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GDQ

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6O6sing1.43Å1.43Å
C6C5sing1.53Å1.54Å
C5C7sing1.51Å1.51Å
C5C4sing1.51Å1.54Å
C7C1sing1.51Å1.51Å
N2C1sing1.46Å1.47Å
N2C2sing1.48Å1.49Å
C1C2sing1.52Å1.49Å
O4C4sing1.43Å1.44Å
C4C3sing1.51Å1.51Å
C2C3sing1.52Å1.52Å
C3O3sing1.43Å1.44Å
C7H1sing1.09Å1.10Å
C7H2sing1.09Å1.10Å
C4H3sing1.09Å1.10Å
C2H4sing1.09Å1.10Å
C1H5sing1.09Å1.10Å
O4H6sing0.97Å0.95Å
C5H7sing1.09Å1.10Å
C6H8sing1.09Å1.10Å
C6H9sing1.09Å1.10Å
O6H10sing0.97Å0.95Å
C3H11sing1.09Å1.10Å
O3H12sing0.97Å0.95Å
N2H13sing1.01Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O6C6C5113.6°109.5°
O6C6H8108.4°109.5°
O6C6H9108.5°109.5°
C6O6H10109.5°114.0°
C6C5C7108.4°108.8°
C6C5C4113.9°108.8°
C6C5H7108.1°108.6°
C5C6H8108.4°109.4°
C5C6H9108.4°109.4°
C7C5C4109.7°112.9°
C5C7C1114.2°112.7°
C5C7H1108.3°108.8°
C5C7H2108.3°108.8°
C7C5H7108.4°108.8°
C5C4O4111.3°108.7°
C5C4C3111.3°112.9°
C5C4H3108.4°108.9°
C4C5H7108.2°108.8°
C7C1N2117.9°120.5°
C7C1C2118.5°120.1°
C1C7H1108.3°108.8°
C1C7H2108.3°108.9°
C7C1H5115.9°114.6°
C1N2C260.6°62.3°
N2C1C260.2°59.3°
N2C1H5116.7°115.4°
C1N2H13119.9°111.0°
N2C2C159.2°58.4°
N2C2C3117.8°116.2°
N2C2H4115.8°117.3°
C2N2H13119.9°111.0°
C1C2C3121.5°120.7°
C1C2H4115.7°116.9°
C2C1H5116.3°115.9°
O4C4C3107.5°108.8°
O4C4H3109.6°108.8°
C4O4H6109.5°114.0°
C4C3C2113.5°112.2°
C4C3O3107.4°108.9°
C3C4H3108.7°108.7°
C4C3H11108.7°108.9°
C2C3O3109.0°108.9°
C3C2H4115.3°115.5°
C2C3H11108.6°108.9°
O3C3H11109.6°108.9°
C3O3H12109.5°114.0°
H1C7H2109.5°108.8°
H8C6H9109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O6C6C5H8120.6°120.0°
O6C6C5H9120.6°120.1°
O6C6C5C753.2°175.0°
O6C6C5C469.2°61.6°
O6C6C5H7170.5°56.7°
O6C6H8H9118.2°120.1°
C6C5C7C4124.9°120.9°
C6C5C7H7117.2°118.2°
C6C5C4H7120.2°118.2°
C6C5C7C1176.4°167.8°
C6C5C4O453.6°55.4°
C6C5C4C3173.5°176.2°
C6C5C7H162.9°47.0°
C6C5C7H255.7°71.4°
C6C5C4H367.0°62.9°
C5C6H8H9118.1°119.9°
C5C6O6H10180.0°180.0°
C7C5C4H7118.1°120.9°
C5C7C1H1120.7°120.8°
C5C7C1H2120.7°120.8°
C5C7C1N248.4°50.5°
C5C7C1C221.0°19.4°
C7C5C4O4175.3°176.3°
C7C5C4C364.8°62.9°
C5C7H1H2117.9°118.4°
C7C5C4H354.7°57.9°
C5C7C1H5166.3°164.7°
C7C5C6H8173.8°65.0°
C7C5C6H967.4°54.9°
C4C5C7C151.5°46.9°
C5C4O4C3122.2°123.3°
C5C4O4H3119.9°118.4°
C5C4C3H3119.3°120.9°
C5C4C3C245.1°46.5°
C5C4C3O3165.6°167.2°
C4C5C7H1172.2°73.9°
C4C5C7H269.2°167.7°
C5C4O4H6180.0°176.7°
C4C5C6H851.4°58.4°
C4C5C6H9170.2°178.3°
C5C4C3H1175.8°74.2°
C7C1N2C2108.6°109.1°
C7C1N2H5145.0°144.6°
C7C1C2H5145.3°144.8°
C7C1C2C31.8°6.1°
C1C7H1H2117.8°118.5°
C7C1C2H4146.4°143.3°
C1C7C5H766.5°74.0°
C7C1N2H131.1°5.7°
C1N2C2H13109.6°103.4°
N2C1C2H5107.1°105.4°
C1N2C2C3111.9°111.4°
N2C1C7H172.3°171.3°
N2C1C7H2169.1°70.3°
C1N2C2H4105.8°106.2°
N2C2C3C483.4°86.3°
N2C2C3H4142.5°143.0°
N2C2C3O3156.9°153.0°
N2C2C3H1137.6°34.4°
C1C2C3C414.3°19.1°
C1C2C3H4148.3°149.8°
C1C2C3O3133.9°139.8°
C2C1C7H1141.7°101.4°
C2C1C7H299.7°140.2°
C1C2C3H11106.7°101.5°
O4C4C3H3118.5°118.3°
O4C4C3C2167.2°167.3°
O4C4C3O372.2°72.0°
O4C4C5H766.6°62.8°
O4C4C3H1146.3°46.6°
C4C3C2O3119.7°120.7°
C4C3C2H11121.0°120.7°
C4C3O3H11117.9°118.6°
C4C3C2H4134.1°130.7°
C3C4O4H657.8°60.0°
C3C4C5H753.3°58.0°
C4C3O3H12180.0°60.0°
C2C3O3H11118.7°118.6°
C2C3C4H374.2°74.4°
C3C2C1H5147.1°150.9°
C2C3O3H1256.6°177.3°
C3C2N2H132.2°8.0°
O3C3C4H346.3°46.3°
O3C3C2H414.4°10.0°
H1C7C1H572.9°43.8°
H1C7C5H754.2°165.2°
H2C7C1H545.7°74.6°
H2C7C5H7172.9°46.8°
H3C4O4H660.1°58.3°
H3C4C5H7172.8°178.8°
H3C4C3H11164.8°164.9°
H4C2C1H51.1°1.5°
H4C2C3H11105.0°108.6°
H4C2N2H13144.6°150.3°
H5C1N2H13143.9°150.2°
H7C5C6H868.9°176.8°
H7C5C6H949.9°63.3°
H8C6O6H1059.4°60.1°
H9C6O6H1059.4°59.9°
H11C3O3H1262.1°58.6°

246704

PDB entries from 2025-12-24

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