GF2
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| P | O5' | sing | 1.61Å | 1.62Å | |
| N1 | C2 | sing | 1.36Å | 1.35Å | |
| C2 | N3 | doub | 1.31Å | 1.33Å | |
| C2 | N2 | sing | 1.37Å | 1.31Å | |
| C4 | N3 | sing | 1.34Å | 1.37Å | |
| C5 | C4 | doub | 1.40Å | 1.38Å | Aromatic |
| C6 | N1 | sing | 1.35Å | 1.38Å | |
| C6 | C5 | sing | 1.41Å | 1.44Å | |
| O6 | C6 | doub | 1.22Å | 1.23Å | |
| N7 | C5 | sing | 1.36Å | 1.40Å | Aromatic |
| N7 | C8 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | N9 | sing | 1.37Å | 1.37Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
| N9 | C1' | sing | 1.47Å | 1.48Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| OP2 | P | sing | 1.61Å | 1.49Å | |
| C2' | F | sing | 1.40Å | 1.39Å | |
| C2' | C1' | sing | 1.54Å | 1.53Å | |
| OP1 | P | doub | 1.48Å | 1.49Å | |
| C3' | C2' | sing | 1.54Å | 1.53Å | |
| C3' | C4' | sing | 1.54Å | 1.54Å | |
| O3' | C3' | sing | 1.43Å | 1.42Å | |
| C4' | O4' | sing | 1.44Å | 1.43Å | |
| C5' | C4' | sing | 1.53Å | 1.54Å | |
| O5' | C5' | sing | 1.43Å | 1.42Å | |
| P | OP3 | sing | 1.61Å | 1.72Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N2 | HN2 | sing | 0.97Å | 1.00Å | |
| N2 | HN2A | sing | 0.97Å | 1.00Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O5' | P | OP2 | 108.5° | 109.4° |
| O5' | P | OP1 | 107.6° | 109.5° |
| P | O5' | C5' | 121.1° | 123.1° |
| O5' | P | OP3 | 119.8° | 109.5° |
| N1 | C2 | N3 | 125.0° | 121.9° |
| N1 | C2 | N2 | 117.1° | 119.1° |
| C2 | N1 | C6 | 123.7° | 120.4° |
| C2 | N1 | HN1 | 118.2° | 119.8° |
| N3 | C2 | N2 | 117.8° | 119.0° |
| C2 | N3 | C4 | 112.8° | 121.2° |
| C2 | N2 | HN2 | 120.0° | 120.0° |
| C2 | N2 | HN2A | 120.0° | 120.0° |
| N3 | C4 | C5 | 127.0° | 119.6° |
| N3 | C4 | N9 | 126.5° | 134.2° |
| C4 | C5 | C6 | 118.0° | 118.6° |
| C4 | C5 | N7 | 110.2° | 107.2° |
| C5 | C4 | N9 | 106.5° | 106.1° |
| N1 | C6 | C5 | 113.5° | 118.3° |
| N1 | C6 | O6 | 117.1° | 120.8° |
| C6 | N1 | HN1 | 118.1° | 119.8° |
| C5 | C6 | O6 | 129.4° | 120.8° |
| C6 | C5 | N7 | 131.8° | 134.1° |
| C5 | N7 | C8 | 103.7° | 109.3° |
| N7 | C8 | N9 | 114.3° | 109.8° |
| N7 | C8 | H8 | 122.9° | 125.1° |
| C8 | N9 | C4 | 105.3° | 107.5° |
| C8 | N9 | C1' | 129.4° | 126.2° |
| N9 | C8 | H8 | 122.8° | 125.1° |
| C4 | N9 | C1' | 125.3° | 126.3° |
