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GD4

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CAACAXsing1.51Å1.53Å
CABCAYsing1.51Å1.52Å
CAXCAYdoub1.38Å1.40ÅAromatic
CAXCBAsing1.39Å1.41ÅAromatic
CAYCBCsing1.39Å1.41ÅAromatic
OAGCBAsing1.36Å1.40Å
CBACAZdoub1.39Å1.40ÅAromatic
CBCOARsing1.36Å1.44Å
CBCCBBdoub1.38Å1.40ÅAromatic
OARCBEsing1.43Å1.41Å
CAZCBBsing1.39Å1.41ÅAromatic
CAZCACsing1.51Å1.53Å
CADCBEsing1.53Å1.52Å
CBBCALsing1.51Å1.55Å
CAMCBEsing1.53Å1.51Å
CAMCALsing1.53Å1.50Å
CBECANsing1.53Å1.54Å
CANOAQsing1.43Å1.40Å
OAQCAWsing1.36Å1.39Å
CAWCAJdoub1.39Å1.38ÅAromatic
CAWCAKsing1.39Å1.38ÅAromatic
CAJCAHsing1.38Å1.38ÅAromatic
CAKCAIdoub1.38Å1.38ÅAromatic
CAHCAVdoub1.38Å1.38ÅAromatic
CAICAVsing1.38Å1.38ÅAromatic
CAVCAOsing1.51Å1.52Å
CAOCBDsing1.53Å1.51Å
CBDSASsing1.82Å1.65Å
CBDCAUsing1.51Å1.64Å
SASCATsing1.77Å1.63Å
OAFCAUdoub1.21Å1.18Å
CAUNAPsing1.32Å1.60Å
CATNAPsing1.33Å1.59Å
CATOAEdoub1.22Å1.18Å
CAMH1sing1.09Å1.10Å
CAMH2sing1.09Å1.10Å
CALH3sing1.09Å1.10Å
CALH4sing1.09Å1.10Å
CACH5sing1.09Å1.10Å
CACH6sing1.09Å1.10Å
CACH7sing1.09Å1.10Å
OAGH8sing0.97Å0.95Å
CAAH9sing1.09Å1.10Å
CAAH10sing1.09Å1.10Å
CAAH11sing1.09Å1.10Å
CABH12sing1.09Å1.10Å
CABH13sing1.09Å1.10Å
CABH14sing1.09Å1.10Å
CADH15sing1.09Å1.10Å
CADH16sing1.09Å1.10Å
CADH17sing1.09Å1.10Å
CANH18sing1.09Å1.10Å
CANH19sing1.09Å1.10Å
CAKH20sing1.08Å1.08Å
CAIH21sing1.08Å1.08Å
CAJH22sing1.08Å1.08Å
CAHH23sing1.08Å1.08Å
CAOH24sing1.09Å1.10Å
CAOH25sing1.09Å1.10Å
CBDH26sing1.09Å1.10Å
NAPH27sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CAACAXCAY120.3°120.1°
CAACAXCBA119.8°120.0°
CAXCAAH9109.5°109.4°
CAXCAAH10109.5°109.5°
CAXCAAH11109.5°109.4°
CABCAYCAX119.7°119.9°
CABCAYCBC120.0°119.8°
CAYCABH12109.5°109.5°
CAYCABH13109.5°109.5°
CAYCABH14109.5°109.4°
CAYCAXCBA120.0°119.9°
CAXCAYCBC120.3°120.3°
CAXCBAOAG119.8°120.1°
CAXCBACAZ120.0°119.9°
CAYCBCOAR118.6°118.4°
CAYCBCCBB119.5°119.8°
OAGCBACAZ120.2°120.1°
CBAOAGH8109.5°114.0°
CBACAZCBB120.1°120.3°
CBACAZCAC120.1°119.9°
OARCBCCBB121.9°121.8°
CBCOARCBE117.3°117.8°
CBCCBBCAZ120.2°119.9°
CBCCBBCAL120.2°121.4°
OARCBECAD108.6°109.7°
OARCBECAM115.0°108.4°
OARCBECAN108.8°109.7°
CBBCAZCAC119.8°119.9°
CAZCBBCAL119.6°118.7°
CAZCACH5109.5°109.4°
CAZCACH6109.5°109.5°
CAZCACH7109.5°109.5°
CADCBECAM108.6°109.7°
