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GD9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3C15sing1.43Å1.42Å
O3C16sing1.43Å1.42Å
C4N2doub1.32Å1.36ÅAromatic
C4N3sing1.39Å1.37Å
C4C1sing1.41Å1.40ÅAromatic
C5C6doub1.32Å1.33ÅAromatic
C5C7sing1.51Å1.51Å
C5S1sing1.75Å1.68ÅAromatic
C6C2sing1.45Å1.45ÅAromatic
N1C2sing1.35Å1.33ÅAromatic
N1C3doub1.32Å1.35ÅAromatic
C7N4sing1.47Å1.44Å
C8C3sing1.48Å1.39ÅAromatic
C8C18doub1.39Å1.39ÅAromatic
C8C22sing1.41Å1.37ÅAromatic
N2C3sing1.33Å1.36ÅAromatic
C9C10sing1.53Å1.53Å
C9N4sing1.47Å1.46Å
C10N5sing1.47Å1.47Å
C11C12sing1.53Å1.51Å
C11N5sing1.47Å1.44Å
C12N4sing1.47Å1.45Å
N3C14sing1.47Å1.46Å
N3C17sing1.47Å1.46Å
C13S2sing1.81Å1.82Å
C14C15sing1.53Å1.52Å
O2S2doub1.42Å1.47Å
S2O1doub1.42Å1.47Å
S2N5sing1.66Å1.72Å
S1C1sing1.76Å1.70ÅAromatic
C2C1doub1.40Å1.37ÅAromatic
C18C19sing1.39Å1.39ÅAromatic
C19C20doub1.38Å1.38ÅAromatic
C20C21sing1.39Å1.38ÅAromatic
C21N6sing1.37Å1.38ÅAromatic
C21C22doub1.41Å1.34ÅAromatic
N6N7sing1.40Å1.43ÅAromatic
C22C23sing1.41Å1.43ÅAromatic
C23N7doub1.30Å1.35ÅAromatic
C16C17sing1.53Å1.53Å
C6H6sing1.08Å1.08Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C13H13sing1.09Å1.10Å
C13H13Asing1.09Å1.10Å
C13H13Bsing1.09Å1.10Å
C14H14sing1.09Å1.10Å
C14H14Asing1.09Å1.10Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C18H18sing1.08Å1.08Å
C19H19sing1.08Å1.08Å
C20H20sing1.08Å1.08Å
N6HN6sing0.97Å1.00Å
C23H23sing1.08Å1.08Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C15O3C16110.6°113.8°
O3C15C14112.3°109.3°
O3C15H15108.5°109.5°
O3C15H15A107.9°109.5°
O3C16C17107.8°109.3°
O3C16H16110.0°109.5°
O3C16H16A110.4°109.5°
N2C4N3118.9°120.5°
N2C4C1116.4°119.0°
C4N2C3122.1°120.8°
N3C4C1124.7°120.5°
C4N3C14117.1°111.0°
C4N3C17123.6°111.0°
C4C1S1128.3°131.4°
C4C1C2119.7°118.8°
C6C5C7121.4°124.3°
C6C5S1116.1°111.3°
C5C6C2109.0°114.8°
C5C6H6125.5°122.6°
C7C5S1122.5°124.4°
C5C7N4111.5°109.5°
C5C7H7108.8°109.4°
C5C7H7A108.3°109.5°
C5S1C190.7°92.1°
C6C2N1125.6°129.9°
C6C2C1112.2°112.0°
C2C6H6125.5°122.6°
C2N1C3118.4°121.0°
N1C2C1122.2°118.1°
N1C3C8116.2°118.9°
N1C3N2121.1°122.2°
C7N4C9113.3°111.0°
C7N4C12111.1°111.0°
N4C7H7108.8°109.5°
N4C7H7A108.4°109.5°
C3C8C18121.3°120.3°
C3C8C22120.9°120.3°
C8C3N2122.7°118.9°
C18C8C22117.8°119.5°
C8C18C19119.3°120.4°
C8C18H18120.3°119.8°
C8C22C21124.0°119.5°
C8C22C23129.4°133.6°
C10C9N4108.1°109.3°
C9C10N5108.9°108.5°
C10C9H9109.9°109.5°
