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GDM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C1doub1.22Å1.21Å
O2C6sing1.43Å1.48Å
O2C23sing1.43Å1.47Å
O3C7sing1.45Å1.39Å
O3C24sing1.35Å1.37Å
O4C24doub1.21Å1.21Å
O5C11sing1.43Å1.45Å
O5HO5sing0.97Å0.95Å
O6C12sing1.43Å1.44Å
O6C27sing1.43Å1.46Å
O7C17sing1.35Å1.44Å
O7C29sing1.43Å1.44Å
O8C18doub1.22Å1.23Å
O9C21doub1.22Å1.23Å
N1C1sing1.33Å1.41Å
N1C20sing1.38Å1.39Å
N1HN1sing0.98Å1.02Å
N2C24sing1.35Å1.34Å
N2HN21sing0.97Å1.02Å
N2HN22sing0.97Å1.02Å
C1C2sing1.46Å1.50Å
C2C3doub1.35Å1.36Å
C2C22sing1.50Å1.50Å
C3C4sing1.45Å1.46Å
C3H3sing1.09Å1.10Å
C4C5doub1.34Å1.35Å
C4H4sing1.08Å1.10Å
C5C6sing1.50Å1.49Å
C5H5sing1.08Å1.10Å
C6C7sing1.53Å1.59Å
C6H6sing1.09Å1.11Å
C7C8sing1.51Å1.63Å
C7H7sing1.09Å1.12Å
C8C9doub1.31Å1.32Å
C8C25sing1.51Å1.53Å
C9C10sing1.50Å1.50Å
C9H9sing1.09Å1.10Å
C10C11sing1.54Å1.54Å
C10C26sing1.53Å1.54Å
C10H10sing1.09Å1.11Å
C11C12sing1.53Å1.53Å
C11H11sing1.09Å1.12Å
C12C13sing1.53Å1.53Å
C12H12sing1.09Å1.11Å
C13C14sing1.53Å1.55Å
C13H131sing1.09Å1.11Å
C13H132sing1.09Å1.12Å
C14C15sing1.53Å1.57Å
C14C28sing1.53Å1.50Å
C14H14sing1.09Å1.11Å
C15C16sing1.51Å1.50Å
C15H151sing1.09Å1.11Å
C15H152sing1.09Å1.11Å
C16C17doub1.35Å1.34Å
C16C21sing1.47Å1.49Å
C17C18sing1.49Å1.47Å
C18C19sing1.46Å1.47Å
C19C20doub1.35Å1.33Å
C19H19sing1.08Å1.10Å
C20C21sing1.49Å1.50Å
C22H221sing1.09Å1.12Å
C22H222sing1.09Å1.11Å
C22H223sing1.09Å1.11Å
C23H231sing1.09Å1.12Å
C23H232sing1.09Å1.11Å
C23H233sing1.09Å1.11Å
C25H251sing1.09Å1.11Å
C25H252sing1.09Å1.12Å
C25H253sing1.09Å1.11Å
C26H261sing1.09Å1.11Å
C26H262sing1.09Å1.12Å
C26H263sing1.09Å1.12Å
C27H271sing1.09Å1.11Å
C27H272sing1.09Å1.12Å
C27H273sing1.09Å1.12Å
C28H281sing1.09Å1.11Å
C28H282sing1.09Å1.12Å
C28H283sing1.09Å1.12Å
C29H291sing1.09Å1.12Å
C29H292sing1.09Å1.11Å
C29H293sing1.09Å1.11Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1N1119.3°118.4°
O1C1C2121.9°116.4°
C6O2C23115.4°106.8°
O2C6C5112.3°108.7°
O2C6C7107.1°108.9°
O2C6H6110.3°108.9°
O2C23H231115.4°109.5°
O2C23H232110.0°109.5°
O2C23H233110.1°109.5°
C7O3C24112.4°120.1°
O3C7C6107.7°109.5°
O3C7C8109.2°109.4°
O3C7H7112.2°109.4°
O3C24O4125.6°120.0°
O3C24N2109.1°120.0°
O4C24N2125.3°120.0°
C11O5HO5107.0°106.8°
O5C11C10107.0°109.2°
O5C11C12110.8°109.5°
O5C11H11111.3°109.6°