CADCBECAN108.2°109.7°
CBECADH15109.5°109.5°
CBECADH16109.4°109.5°
CBECADH17109.5°109.5°
CBBCALCAM110.9°109.7°
CBBCALH3109.1°109.4°
CBBCALH4109.1°109.3°
CBECAMCAL111.4°108.3°
CAMCBECAN107.5°109.7°
CBECAMH1109.0°109.7°
CBECAMH2109.0°109.7°
CALCAMH1109.0°109.7°
CALCAMH2109.0°109.7°
CAMCALH3109.1°109.5°
CAMCALH4109.1°109.5°
CBECANOAQ108.3°109.5°
CBECANH18109.8°109.5°
CBECANH19109.8°109.4°
CANOAQCAW111.0°117.0°
OAQCANH18109.7°109.5°
OAQCANH19109.7°109.5°
OAQCAWCAJ119.5°120.0°
OAQCAWCAK119.8°120.1°
CAJCAWCAK120.6°119.9°
CAWCAJCAH119.8°119.9°
CAWCAJH22120.1°120.1°
CAWCAKCAI119.6°120.0°
CAWCAKH20120.2°120.0°
CAJCAHCAV119.6°120.1°
CAHCAJH22120.1°120.0°
CAJCAHH23120.2°119.9°
CAKCAICAV119.6°120.1°
CAICAKH20120.2°120.0°
CAKCAIH21120.2°120.0°
CAHCAVCAI120.7°120.1°
CAHCAVCAO119.5°120.0°
CAVCAHH23120.2°120.0°
CAICAVCAO119.8°120.0°
CAVCAIH21120.1°119.9°
CAVCAOCBD107.3°109.5°
CAVCAOH24110.0°109.5°
CAVCAOH25110.0°109.5°
CAOCBDSAS110.1°110.7°
CAOCBDCAU108.6°110.7°
CBDCAOH24110.0°109.4°
CBDCAOH25110.0°109.5°
CAOCBDH26111.6°110.6°
SASCBDCAU106.9°103.0°
CBDSASCAT106.8°94.3°
SASCBDH26109.7°110.7°
CBDCAUOAF125.6°123.1°
CBDCAUNAP108.0°113.8°
CAUCBDH26109.9°110.9°
SASCATNAP108.5°107.7°
SASCATOAE125.8°126.2°
OAFCAUNAP126.4°123.1°
CAUNAPCAT109.5°121.2°
CAUNAPH27125.3°119.3°
NAPCATOAE125.7°126.1°
CATNAPH27125.2°119.5°
H1CAMH2109.5°109.7°
H3CALH4109.4°109.4°
H5CACH6109.4°109.4°
H5CACH7109.5°109.5°
H6CACH7109.5°109.6°
H9CAAH10109.5°109.5°
H9CAAH11109.5°109.4°
H10CAAH11109.4°109.5°
H12CABH13109.5°109.5°
H12CABH14109.5°109.5°
H13CABH14109.4°109.4°
H15CADH16109.5°109.5°
H15CADH17109.5°109.5°
H16CADH17109.5°109.4°
H18CANH19109.5°109.5°
H24CAOH25109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CAACAXCAYCAB0.2°0.1°
CAACAXCAYCBA180.0°180.0°
CAACAXCAYCBC180.0°180.0°
CAACAXCBAOAG0.1°0.1°
CAACAXCBACAZ180.0°180.0°
CAXCAAH9H10120.0°120.0°
CAXCAAH9H11120.0°119.9°
CAXCAAH10H11120.0°120.0°
CABCAYCAXCBC179.8°179.9°
CABCAYCAXCBA179.8°179.9°
CABCAYCBCOAR0.1°0.2°
CABCAYCBCCBB179.8°179.9°
CAYCABH12H13120.0°120.0°
CAYCABH12H14120.0°120.0°
CAYCABH13H14120.0°119.9°
CAYCAXCBAOAG179.9°179.9°
CAYCAXCBACAZ0.0°0.0°
CAXCAYCBCOAR179.7°179.7°
CAXCAYCBCCBB0.0°0.2°
CAYCAXCAAH990.0°90.0°
CAYCAXCAAH10150.0°150.0°
CAYCAXCAAH1130.0°30.0°
CAXCAYCABH1290.1°90.0°