C10C9H9A110.2°109.5°
C9C10H10109.7°109.6°
C9C10H10A109.8°109.7°
C9N4C12111.9°111.3°
N4C9H9109.9°109.5°
N4C9H9A110.2°109.5°
C10N5C11111.5°118.2°
C10N5S2112.7°120.9°
N5C10H10109.7°109.6°
N5C10H10A109.8°109.6°
C12C11N5104.7°108.6°
C11C12N4101.8°109.3°
C12C11H11111.1°109.6°
C12C11H11A112.1°109.7°
C11C12H12112.1°109.5°
C11C12H12A113.7°109.5°
C11N5S2106.8°120.9°
N5C11H11111.1°109.6°
N5C11H11A112.1°109.6°
N4C12H12112.1°109.5°
N4C12H12A113.7°109.5°
C14N3C17116.1°110.8°
N3C14C15109.4°109.3°
N3C14H14109.5°109.5°
N3C14H14A109.5°109.5°
N3C17C16105.6°109.3°
N3C17H17110.8°109.5°
N3C17H17A111.6°109.5°
C13S2O2111.7°110.5°
C13S2O1109.4°110.5°
C13S2N5108.2°104.5°
S2C13H13109.5°109.4°
S2C13H13A109.5°109.5°
S2C13H13B109.5°109.5°
C15C14H14109.5°109.5°
C15C14H14A109.5°109.5°
C14C15H15108.6°109.5°
C14C15H15A107.9°109.6°
O2S2O1110.2°121.0°
O2S2N5107.1°104.3°
O1S2N5110.2°104.3°
S1C1C2112.0°109.8°
C18C19C20120.5°120.8°
C19C18H18120.4°119.8°
C18C19H19119.7°119.6°
C19C20C21120.0°120.1°
C20C19H19119.8°119.6°
C19C20H20120.0°119.9°
C20C21N6129.6°133.7°
C20C21C22118.4°119.8°
C21C20H20120.0°119.9°
N6C21C22112.1°106.6°
C21N6N7104.3°108.1°
C21N6HN6127.9°126.0°
C21C22C23106.6°106.9°
N6N7C23109.6°109.7°
N7N6HN6127.8°125.9°
C22C23N7107.4°108.7°
C22C23H23126.3°125.6°
N7C23H23126.3°125.7°
C17C16H16110.0°109.5°
C17C16H16A110.4°109.5°
C16C17H17110.8°109.6°
C16C17H17A111.6°109.5°
H7C7H7A111.1°109.4°
H9C9H9A108.5°109.5°
H10C10H10A109.1°109.8°
H11C11H11A105.9°109.8°
H12C12H12A103.7°109.6°
H13C13H13A109.5°109.5°
H13C13H13B109.4°109.5°
H13AC13H13B109.5°109.5°
H14C14H14A109.4°109.5°
H15C15H15A111.7°109.6°
H16C16H16A108.2°109.6°
H17C17H17A106.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3C15C14N347.2°56.8°
O3C15C14H15120.0°119.9°
O3C15C14H15A118.8°120.0°
C15O3C16C1767.4°58.6°
O3C15C14H1472.8°63.1°
O3C15C14H14A167.3°176.8°
O3C15H15H15A118.8°120.1°
C15O3C16H16172.6°178.6°
C15O3C16H16A53.2°61.3°
O3C16C17N363.4°56.9°
C16O3C15C1459.2°58.6°
O3C16C17H16120.0°119.9°
O3C16C17H16A120.6°119.9°
C16O3C15H1560.8°61.3°
C16O3C15H15A178.0°178.6°
O3C16H16H16A120.7°120.1°
O3C16C17H17176.6°176.8°
O3C16C17H17A58.0°63.1°
N2C4N3C1178.0°179.7°
C4N2C3N10.8°0.0°
C4N2C3C8179.0°179.5°
N2C4N3C1425.6°0.0°
N2C4N3C17133.4°123.6°
N2C4C1S1179.5°179.9°
N2C4C1C20.2°0.0°
N3C4N2C3178.4°180.0°
C4N3C14C17160.6°123.8°
C4N3C14C15150.7°177.6°
N3C4C1S12.5°0.3°
N3C4C1C2178.3°179.8°