C12O6C27113.2°106.8°
O6C12C11109.4°109.4°
O6C12C13106.4°109.8°
O6C12H12113.0°109.6°
O6C27H271113.2°109.5°
O6C27H272110.9°109.5°
O6C27H273110.8°109.5°
C17O7C29125.1°106.8°
O7C17C16121.6°120.4°
O7C17C18115.6°119.7°
O7C29H291125.0°109.5°
O7C29H292106.7°109.4°
O7C29H293106.7°109.4°
O8C18C17119.9°119.8°
O8C18C19120.7°120.1°
O9C21C16120.1°119.4°
O9C21C20119.1°120.6°
C1N1C20133.7°118.7°
C1N1HN1114.0°121.5°
N1C1C2118.6°125.3°
C20N1HN1112.2°119.8°
N1C20C19127.8°121.3°
N1C20C21112.4°119.0°
C24N2HN21125.3°120.0°
C24N2HN22109.2°120.1°
HN21N2HN22125.5°119.9°
C1C2C3119.5°117.2°
C1C2C22115.8°121.2°
C3C2C22124.7°121.6°
C2C3C4125.5°123.2°
C2C3H3113.3°116.9°
C2C22H221115.7°109.5°
C2C22H222109.9°109.4°
C2C22H223109.9°109.5°
C4C3H3121.2°119.9°
C3C4C5125.9°121.1°
C3C4H4121.5°120.9°
C5C4H4112.6°118.0°
C4C5C6127.9°122.2°
C4C5H5110.4°118.6°
C6C5H5121.8°119.2°
C5C6C7112.7°110.4°
C5C6H6104.5°110.5°
C7C6H6109.9°109.3°
C6C7C8113.2°110.1°
C6C7H7108.1°109.3°
C8C7H7106.6°109.2°
C7C8C9120.4°119.2°
C7C8C25115.9°119.4°
C9C8C25123.7°121.4°
C8C9C10128.7°123.6°
C8C9H9108.3°118.0°
C8C25H251115.9°109.5°
C8C25H252109.8°109.5°
C8C25H253109.9°109.5°
C10C9H9123.0°118.4°
C9C10C11113.5°109.0°
C9C10C26106.5°109.7°
C9C10H10109.0°111.0°
C11C10C26110.0°108.6°
C11C10H10105.4°108.9°
C10C11C12112.4°109.4°
C10C11H11109.6°109.4°
C26C10H10112.6°109.7°
C10C26H261106.5°109.4°
C10C26H262113.4°109.4°
C10C26H263113.4°109.5°
C12C11H11105.8°109.7°
C11C12C13113.6°109.2°
C11C12H12105.7°109.1°
C13C12H12108.8°109.7°
C12C13C14115.9°110.6°
C12C13H131109.9°109.2°
C12C13H132109.8°109.4°
C14C13H131109.9°109.3°
C14C13H132109.9°109.3°
C13C14C15113.1°109.9°
C13C14C28109.9°109.4°
C13C14H14107.4°110.0°
H131C13H132100.3°109.0°
C15C14C28111.8°108.9°
C15C14H14105.4°109.3°
C14C15C16112.5°109.3°
C14C15H151111.1°109.3°
C14C15H152111.1°109.3°
C28C14H14108.9°109.3°
C14C28H281110.0°109.5°
C14C28H282112.0°109.4°
C14C28H283112.0°109.4°
C16C15H151111.1°109.7°
C16C15H152111.1°110.0°
C15C16C17126.7°120.7°
C15C16C21116.3°119.4°
H151C15H15299.3°109.3°
C17C16C21116.9°119.9°
C16C17C18122.8°119.9°
C16C21C20120.8°120.0°
C17C18C19119.4°120.1°
C18C19C20120.2°120.2°
C18C19H19124.7°120.0°
C20C19H19115.1°119.8°
C19C20C21119.8°119.7°
H221C22H222110.0°109.5°
H221C22H223109.9°109.5°