| N9 | C1' | O4' | 110.8° | 110.4° |
| N9 | C1' | C2' | 110.6° | 110.4° |
| N9 | C1' | H1' | 106.8° | 110.3° |
| O4' | C1' | C2' | 106.2° | 104.8° |
| C1' | O4' | C4' | 109.0° | 105.3° |
| O4' | C1' | H1' | 111.2° | 110.4° |
| OP2 | P | OP1 | 118.4° | 109.5° |
| OP2 | P | OP3 | 101.1° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| F | C2' | C1' | 108.0° | 110.5° |
| F | C2' | C3' | 112.8° | 110.5° |
| F | C2' | H2' | 106.2° | 110.5° |
| C1' | C2' | C3' | 102.2° | 104.1° |
| C2' | C1' | H1' | 111.4° | 110.5° |
| C1' | C2' | H2' | 116.1° | 110.5° |
| OP1 | P | OP3 | 102.0° | 109.5° |
| C2' | C3' | C4' | 98.5° | 104.1° |
| C2' | C3' | O3' | 113.3° | 110.5° |
| C3' | C2' | H2' | 111.7° | 110.7° |
| C2' | C3' | H3' | 115.7° | 110.6° |
| C4' | C3' | O3' | 113.6° | 110.4° |
| C3' | C4' | O4' | 106.4° | 104.8° |
| C3' | C4' | C5' | 114.4° | 110.4° |
| C4' | C3' | H3' | 115.4° | 110.5° |
| C3' | C4' | H4' | 109.2° | 110.4° |
| O3' | C3' | H3' | 101.1° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| O4' | C4' | C5' | 112.0° | 110.3° |
| O4' | C4' | H4' | 111.7° | 110.4° |
| C4' | C5' | O5' | 113.0° | 109.5° |
| C5' | C4' | H4' | 103.3° | 110.4° |
| C4' | C5' | H5' | 108.3° | 109.5° |
| C4' | C5' | H5'A | 108.3° | 109.5° |
| O5' | C5' | H5' | 108.3° | 109.4° |
| O5' | C5' | H5'A | 108.3° | 109.5° |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| HN2 | N2 | HN2A | 120.0° | 120.0° |
| H5' | C5' | H5'A | 110.6° | 109.5° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O5' | P | OP2 | OP1 | 122.9° | 120.0° |
| O5' | P | OP2 | OP3 | 126.9° | 120.0° |
| O5' | P | OP1 | OP3 | 126.9° | 120.0° |
| P | O5' | C5' | C4' | 176.8° | 180.0° |
| O5' | P | OP2 | HOP2 | 122.9° | 60.0° |
| P | O5' | C5' | H5' | 56.8° | 60.0° |
| P | O5' | C5' | H5'A | 63.2° | 59.9° |
| O5' | P | OP3 | HOP3 | 118.6° | 180.0° |
| N1 | C2 | N3 | N2 | 178.1° | 179.9° |
| N1 | C2 | N3 | C4 | 0.7° | 0.1° |
| C2 | N1 | C6 | HN1 | 180.0° | 179.8° |
| C2 | N1 | C6 | C5 | 1.4° | 0.4° |
| C2 | N1 | C6 | O6 | 179.0° | 180.0° |
| N1 | C2 | N2 | HN2 | 178.2° | 0.1° |
| N1 | C2 | N2 | HN2A | 1.8° | 180.0° |
| C2 | N3 | C4 | C5 | 0.2° | 0.1° |
| N3 | C2 | N1 | C6 | 1.6° | 0.2° |
| C2 | N3 | C4 | N9 | 179.2° | 179.9° |
| N3 | C2 | N1 | HN1 | 178.4° | 180.0° |
| N3 | C2 | N2 | HN2 | 0.0° | 180.0° |