C4N3C17C16144.3°177.6°
C4N3C14H1489.3°62.5°
C4N3C14H14A30.7°57.6°
C4N3C17H1724.2°57.6°
C4N3C17H17A94.3°62.4°
C4C1S1C5180.0°180.0°
C4C1C2C6179.9°179.9°
C4C1C2N10.8°0.5°
C1C4N2C30.2°0.3°
C1C4N3C14152.3°179.7°
C1C4N3C1748.6°56.6°
C4C1S1C2179.3°179.9°
C6C5C7S1179.5°179.7°
C5C6C2H6180.0°180.0°
C5C6C2N1179.4°179.4°
C6C5C7N477.1°90.0°
C6C5S1C10.5°0.2°
C5C6C2C10.3°0.2°
C6C5C7H7162.9°150.0°
C6C5C7H7A42.1°30.1°
C7C5C6C2179.3°180.0°
C5C7N4H7120.0°120.0°
C5C7N4H7A119.1°120.1°
C5C7N4C9159.7°170.0°
C5C7N4C1273.3°65.7°
C7C5S1C1179.0°179.9°
C7C5C6H60.7°0.0°
C5C7H7H7A119.2°120.0°
S1C5C6C20.2°0.2°
S1C5C7N4103.4°89.7°
C5S1C1C20.7°0.1°
S1C5C6H6179.8°179.8°
S1C5C7H716.6°30.3°
S1C5C7H7A137.5°150.2°
C6C2N1C1179.0°179.2°
C6C2N1C3179.7°180.0°
C6C2C1S10.7°0.0°
C2N1C3C8179.7°180.0°
C2N1C3N21.3°0.6°
N1C2C1S1179.8°179.4°
N1C2C6H60.7°0.5°
N1C3C8N2178.3°179.5°
N1C3C8C1832.9°180.0°
N1C3C8C22144.7°0.3°
C3N1C2C11.4°0.8°
C7N4C9C10173.1°172.7°
C7N4C9C12126.5°124.1°
C7N4C12C11161.7°172.8°
N4C7H7H7A119.2°120.0°
C7N4C9H953.1°52.8°
C7N4C9H9A66.4°67.3°
C7N4C12H1278.3°67.3°
C7N4C12H12A38.9°52.8°
C3C8C18C22177.7°179.7°
C3C8C18C19179.1°180.0°
C3C8C22C21178.6°179.8°
C3C8C22C232.1°0.0°
C3C8C18H180.9°0.1°
C18C8C3N2148.8°0.5°
C8C18C19H18180.0°179.9°
C8C18C19C201.1°0.0°
C18C8C22C210.9°0.5°
C18C8C22C23179.7°179.7°
C8C18C19H19178.9°180.0°
C22C8C3N233.6°179.2°
C22C8C18C191.4°0.3°
C8C22C21C200.0°0.6°
C8C22C21N6179.6°179.7°
C8C22C21C23179.5°179.8°
C8C22C23N7179.8°179.2°
C22C8C18H18178.6°179.8°
C8C22C23H230.2°0.0°
C10C9N4H9120.0°119.9°
C10C9N4H9A120.5°120.0°
C9C10N5H10120.0°119.7°
C9C10N5H10A120.2°119.8°
C9C10N5C1157.1°51.2°
C10C9N4C1260.4°63.2°
C9C10N5S2177.1°128.8°
C10C9H9H9A120.5°120.1°
C9C10H10H10A120.3°120.5°
N4C9C10N549.6°53.9°
C9N4C12C1170.5°63.1°
C9N4C7H780.3°70.0°
C9N4C7H7A40.6°50.0°
N4C9H9H9A120.6°120.1°
N4C9C10H10169.6°173.5°
N4C9C10H10A70.6°65.8°
C9N4C12H1249.5°56.8°
C9N4C12H12A166.7°176.9°
C10N5C11C1268.7°51.2°
C10N5C11S2123.5°179.9°
C10N5S2C1365.4°90.0°
C10N5S2O255.1°26.1°
C10N5S2O1175.1°153.9°
N5C10C9H9169.6°173.8°
N5C10C9H9A70.9°66.1°
N5C10H10H10A120.2°120.5°
C10N5C11H1151.3°68.5°
C10N5C11H11A169.5°170.9°
C12C11N5H11120.0°119.7°
C12C11N5H11A121.8°119.8°
C11C12N4H12120.0°119.9°
C11C12N4H12A122.8°120.0°
C12C11N5S2167.8°128.8°
C12C11H11H11A121.9°120.5°
C11C12H12H12A123.1°120.1°
N5C11C12N471.3°53.8°
C11N5S2C13171.8°90.0°
C11N5S2O267.6°153.9°
C11N5S2O152.3°26.0°