H222C22H223100.3°109.4°
H231C23H232110.0°109.5°
H231C23H233110.0°109.5°
H232C23H233100.2°109.5°
H251C25H252109.9°109.4°
H251C25H253109.9°109.5°
H252C25H253100.3°109.5°
H261C26H262113.3°109.4°
H261C26H263113.3°109.5°
H262C26H26397.0°109.5°
H271C27H272110.8°109.5°
H271C27H273110.8°109.5°
H272C27H27399.4°109.4°
H281C28H282112.0°109.5°
H281C28H283112.1°109.5°
H282C28H28398.3°109.5°
H291C29H292106.7°109.5°
H291C29H293106.7°109.5°
H292C29H293103.0°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1N1C2176.0°179.6°
O1C1N1C20174.9°22.7°
O1C1N1HN15.0°156.8°
O1C1C2C3121.4°2.4°
O1C1C2C2257.3°177.8°
O2C6C7O355.4°35.1°
O2C6C5C4111.1°124.2°
O2C6C5C7121.1°119.4°
O2C6C5H6119.6°119.5°
O2C6C5H568.9°55.7°
O2C6C7H6119.8°118.9°
O2C6C7C8176.1°85.2°
O2C6C7H766.0°154.9°
C6O2C23H231180.0°180.0°
C6O2C23H23254.8°60.0°
C6O2C23H23354.8°60.0°
C23O2C6C55.4°90.0°
C23O2C6C7118.9°149.7°
C23O2C6H6121.5°30.5°
O2C23H231H232125.2°120.0°
O2C23H231H233125.3°120.0°
O2C23H232H233115.9°120.0°
C7O3C24O416.5°0.1°
C7O3C24N2163.5°179.9°
O3C7C6C5179.4°84.2°
O3C7C6C8120.8°120.3°
O3C7C6H7121.4°119.8°
O3C7C6H664.5°154.0°
O3C7C8H7121.3°119.7°
O3C7C8C9117.4°131.6°
O3C7C8C2560.6°48.2°
O3C24O4N2180.0°179.9°
O3C24N2HN210.0°180.0°
O3C24N2HN22180.0°0.0°
C24O3C7C6148.8°150.0°
C24O3C7C887.9°89.3°
C24O3C7H730.0°30.3°
O4C24N2HN21180.0°0.1°
O4C24N2HN220.0°179.9°
O5C11C12O663.7°170.9°
O5C11C10C9170.6°143.2°
O5C11C10C12121.8°119.8°
O5C11C10H11120.8°120.0°
O5C11C10C2651.4°23.8°
O5C11C10H1070.2°95.6°
O5C11C12H11120.8°120.3°
O5C11C12C1355.0°68.9°
O5C11C12H12174.3°51.1°
HO5O5C11C10180.0°60.0°
HO5O5C11C1257.2°179.8°
HO5O5C11H1160.2°59.8°
O6C12C11C10176.7°51.3°
O6C12C11C13118.8°120.2°
O6C12C11H12122.0°119.8°
O6C12C11H1157.0°68.7°
O6C12C13H12122.1°120.5°
O6C12C13C1461.4°47.4°
O6C12C13H13163.9°73.0°
O6C12C13H132173.3°167.8°
C12O6C27H271180.0°174.5°
C12O6C27H27254.7°65.5°
C12O6C27H27354.7°54.5°
C27O6C12C1170.6°120.9°
C27O6C12C13166.3°119.2°
C27O6C12H1246.9°1.4°
O6C27H271H272125.3°120.1°
O6C27H271H273125.3°120.0°
O6C27H272H273116.7°120.0°
O7C17C18O80.0°2.2°
O7C17C16C150.7°0.2°
O7C17C16C18180.0°179.8°
O7C17C16C21179.6°179.5°
O7C17C18C19179.7°177.7°
C17O7C29H291180.0°177.1°
C17O7C29H29254.8°62.9°
C17O7C29H29354.8°57.1°
C29O7C17C1638.7°113.0°
C29O7C17C18141.3°67.1°