| N3 | C2 | N2 | HN2A | 180.0° | 0.0° |
| N2 | C2 | N3 | C4 | 178.7° | 180.0° |
| N2 | C2 | N1 | C6 | 179.6° | 179.7° |
| N2 | C2 | N1 | HN1 | 0.4° | 0.0° |
| C2 | N2 | HN2 | HN2A | 180.0° | 180.0° |
| N3 | C4 | C5 | N9 | 179.5° | 180.0° |
| N3 | C4 | C5 | C6 | 0.2° | 0.2° |
| N3 | C4 | C5 | N7 | 179.7° | 180.0° |
| N3 | C4 | N9 | C8 | 179.1° | 180.0° |
| N3 | C4 | N9 | C1' | 0.9° | 0.1° |
| C4 | C5 | C6 | N1 | 0.5° | 0.4° |
| C4 | C5 | C6 | N7 | 179.3° | 179.8° |
| C4 | C5 | C6 | O6 | 179.9° | 180.0° |
| C4 | C5 | N7 | C8 | 0.7° | 0.0° |
| C5 | C4 | N9 | C8 | 0.4° | 0.0° |
| C5 | C4 | N9 | C1' | 179.6° | 180.0° |
| N1 | C6 | C5 | O6 | 179.5° | 179.6° |
| N1 | C6 | C5 | N7 | 178.8° | 179.8° |
| C6 | C5 | N7 | C8 | 178.7° | 179.8° |
| C6 | C5 | C4 | N9 | 179.3° | 179.8° |
| C5 | C6 | N1 | HN1 | 178.6° | 179.8° |
| O6 | C6 | C5 | N7 | 0.7° | 0.2° |
| O6 | C6 | N1 | HN1 | 1.0° | 0.2° |
| C5 | N7 | C8 | N9 | 0.9° | 0.0° |
| N7 | C5 | C4 | N9 | 0.2° | 0.0° |
| C5 | N7 | C8 | H8 | 179.1° | 179.9° |
| N7 | C8 | N9 | H8 | 180.0° | 179.9° |
| N7 | C8 | N9 | C4 | 0.9° | 0.0° |
| N7 | C8 | N9 | C1' | 179.1° | 180.0° |
| C8 | N9 | C4 | C1' | 180.0° | 180.0° |
| C8 | N9 | C1' | O4' | 14.0° | 23.6° |
| C8 | N9 | C1' | C2' | 103.5° | 91.9° |
| C8 | N9 | C1' | H1' | 135.2° | 145.8° |
| C4 | N9 | C1' | O4' | 166.0° | 156.5° |
| C4 | N9 | C1' | C2' | 76.5° | 88.1° |
| C4 | N9 | C8 | H8 | 179.1° | 179.9° |
| C4 | N9 | C1' | H1' | 44.8° | 34.2° |
| N9 | C1' | O4' | C2' | 120.1° | 118.9° |
| N9 | C1' | O4' | H1' | 118.6° | 122.2° |
| N9 | C1' | C2' | F | 151.0° | 98.5° |
| N9 | C1' | C2' | H1' | 118.6° | 122.2° |
| N9 | C1' | C2' | C3' | 89.8° | 142.8° |
| N9 | C1' | O4' | C4' | 113.6° | 159.4° |
| C1' | N9 | C8 | H8 | 0.9° | 0.0° |
| N9 | C1' | C2' | H2' | 32.0° | 24.0° |
| O4' | C1' | C2' | F | 88.8° | 142.6° |
| O4' | C1' | C2' | H1' | 121.2° | 118.9° |
| O4' | C1' | C2' | C3' | 30.4° | 24.0° |
| C1' | O4' | C4' | C3' | 20.3° | 40.5° |
| C1' | O4' | C4' | C5' | 146.0° | 159.3° |
| O4' | C1' | C2' | H2' | 152.2° | 94.8° |
| C1' | O4' | C4' | H4' | 98.7° | 78.4° |
| OP2 | P | OP1 | OP3 | 109.7° | 120.0° |
| OP2 | P | O5' | C5' | 43.0° | 65.0° |
| OP2 | P | OP3 | HOP3 | 122.4° | 60.0° |
| F | C2' | C1' | C3' | 119.1° | 118.6° |
| F | C2' | C1' | H2' | 119.1° | 122.6° |
| F | C2' | C3' | H2' | 119.5° | 122.7° |
