H15 | 121.7° | 120.0° |
C3 | C2 | C1 | F3 | 69.8° | 60.0° |
C3 | C2 | C1 | F1 | 48.5° | 59.9° |
C2 | C3 | C4 | H12 | 118.9° | 120.0° |
C2 | C3 | C4 | H13 | 118.9° | 120.0° |
C2 | C3 | C4 | N1 | 173.9° | 180.0° |
C2 | C3 | H12 | H13 | 123.3° | 120.0° |
C3 | C2 | H14 | H15 | 121.7° | 119.9° |
F3 | C1 | C2 | H14 | 49.6° | 60.0° |
F3 | C1 | C2 | H15 | 170.8° | 180.0° |
F1 | C1 | C2 | H14 | 167.9° | 180.0° |
F1 | C1 | C2 | H15 | 71.0° | 60.1° |
C3 | C4 | N1 | C9 | 173.4° | 180.0° |
C3 | C4 | N1 | C5 | 5.6° | 0.0° |
C4 | C3 | H12 | H13 | 123.3° | 120.0° |
C4 | C3 | C2 | H14 | 73.0° | 60.0° |
C4 | C3 | C2 | H15 | 48.2° | 60.0° |
C4 | N1 | C9 | C8 | 153.7° | 126.4° |
C4 | N1 | C9 | C5 | 167.5° | 180.0° |
C4 | N1 | C5 | C6 | 158.5° | 126.4° |
C4 | N1 | C5 | H2 | 81.1° | 6.6° |
C4 | N1 | C5 | H3 | 38.1° | 113.7° |
C4 | N1 | C9 | H9 | 85.8° | 113.8° |
C4 | N1 | C9 | H10 | 33.2° | 6.6° |
N1 | C4 | C3 | H12 | 67.2° | 60.0° |
N1 | C4 | C3 | H13 | 55.1° | 60.1° |
C8 | C9 | N1 | H9 | 120.5° | 119.8° |
C8 | C9 | N1 | H10 | 120.5° | 119.8° |
C9 | C8 | C7 | H7 | 119.6° | 120.0° |
C9 | C8 | C7 | H8 | 119.6° | 119.9° |
C8 | C9 | N1 | C5 | 38.8° | 53.6° |
C9 | C8 | C7 | C6 | 68.4° | 61.3° |
C9 | C8 | C7 | C10 | 172.7° | 178.6° |
C9 | C8 | C7 | H6 | 51.7° | 58.7° |
C9 | C8 | H7 | H8 | 121.3° | 120.1° |
C8 | C9 | H9 | H10 | 118.4° | 120.3° |
N1 | C9 | C8 | C7 | 53.4° | 54.6° |
C9 | N1 | C5 | C6 | 33.7° | 53.7° |
C9 | N1 | C5 | H2 | 86.7° | 173.4° |
C9 | N1 | C5 | H3 | 154.1° | 66.3° |
N1 | C9 | C8 | H7 | 66.2° | 174.6° |
N1 | C9 | C8 | H8 | 172.9° | 65.2° |
N1 | C9 | H9 | H10 | 118.5° | 120.4° |
C8 | C7 | C10 | N3 | 2.0° | 119.5° |
C8 | C7 | C6 | C10 | 119.4° | 120.0° |
C8 | C7 | C6 | H6 | 119.7° | 120.0° |
C8 | C7 | C10 | H6 | 120.4° | 119.9° |
C8 | C7 | C6 | C5 | 65.1° | 61.4° |
C8 | C7 | C10 | O2 | 179.4° | 60.1° |
C8 | C7 | C6 | H4 | 55.0° | 178.7° |
C8 | C7 | C6 | H5 | 174.8° | 58.6° |
C7 | C8 | H7 | H8 | 121.3° | 120.0° |
C7 | C8 | C9 | H9 | 67.1° | 65.2° |
C7 | C8 | C9 | H10 | 173.9° | 174.4° |
N1 | C5 | C6 | C7 | 45.6° | 54.7° |
N1 | C5 | C6 | H2 | 120.4° | 119.8° |
N1 | C5 | C6 | H3 | 120.4° | 120.0° |
N1 | C5 | H2 | H3 | 118.8° | 120.4° |
N1 | C5 | C6 | H4 | 74.5° | 174.6° |
N1 | C5 | C6 | H5 | 165.7° | 65.3° |
C5 | N1 | C9 | H9 | 81.7° | 66.2° |
C5 | N1 | C9 | H10 | 159.3° | 173.4° |
C17 | C16 | C15 | H17 | 180.0° | 179.7° |
C16 | C17 | C12 | H18 | 180.0° | 179.6° |
C17 | C16 | C15 | C14 | 4.0° | 0.0° |
C16 | C17 | C12 | C11 | 176.6° | 180.0° |
C16 | C17 | C12 | C13 | 2.0° | 0.6° |
C17 | C16 | C15 | H16 | 176.0° | 180.0° |
C15 | C16 | C17 | C12 | 0.8° | 0.3° |
C16 | C15 | C14 | H16 | 180.0° | 180.0° |
C16 | C15 | C14 | C13 | 4.3° | 0.0° |
C16 | C15 | C14 | H1 | 175.7° | 179.7° |