O7C29H291H292125.3°120.0°
O7C29H291H293125.2°119.9°
O7C29H292H293112.2°119.9°
O8C18C17C16179.9°177.6°
O8C18C17C19179.7°179.9°
O8C18C19C20179.7°179.1°
O8C18C19H190.4°0.8°
O9C21C20N10.1°5.8°
O9C21C16C151.0°5.4°
O9C21C16C17179.3°173.8°
O9C21C16C20180.0°178.3°
O9C21C20C19179.7°172.4°
C1N1C20HN1180.0°179.5°
N1C1C2C362.7°177.3°
N1C1C2C22118.6°2.6°
C1N1C20C19119.9°149.6°
C1N1C20C2160.4°32.2°
C20N1C1C29.1°156.9°
N1C20C21C16179.9°175.9°
N1C20C19C18179.4°178.8°
N1C20C19C21179.7°178.2°
N1C20C19H190.7°1.4°
HN1N1C1C2170.9°23.6°
HN1N1C20C1960.1°29.9°
HN1N1C20C21119.6°148.3°
C24N2HN21HN22179.9°180.0°
C1C2C3C22178.5°179.9°
C1C2C3C4179.9°179.8°
C1C2C3H30.1°0.0°
C1C2C22H221180.0°180.0°
C1C2C22H22254.7°60.0°
C1C2C22H22354.8°60.0°
C2C3C4H3180.0°179.8°
C2C3C4C5159.6°175.0°
C2C3C4H420.4°5.3°
C3C2C22H2211.4°0.2°
C3C2C22H222126.7°119.8°
C3C2C22H223123.8°120.2°
C22C2C3C41.4°0.3°
C22C2C3H3178.6°179.9°
C2C22H221H222125.3°120.0°
C2C22H221H223125.2°120.0°
C2C22H222H223115.7°120.0°
C3C4C5H4180.0°179.8°
C3C4C5C60.0°0.1°
C3C4C5H5180.0°179.8°
H3C3C4C520.4°5.2°
H3C3C4H4159.6°174.6°
C4C5C6H5180.0°179.9°
C4C5C6C7127.8°116.3°
C4C5C6H68.5°4.7°
H4C4C5C6180.0°179.9°
H4C4C5H50.0°0.0°
C5C6C7H6116.1°121.8°
C5C6C7C859.8°155.5°
C5C6C7H758.0°35.6°
H5C5C6C752.2°63.8°
H5C5C6H6171.5°175.2°
C6C7C8H7118.7°119.9°
C6C7C8C9122.7°108.1°
C6C7C8C2559.4°72.1°
H6C6C7C856.3°33.7°
H6C6C7H7174.1°86.2°
C7C8C9C25177.8°179.8°
C7C8C9C10177.6°179.8°
C7C8C9H92.4°0.0°
C7C8C25H251180.0°180.0°
C7C8C25H25254.7°60.0°
C7C8C25H25354.7°60.0°
H7C7C8C93.9°11.9°
H7C7C8C25178.1°167.9°
C8C9C10H9180.0°179.9°
C8C9C10C11134.6°154.6°
C8C9C10C26104.2°86.6°
C8C9C10H1017.4°34.7°
C9C8C25H2512.1°0.2°
C9C8C25H252123.2°119.7°
C9C8C25H253127.4°120.2°
C25C8C9C100.2°0.1°
C25C8C9H9179.8°179.8°
C8C25H251H252125.2°120.0°
C8C25H251H253125.3°120.0°
C8C25H252H253115.6°120.0°
C9C10C11C26119.2°119.4°
C9C10C11H10119.2°121.2°
C9C10C26H10119.4°122.1°
C9C10C11C1267.6°97.0°
C9C10C11H1149.7°23.2°
C9C10C26H261180.0°60.1°
C9C10C26H26254.7°180.0°
C9C10C26H26354.7°60.0°
H9C9C10C1145.4°25.5°
H9C9C10C2675.8°93.2°
H9C9C10H10162.6°145.5°
C11C10C26H10117.2°118.9°
C10C11C12H11119.6°120.0°
C10C11C12C1364.6°171.5°
C10C11C12H1254.6°68.5°
C11C10C26H26156.6°179.1°
C11C10C26H26268.7°61.0°
C11C10C26H263178.1°59.0°