C11N5C10H10177.0°170.9°
C11N5C10H10A63.2°68.6°
N5C11H11H11A121.9°120.4°
N5C11C12H1248.7°66.1°
N5C11C12H12A166.0°173.8°
C12N4C7H746.7°54.3°
C12N4C7H7A167.5°174.3°
C12N4C9H9179.7°176.9°
C12N4C9H9A60.2°56.9°
N4C12C11H1148.7°65.9°
N4C12C11H11A166.9°173.5°
N4C12H12H12A123.1°120.1°
N3C14C15H14120.0°119.9°
N3C14C15H14A120.0°120.0°
C14N3C17C1656.5°58.6°
N3C14H14H14A120.0°120.1°
N3C14C15H1572.8°63.1°
N3C14C15H15A166.0°176.7°
C14N3C17H17176.5°178.6°
C14N3C17H17A64.9°61.4°
C17N3C14C1548.7°58.6°
N3C17C16H17120.0°120.0°
N3C17C16H17A121.4°119.9°
C17N3C14H1471.3°61.3°
C17N3C14H14A168.7°178.6°
N3C17C16H16176.6°176.8°
N3C17C16H16A57.2°63.1°
N3C17H17H17A121.5°120.0°
C13S2O2O1121.8°131.5°
C13S2O2N5118.3°111.8°
C13S2O1N5118.8°111.8°
S2C13H13H13A120.0°120.0°
S2C13H13H13B120.0°120.0°
S2C13H13AH13B120.0°120.0°
C15C14H14H14A120.0°120.1°
C14C15H15H15A118.9°120.2°
O2S2O1N5118.0°116.8°
O2S2C13H13126.9°51.6°
O2S2C13H13A6.8°171.7°
O2S2C13H13B113.2°68.3°
O1S2C13H13110.9°171.7°
O1S2C13H13A129.1°51.7°
O1S2C13H13B9.1°68.4°
S2N5C10H1062.9°9.1°
S2N5C10H10A56.9°111.5°
S2N5C11H1172.2°111.5°
S2N5C11H11A46.1°9.0°
N5S2C13H139.2°60.0°
N5S2C13H13A110.8°60.0°
N5S2C13H13B129.1°180.0°
C1C2C6H6179.7°179.8°
C18C19C20H19180.0°180.0°
C18C19C20C210.1°0.0°
C18C19C20H20179.9°180.0°
C19C20C21H20180.0°180.0°
C19C20C21N6179.9°180.0°
C19C20C21C220.4°0.3°
C20C19C18H18178.9°180.0°
C20C21N6C22179.5°179.7°
C20C21N6N7179.7°180.0°
C20C21C22C23179.5°179.6°
C21C20C19H19179.9°180.0°
C20C21N6HN60.3°0.1°
C21N6N7HN6180.0°179.9°
N6C21C22C230.1°0.1°
C21N6N7C230.4°0.6°
N6C21C20H200.1°0.0°
C22C21N6N70.1°0.3°
C21C22C23N70.4°0.5°
C22C21C20H20179.6°179.7°
C22C21N6HN6179.9°179.8°
C21C22C23H23179.6°179.8°
N6N7C23C220.5°0.7°
N6N7C23H23179.5°179.9°
C22C23N7H23180.0°179.2°
C23N7N6HN6179.6°179.5°
C17C16H16H16A120.7°120.1°
C16C17H17H17A121.6°120.1°
H9C9C10H1070.4°66.6°
H9C9C10H10A49.4°54.1°
H9AC9C10H1049.1°53.5°
H9AC9C10H10A168.9°174.2°
H11C11C12H12168.7°174.2°
H11C11C12H12A74.1°54.1°
H11AC11C12H1273.0°53.6°
H11AC11C12H12A44.2°66.5°
H13C13H13AH13B120.0°120.1°
H14C14C15H15167.2°177.0°
H14C14C15H15A46.0°56.8°
H14AC14C15H1547.3°56.9°
H14AC14C15H15A74.0°63.3°
H18C18C19H191.1°0.1°
H19C19C20H200.1°0.0°
H16C16C17H1756.6°63.3°
H16C16C17H17A62.0°56.8°
H16AC16C17H1762.8°56.9°
H16AC16C17H17A178.6°177.0°

220472

PDB entries from 2024-05-29

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