C15 | C16 | C17 | H18 | 179.2° | 180.0° |
C17 | C12 | C11 | N3 | 9.7° | 0.2° |
C17 | C12 | C11 | C13 | 174.5° | 179.4° |
C17 | C12 | C11 | N2 | 172.8° | 179.4° |
C17 | C12 | C13 | C14 | 1.7° | 0.6° |
C17 | C12 | C13 | H11 | 178.3° | 179.5° |
C12 | C17 | C16 | H17 | 179.2° | 180.0° |
N3 | C10 | C7 | C6 | 116.9° | 120.4° |
N3 | C10 | C7 | O2 | 178.7° | 179.6° |
C10 | N3 | C11 | C12 | 179.0° | 179.8° |
C10 | N3 | C11 | N2 | 1.1° | 0.0° |
N3 | C10 | O2 | N2 | 1.3° | 0.4° |
N3 | C10 | C7 | H6 | 122.4° | 0.5° |
C11 | N3 | C10 | C7 | 178.7° | 179.9° |
N3 | C11 | C12 | N2 | 177.5° | 179.7° |
N3 | C11 | C12 | C13 | 164.9° | 179.7° |
C11 | N3 | C10 | O2 | 0.1° | 0.2° |
N3 | C11 | N2 | O2 | 1.9° | 0.3° |
C6 | C7 | C10 | H6 | 120.7° | 120.0° |
C7 | C6 | C5 | H4 | 120.1° | 119.9° |
C7 | C6 | C5 | H5 | 120.1° | 120.0° |
C6 | C7 | C10 | O2 | 61.8° | 59.9° |
C7 | C6 | C5 | H2 | 74.8° | 174.5° |
C7 | C6 | C5 | H3 | 166.0° | 65.3° |
C7 | C6 | H4 | H5 | 119.7° | 120.1° |
C6 | C7 | C8 | H7 | 51.1° | 178.7° |
C6 | C7 | C8 | H8 | 172.0° | 58.6° |
C10 | C7 | C6 | C5 | 175.5° | 178.6° |
C7 | C10 | O2 | N2 | 177.6° | 179.9° |
C10 | C7 | C6 | H4 | 64.4° | 58.7° |
C10 | C7 | C6 | H5 | 55.4° | 61.4° |
C10 | C7 | C8 | H7 | 67.8° | 58.7° |
C10 | C7 | C8 | H8 | 53.1° | 61.5° |
C15 | C14 | C13 | C12 | 1.4° | 0.3° |
C15 | C14 | C13 | H1 | 180.0° | 179.7° |
C15 | C14 | C13 | H11 | 178.5° | 179.8° |
C14 | C15 | C16 | H17 | 176.0° | 179.8° |
C6 | C5 | H2 | H3 | 118.8° | 120.3° |
C5 | C6 | H4 | H5 | 119.7° | 120.1° |
C5 | C6 | C7 | H6 | 54.6° | 58.7° |
C11 | C12 | C13 | C14 | 176.5° | 180.0° |
C12 | C11 | N2 | O2 | 179.8° | 180.0° |
C11 | C12 | C13 | H11 | 3.5° | 0.1° |
C11 | C12 | C17 | H18 | 3.4° | 0.3° |
C13 | C12 | C11 | N2 | 12.6° | 0.0° |
C12 | C13 | C14 | H11 | 180.0° | 179.9° |
C12 | C13 | C14 | H1 | 178.5° | 180.0° |
C13 | C12 | C17 | H18 | 178.0° | 179.8° |
C10 | O2 | N2 | C11 | 2.0° | 0.4° |
O2 | C10 | C7 | H6 | 59.0° | 179.9° |
C13 | C14 | C15 | H16 | 175.7° | 180.0° |
H1 | C14 | C13 | H11 | 1.5° | 0.1° |
H1 | C14 | C15 | H16 | 4.3° | 0.3° |
H2 | C5 | C6 | H4 | 165.1° | 65.6° |
H2 | C5 | C6 | H5 | 45.3° | 54.5° |
H3 | C5 | C6 | H4 | 45.9° | 54.6° |
H3 | C5 | C6 | H5 | 73.9° | 174.7° |
H4 | C6 | C7 | H6 | 174.7° | 61.3° |
H5 | C6 | C7 | H6 | 65.5° | 178.7° |
H6 | C7 | C8 | H7 | 171.3° | 61.3° |
H6 | C7 | C8 | H8 | 67.8° | 178.6° |
H7 | C8 | C9 | H9 | 173.3° | 54.7° |
H7 | C8 | C9 | H10 | 54.3° | 65.6° |
H8 | C8 | C9 | H9 | 52.4° | 174.9° |
H8 | C8 | C9 | H10 | 66.6° | 54.6° |
H12 | C3 | C2 | H14 | 168.2° | 180.0° |
H12 | C3 | C2 | H15 | 70.6° | 60.0° |
H13 | C3 | C2 | H14 | 45.9° | 60.0° |
H13 | C3 | C2 | H15 | 167.0° | 179.9° |
H16 | C15 | C16 | H17 | 4.0° | 0.2° |
H17 | C16 | C17 | H18 | 0.8° | 0.3° |