C26C10C11C12173.2°143.6°
C26C10C11H1169.5°96.2°
C10C26H261H262125.3°119.9°
C10C26H261H263125.3°120.0°
C10C26H262H263119.3°120.0°
H10C10C11C1251.6°24.2°
H10C10C11H11169.0°144.5°
H10C10C26H26160.6°62.0°
H10C10C26H262174.1°57.9°
H10C10C26H26364.7°177.9°
C11C12C13H12117.4°119.6°
C11C12C13C14178.1°167.3°
C11C12C13H13156.6°47.0°
C11C12C13H13252.8°72.3°
H11C11C12C13175.8°51.5°
H11C11C12H1265.0°171.4°
C12C13C14H131125.3°120.2°
C12C13C14H132125.2°120.5°
C12C13H131H132115.6°119.5°
C12C13C14C15170.0°165.9°
C12C13C14C2844.2°74.6°
C12C13C14H1474.1°45.4°
H12C12C13C1460.6°73.1°
H12C12C13H131174.1°166.5°
H12C12C13H13264.7°47.3°
C14C13H131H132115.7°119.4°
C13C14C15C28124.8°119.8°
C13C14C15H14117.1°120.9°
C13C14C28H14117.4°120.5°
C13C14C15C1661.9°127.8°
C13C14C15H151172.9°7.8°
C13C14C15H15263.3°111.8°
C13C14C28H281180.0°180.0°
C13C14C28H28254.7°60.0°
C13C14C28H28354.7°60.0°
H131C13C14C1564.8°45.6°
H131C13C14C28169.4°165.1°
H131C13C14H1451.2°74.8°
H132C13C14C1544.7°73.6°
H132C13C14C2881.1°45.9°
H132C13C14H14160.6°165.9°
C15C14C28H14116.1°119.4°
C14C15C16H151125.2°119.9°
C14C15C16H152125.2°119.9°
C14C15H151H152117.0°119.6°
C14C15C16C1786.0°128.6°
C14C15C16C2193.7°52.2°
C15C14C28H28153.4°59.9°
C15C14C28H28271.9°60.2°
C15C14C28H283178.8°179.9°
C28C14C15C1662.9°112.4°
C28C14C15H15162.4°127.6°
C28C14C15H152171.9°8.0°
C14C28H281H282125.3°120.0°
C14C28H281H283125.3°119.9°
C14C28H282H283117.9°119.9°
H14C14C15C16179.0°7.0°
H14C14C15H15155.8°113.1°
H14C14C15H15253.7°127.3°
H14C14C28H28162.6°59.5°
H14C14C28H282172.1°179.5°
H14C14C28H28362.7°60.5°
C16C15H151H152117.0°120.6°
C15C16C17C21179.7°179.2°
C15C16C17C18179.3°179.6°
C15C16C21C20179.0°176.3°
H151C15C16C17148.8°111.6°
H151C15C16C2131.5°67.7°
H152C15C16C1739.3°8.7°
H152C15C16C21141.0°172.1°
C16C17C18C190.3°2.5°
C17C16C21C200.7°4.5°
C21C16C17C180.4°0.4°
C16C21C20C190.3°5.9°
C17C18C19C200.7°1.0°
C17C18C19H19179.3°179.2°
C18C19C20H19180.0°179.8°
C18C19C20C210.4°3.1°
H19C19C20C21179.6°176.8°
H221C22H222H223115.7°120.0°
H231C23H232H233115.9°120.0°
H251C25H252H253115.7°120.0°
H261C26H262H263119.2°120.1°
H271C27H272H273116.7°120.0°
H281C28H282H283118.0°120.1°
H291C29H292H293112.1°120.1°

222624

PDB entries from 2024-07-17

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