CAXCAYCABH13149.9°150.0°
CAXCAYCABH1429.9°30.1°
CBACAXCAYCBC0.0°0.0°
CAXCBAOAGCAZ179.9°179.9°
CAXCBACAZCBB0.0°0.1°
CAXCBACAZCAC180.0°180.0°
CAXCBAOAGH8180.0°89.9°
CBACAXCAAH990.0°90.1°
CBACAXCAAH1030.0°30.0°
CBACAXCAAH11150.0°150.0°
CAYCBCOARCBB179.7°179.8°
CAYCBCOARCBE172.9°163.0°
CAYCBCCBBCAZ0.0°0.3°
CAYCBCCBBCAL179.9°179.7°
CBCCAYCABH1290.1°89.9°
CBCCAYCABH1329.9°30.1°
CBCCAYCABH14149.9°150.0°
OAGCBACAZCBB179.9°180.0°
OAGCBACAZCAC0.0°0.1°
CBACAZCBBCBC0.0°0.2°
CBACAZCBBCAC179.9°179.9°
CBACAZCBBCAL179.9°179.7°
CBACAZCACH590.1°90.0°
CBACAZCACH6150.0°29.9°
CBACAZCACH729.9°150.0°
CAZCBAOAGH80.1°90.0°
OARCBCCBBCAZ179.7°179.6°
CBCOARCBECAD157.4°70.6°
OARCBCCBBCAL0.2°0.5°
CBCOARCBECAM35.5°49.2°
CBCOARCBECAN85.0°168.9°
CBBCBCOARCBE7.5°17.2°
CBCCBBCAZCAL179.9°180.0°
CBCCBBCAZCAC179.9°179.8°
CBCCBBCALCAM20.7°17.9°
CBCCBBCALH399.6°102.2°
CBCCBBCALH4140.9°137.9°
OARCBECADCAM125.7°118.9°
OARCBECADCAN117.9°120.5°
OARCBECAMCAN121.3°119.7°
OARCBECAMCAL56.4°64.8°
OARCBECANOAQ170.7°61.1°
OARCBECAMH163.9°54.9°
OARCBECAMH2176.7°175.5°
OARCBECADH15180.0°59.0°
OARCBECADH1660.0°61.1°
OARCBECADH1760.0°178.9°
OARCBECANH1850.9°58.9°
OARCBECANH1969.5°178.9°
CAZCBBCALCAM159.2°162.1°
CAZCBBCALH380.6°77.7°
CAZCBBCALH439.0°42.1°
CBBCAZCACH590.0°90.1°
CBBCAZCACH630.0°150.0°
CBBCAZCACH7150.0°29.9°
CACCAZCBBCAL0.2°0.2°
CAZCACH5H6120.0°119.9°
CAZCACH5H7120.0°120.0°
CAZCACH6H7120.0°120.1°
CADCBECAMCAN116.9°120.6°
CADCBECAMCAL178.3°55.0°
CADCBECANOAQ52.9°59.4°
CADCBECAMH158.0°174.7°
CADCBECAMH261.4°64.7°
CBECADH15H16120.0°120.0°
CBECADH15H17120.0°120.0°
CBECADH16H17120.0°120.0°
CADCBECANH1866.9°179.5°
CADCBECANH19172.7°60.5°
CBBCALCAMCBE46.4°48.3°
CBBCALCAMH3120.2°120.1°
CBBCALCAMH4120.2°120.0°
CBBCALCAMH173.9°71.4°
CBBCALCAMH2166.7°168.0°
CBBCALH3H4119.3°119.8°
CBECAMCALH1120.3°119.7°
CBECAMCALH2120.3°119.7°
CAMCBECANOAQ64.2°180.0°
CBECAMH1H2119.1°120.6°
CBECAMCALH373.8°71.8°
CBECAMCALH4166.6°168.3°
CAMCBECADH1554.3°60.0°
CAMCBECADH1665.7°180.0°
CAMCBECADH17174.3°60.0°
CAMCBECANH18175.9°60.0°
CAMCBECANH1955.6°60.0°
CALCAMCBECAN64.8°175.5°
CALCAMH1H2119.1°120.6°
CAMCALH3H4119.3°120.0°
CBECANOAQH18119.8°120.0°
CBECANOAQH19119.8°119.9°
CBECANOAQCAW161.1°180.0°
CANCBECAMH1174.9°64.7°
CANCBECAMH255.5°55.9°
CANCBECADH1562.1°179.5°