| F | C2' | C3' | C4' | 75.7° | 118.6° |
| F | C2' | C3' | O3' | 44.6° | 0.0° |
| F | C2' | C1' | H1' | 32.4° | 23.7° |
| F | C2' | C3' | H3' | 160.7° | 122.7° |
| C1' | C2' | C3' | H2' | 124.8° | 118.7° |
| C1' | C2' | C3' | C4' | 40.0° | 0.0° |
| C1' | C2' | C3' | O3' | 160.3° | 118.6° |
| C2' | C1' | O4' | C4' | 6.5° | 40.5° |
| C1' | C2' | C3' | H3' | 83.5° | 118.7° |
| OP1 | P | O5' | C5' | 172.2° | 55.0° |
| OP1 | P | OP2 | HOP2 | 0.0° | 180.0° |
| OP1 | P | OP3 | HOP3 | 0.0° | 60.0° |
| C2' | C3' | C4' | O3' | 120.1° | 118.7° |
| C2' | C3' | C4' | H3' | 123.7° | 118.7° |
| C2' | C3' | O3' | H3' | 124.4° | 122.7° |
| C2' | C3' | C4' | O4' | 37.7° | 24.0° |
| C2' | C3' | C4' | C5' | 161.9° | 142.8° |
| C3' | C2' | C1' | H1' | 151.6° | 94.9° |
| C2' | C3' | O3' | HO3' | 180.0° | 61.4° |
| C2' | C3' | C4' | H4' | 83.0° | 94.9° |
| C4' | C3' | O3' | H3' | 124.2° | 122.6° |
| C3' | C4' | O4' | C5' | 125.7° | 118.8° |
| C3' | C4' | O4' | H4' | 119.1° | 118.9° |
| C3' | C4' | C5' | H4' | 118.5° | 122.3° |
| C3' | C4' | C5' | O5' | 62.2° | 175.0° |
| C4' | C3' | C2' | H2' | 164.8° | 118.7° |
| C4' | C3' | O3' | HO3' | 68.7° | 176.1° |
| C3' | C4' | C5' | H5' | 177.8° | 55.1° |
| C3' | C4' | C5' | H5'A | 57.8° | 64.9° |
| O3' | C3' | C4' | O4' | 157.9° | 142.7° |
| O3' | C3' | C4' | C5' | 78.0° | 98.6° |
| O3' | C3' | C2' | H2' | 74.9° | 122.7° |
| O3' | C3' | C4' | H4' | 37.1° | 23.8° |
| O4' | C4' | C5' | H4' | 120.3° | 122.3° |
| O4' | C4' | C5' | O5' | 59.0° | 69.6° |
| C4' | O4' | C1' | H1' | 127.8° | 78.4° |
| O4' | C4' | C3' | H3' | 86.0° | 94.7° |
| O4' | C4' | C5' | H5' | 61.0° | 170.4° |
| O4' | C4' | C5' | H5'A | 179.0° | 50.4° |
| C4' | C5' | O5' | H5' | 120.0° | 120.0° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.0° |
| C5' | C4' | C3' | H3' | 38.2° | 24.1° |
| C4' | C5' | H5' | H5'A | 118.5° | 120.0° |
| C5' | O5' | P | OP3 | 72.2° | 175.0° |
| O5' | C5' | C4' | H4' | 179.3° | 52.7° |
| O5' | C5' | H5' | H5'A | 118.6° | 120.0° |
| OP3 | P | OP2 | HOP2 | 110.2° | 60.0° |
| H1' | C1' | C2' | H2' | 86.6° | 146.3° |
| H2' | C2' | C3' | H3' | 41.2° | 0.0° |
| H3' | C3' | O3' | HO3' | 55.6° | 61.3° |
| H3' | C3' | C4' | H4' | 153.3° | 146.4° |
| H4' | C4' | C5' | H5' | 59.3° | 67.3° |
| H4' | C4' | C5' | H5'A | 60.7° | 172.7° |
