GGB
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.49Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | CG | sing | 1.53Å | 1.54Å | |
CB | HCB1 | sing | 1.09Å | 1.10Å | |
CB | HCB2 | sing | 1.09Å | 1.10Å | |
CG | OD | sing | 1.43Å | 1.44Å | |
CG | HCG1 | sing | 1.09Å | 1.10Å | |
CG | HCG2 | sing | 1.09Å | 1.10Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | OXT | sing | 1.34Å | 1.25Å | |
OD | NE | sing | 1.41Å | 1.33Å | |
NE | CZ | sing | 1.37Å | 1.34Å | |
NE | HNE | sing | 0.97Å | 1.00Å | |
CZ | NH1 | doub | 1.30Å | 1.32Å | |
CZ | NH2 | sing | 1.37Å | 1.32Å | |
NH1 | HN1 | sing | 0.97Å | 1.00Å | |
NH2 | HN21 | sing | 0.97Å | 1.00Å | |
NH2 | HN22 | sing | 0.97Å | 1.00Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 109.5° | 106.7° |
CA | N | H2 | 109.5° | 106.6° |
N | CA | CB | 110.8° | 109.5° |
N | CA | C | 109.3° | 109.5° |
N | CA | HA | 108.8° | 109.5° |
H | N | H2 | 109.5° | 106.7° |
CB | CA | C | 109.6° | 109.5° |
CB | CA | HA | 108.4° | 109.5° |
CA | CB | CG | 116.3° | 109.5° |
CA | CB | HCB1 | 105.7° | 109.4° |
CA | CB | HCB2 | 107.3° | 109.5° |
C | CA | HA | 109.9° | 109.4° |
CA | C | O | 118.7° | 120.0° |
CA | C | OXT | 118.9° | 120.0° |
CG | CB | HCB1 | 105.7° | 109.5° |
CG | CB | HCB2 | 107.2° | 109.5° |
CB | CG | OD | 112.6° | 109.6° |
CB | CG | HCG1 | 107.7° | 109.4° |
CB | CG | HCG2 | 108.5° | 109.5° |
HCB1 | CB | HCB2 | 114.9° | 109.5° |
OD | CG | HCG1 | 107.8° | 109.5° |
OD | CG | HCG2 | 108.4° | 109.5° |
CG | OD | NE | 110.9° | 106.9° |
HCG1 | CG | HCG2 | 112.0° | 109.4° |
O | C | OXT | 122.4° | 120.0° |
C | OXT | HXT | 109.5° | 120.0° |
OD | NE | CZ | 120.1° | 120.1° |
OD | NE | HNE | 120.0° | 119.9° |
CZ | NE | HNE | 120.0° | 120.0° |
NE | CZ | NH1 | 121.5° | 120.0° |
NE | CZ | NH2 | 119.7° | 120.1° |
NH1 | CZ | NH2 | 118.8° | 119.9° |
CZ | NH1 | HN1 | 110.8° | 120.0° |
CZ | NH2 | HN21 | 124.6° | 120.1° |
CZ | NH2 | HN22 | 110.9° | 120.0° |
HN21 | NH2 | HN22 | 124.6° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 120.0° | 113.7° |
N | CA | CB | C | 120.7° | 120.0° |
N | CA | CB | HA | 119.3° | 120.0° |
N | CA | C | HA | 119.3° | 119.9° |
N | CA | CB | CG | 59.2° | 59.9° |
N | CA | CB | HCB1 | 176.1° | 60.0° |
N | CA | CB | HCB2 | 60.8° | 180.0° |
N | CA | C | O | 10.9° | 30.0° |
N | CA | C | OXT | 169.1° | 150.0° |
H | N | CA | CB | 126.0° | 53.8° |
H | N | CA | C | 5.1° | 173.8° |
H | N | CA | HA | 115.0° | 66.2° |
H2 | N | CA | CB | 114.0° | 60.0° |
H2 | N | CA | C | 125.1° | 60.0° |
H2 | N | CA | HA | 5.0° | 180.0° |
CB | CA | C | HA | 119.1° | 120.0° |
CA | CB | CG | HCB1 | 116.9° | 120.0° |
CA | CB | CG | HCB2 | 120.0° | 120.0° |
CA | CB | HCB1 | HCB2 | 118.1° | 119.9° |
CA | CB | CG | OD | 160.5° | 180.0° |
CA | CB | CG | HCG1 | 41.8° | 60.0° |
CA | CB | CG | HCG2 | 79.6° | 59.9° |
CB | CA | C | O | 110.7° | 90.0° |
CB | CA | C | OXT | 69.3° | 90.0° |
C | CA | CB | CG | 179.9° | 180.0° |
C | CA | CB | HCB1 | 63.2° | 60.0° |
C | CA | CB | HCB2 | 59.9° | 60.0° |
CA | C | O | OXT | 180.0° | 180.0° |
CA | C | OXT | HXT | 180.0° | 180.0° |
HA | CA | CB | CG | 60.1° | 60.0° |
HA | CA | CB | HCB1 | 56.8° | 180.0° |
HA | CA | CB | HCB2 | 179.9° | 60.0° |
HA | CA | C | O | 130.2° | 150.0° |
HA | CA | C | OXT | 49.8° | 30.0° |
CG | CB | HCB1 | HCB2 | 118.1° | 120.0° |
CB | CG | OD | HCG1 | 118.6° | 120.0° |
CB | CG | OD | HCG2 | 120.0° | 120.1° |
CB | CG | HCG1 | HCG2 | 119.2° | 119.9° |
CB | CG | OD | NE | 34.3° | 180.0° |
HCB1 | CB | CG | OD | 82.6° | 60.0° |
HCB1 | CB | CG | HCG1 | 158.7° | 179.9° |
HCB1 | CB | CG | HCG2 | 37.3° | 60.1° |
HCB2 | CB | CG | OD | 40.4° | 60.0° |
HCB2 | CB | CG | HCG1 | 78.2° | 60.1° |
HCB2 | CB | CG | HCG2 | 160.4° | 180.0° |
OD | CG | HCG1 | HCG2 | 119.1° | 120.0° |
CG | OD | NE | CZ | 177.8° | 180.0° |
CG | OD | NE | HNE | 2.2° | 0.0° |
HCG1 | CG | OD | NE | 84.3° | 60.0° |
HCG2 | CG | OD | NE | 154.3° | 60.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
OD | NE | CZ | HNE | 180.0° | 179.9° |
OD | NE | CZ | NH1 | 14.0° | 0.0° |
OD | NE | CZ | NH2 | 165.2° | 180.0° |
NE | CZ | NH1 | NH2 | 179.2° | 180.0° |
NE | CZ | NH1 | HN1 | 180.0° | 180.0° |
NE | CZ | NH2 | HN21 | 179.6° | 179.9° |
NE | CZ | NH2 | HN22 | 0.4° | 0.0° |
HNE | NE | CZ | NH1 | 166.1° | 179.9° |
HNE | NE | CZ | NH2 | 14.8° | 0.0° |
NH1 | CZ | NH2 | HN21 | 0.4° | 0.1° |
NH1 | CZ | NH2 | HN22 | 179.6° | 179.9° |
NH2 | CZ | NH1 | HN1 | 0.8° | 0.0° |
CZ | NH2 | HN21 | HN22 | 180.0° | 179.9° |