CANCBECADH16177.9°59.4°
CANCBECADH1758.0°60.5°
CBECANH18H19120.6°119.9°
CANOAQCAWCAJ91.0°180.0°
CANOAQCAWCAK88.2°0.3°
OAQCANH18H19120.5°120.1°
OAQCAWCAJCAK179.1°179.7°
OAQCAWCAJCAH179.5°179.9°
OAQCAWCAKCAI179.5°180.0°
CAWOAQCANH1841.3°60.0°
CAWOAQCANH1979.0°60.1°
OAQCAWCAKH200.5°0.0°
OAQCAWCAJH220.5°0.0°
CAWCAJCAHH22180.0°179.9°
CAJCAWCAKCAI0.3°0.3°
CAWCAJCAHCAV0.1°0.1°
CAJCAWCAKH20179.7°179.7°
CAWCAJCAHH23179.9°180.0°
CAKCAWCAJCAH0.3°0.2°
CAWCAKCAIH20180.0°180.0°
CAWCAKCAICAV0.1°0.0°
CAWCAKCAIH21179.9°180.0°
CAKCAWCAJH22179.7°179.7°
CAJCAHCAVH23180.0°179.9°
CAJCAHCAVCAI0.1°0.4°
CAJCAHCAVCAO179.7°179.9°
CAKCAICAVCAH0.1°0.3°
CAKCAICAVH21180.0°180.0°
CAKCAICAVCAO179.7°179.9°
CAHCAVCAICAO179.6°179.7°
CAHCAVCAOCBD114.4°89.7°
CAHCAVCAIH21179.9°179.7°
CAVCAHCAJH22179.9°180.0°
CAHCAVCAOH24126.0°30.3°
CAHCAVCAOH255.3°150.3°
CAICAVCAOCBD65.2°90.1°
CAVCAICAKH20179.9°180.0°
CAICAVCAHH23179.8°179.7°
CAICAVCAOH2454.4°150.0°
CAICAVCAOH25175.1°30.0°
CAVCAOCBDH24119.7°120.0°
CAVCAOCBDH25119.7°120.0°
CAVCAOCBDSAS132.9°66.5°
CAVCAOCBDCAU110.4°180.0°
CAOCAVCAIH210.3°0.0°
CAOCAVCAHH230.2°0.0°
CAVCAOH24H25121.0°120.0°
CAVCAOCBDH2610.8°56.6°
CAOCBDSASCAU117.7°118.4°
CAOCBDSASH26123.1°123.1°
CAOCBDCAUH26122.3°123.2°
CAOCBDSASCAT122.6°118.4°
CAOCBDCAUOAF58.2°61.7°
CAOCBDCAUNAP121.4°118.3°
CBDCAOH24H25121.0°120.0°
SASCBDCAUH26119.0°118.5°
SASCBDCAUOAF176.9°180.0°
SASCBDCAUNAP2.7°0.0°
CBDSASCATNAP5.2°0.0°
CBDSASCATOAE174.7°180.0°
SASCBDCAOH24107.5°173.5°
SASCBDCAOH2513.2°53.6°
CAUCBDSASCAT4.8°0.0°
CBDCAUOAFNAP179.5°180.0°
CBDCAUNAPCAT0.6°0.0°
CAUCBDCAOH249.2°60.0°
CAUCBDCAOH25129.9°60.0°
CBDCAUNAPH27179.4°180.0°
SASCATNAPCAU3.7°0.0°
SASCATNAPOAE179.9°180.0°
CATSASCBDH26114.3°118.6°
SASCATNAPH27176.3°180.0°
OAFCAUNAPCAT179.8°180.0°
OAFCAUCBDH2664.1°61.5°
OAFCAUNAPH270.2°0.0°
CAUNAPCATH27180.0°180.0°
CAUNAPCATOAE176.2°180.0°
NAPCAUCBDH26116.3°118.5°
OAECATNAPH273.8°0.1°
H1CAMCALH3165.9°168.5°
H1CAMCALH446.4°48.5°
H2CAMCALH346.5°47.9°
H2CAMCALH473.0°72.0°
H5CACH6H7120.0°120.0°
H9CAAH10H11120.0°120.0°
H12CABH13H14120.0°120.0°
H15CADH16H17120.0°120.0°
H20CAKCAIH210.1°0.0°
H22CAJCAHH230.1°0.1°
H24CAOCBDH26130.5°63.4°
H25CAOCBDH26108.8°176.7°

225946

PDB entries from 2024-10-09

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