GCP
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| PG | O1G | doub | 1.48Å | 1.49Å | |
| PG | O2G | sing | 1.61Å | 1.48Å | |
| PG | O3G | sing | 1.61Å | 1.49Å | |
| PG | C3B | sing | 1.82Å | 1.81Å | |
| O2G | HOG2 | sing | 0.97Å | 0.95Å | |
| O3G | HOG3 | sing | 0.97Å | 0.95Å | |
| C3B | PB | sing | 1.82Å | 1.79Å | |
| C3B | H3B1 | sing | 1.09Å | 1.11Å | |
| C3B | H3B2 | sing | 1.09Å | 1.11Å | |
| PB | O1B | doub | 1.48Å | 1.49Å | |
| PB | O2B | sing | 1.61Å | 1.47Å | |
| PB | O3A | sing | 1.61Å | 1.62Å | |
| O2B | HOB2 | sing | 0.97Å | 0.95Å | |
| O3A | PA | sing | 1.61Å | 1.64Å | |
| PA | O1A | doub | 1.48Å | 1.49Å | |
| PA | O2A | sing | 1.61Å | 1.49Å | |
| PA | O5' | sing | 1.61Å | 1.62Å | |
| O2A | HOA2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.46Å | |
| C5' | C4' | sing | 1.53Å | 1.51Å | |
| C5' | H5'2 | sing | 1.09Å | 1.09Å | |
| C5' | H5'1 | sing | 1.09Å | 1.09Å | |
| C4' | O4' | sing | 1.44Å | 1.40Å | |
| C4' | C3' | sing | 1.54Å | 1.50Å | |
| C4' | H4' | sing | 1.09Å | 1.09Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.45Å | |
| C3' | C2' | sing | 1.55Å | 1.51Å | |
| C3' | H3' | sing | 1.09Å | 1.09Å | |
| O3' | HO3' | sing | 0.97Å | 0.96Å | |
| C2' | O2' | sing | 1.43Å | 1.43Å | |
| C2' | C1' | sing | 1.54Å | 1.56Å | |
| C2' | H2' | sing | 1.09Å | 1.09Å | |
| O2' | HO2' | sing | 0.97Å | 0.96Å | |
| C1' | N9 | sing | 1.46Å | 1.39Å | |
| C1' | H1' | sing | 1.09Å | 1.09Å | |
| N9 | C8 | sing | 1.36Å | 1.36Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.42Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.09Å | |
| N7 | C5 | sing | 1.36Å | 1.40Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.42Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.39Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.35Å | 1.39Å | Aromatic |
| N1 | C2 | sing | 1.36Å | 1.39Å | Aromatic |
| N1 | HN1 | sing | 0.97Å | 1.01Å | |
| C2 | N2 | sing | 1.37Å | 1.34Å | |
| C2 | N3 | doub | 1.31Å | 1.36Å | Aromatic |
| N2 | HN21 | sing | 0.97Å | 0.98Å | |
| N2 | HN22 | sing | 0.97Å | 0.98Å | |
| N3 | C4 | sing | 1.34Å | 1.39Å | Aromatic |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O1G | PG | O2G | 113.3° | 109.5° |
| O1G | PG | O3G | 114.1° | 109.4° |
| O1G | PG | C3B | 107.1° | 109.5° |
| O2G | PG | O3G | 114.9° | 109.4° |
| O2G | PG | C3B | 104.7° | 109.5° |
| PG | O2G | HOG2 | 113.3° | 106.9° |
| O3G | PG | C3B | 101.1° | 109.5° |
| PG | O3G | HOG3 | 114.0° | 106.8° |
| PG | C3B | PB | 138.3° | 109.5° |
| PG | C3B | H3B1 | 102.5° | 109.5° |
| PG | C3B | H3B2 | 102.5° | 109.5° |
| PB | C3B | H3B1 | 102.4° | 109.4° |
| PB | C3B | H3B2 | 102.3° | 109.5° |
| C3B | PB | O1B | 109.8° | 109.5° |
| C3B | PB | O2B | 99.2° | 109.4° |
| C3B | PB | O3A | 115.7° | 109.4° |
| H3B1 | C3B | H3B2 | 105.8° | 109.5° |
| O1B | PB | O2B | 118.1° | 109.5° |
| O1B | PB | O3A | 109.6° | 109.5° |
| O2B | PB | O3A | 104.4° | 109.5° |
| PB | O2B | HOB2 | 99.2° | 106.8° |
| PB | O3A | PA | 132.2° | 106.8° |
| O3A | PA | O1A | 112.0° | 109.5° |
| O3A | PA | O2A | 104.5° | 109.5° |
| O3A | PA | O5' | 116.1° | 109.5° |
| O1A | PA | O2A | 119.8° | 109.4° |
| O1A | PA | O5' | 99.1° | 109.5° |
| O2A | PA | O5' | 105.7° | 109.5° |
| PA | O2A | HOA2 | 104.5° | 106.8° |
| PA | O5' | C5' | 128.3° | 106.8° |
| O5' | C5' | C4' | 113.2° | 109.5° |
| O5' | C5' | H5'2 | 107.6° | 109.5° |
| O5' | C5' | H5'1 | 109.0° | 109.5° |
| C4' | C5' | H5'2 | 106.6° | 109.5° |
| C4' | C5' | H5'1 | 109.4° | 109.4° |
| C5' | C4' | O4' | 110.8° | 110.4° |
| C5' | C4' | C3' | 109.7° | 110.5° |
| C5' | C4' | H4' | 110.8° | 110.4° |
| H5'2 | C5' | H5'1 | 111.0° | 109.5° |
| O4' | C4' | C3' | 102.9° | 104.8° |
| O4' | C4' | H4' | 110.8° | 110.4° |
| C4' | O4' | C1' | 111.3° | 105.3° |
| C3' | C4' | H4' | 111.5° | 110.4° |
| C4' | C3' | O3' | 107.7° | 110.5° |
| C4' | C3' | C2' | 102.6° | 104.1° |
| C4' | C3' | H3' | 111.0° | 110.5° |
| O4' | C1' | C2' | 94.4° | 104.9° |
| O4' | C1' | N9 | 100.1° | 110.4° |
| O4' | C1' | H1' | 111.8° | 110.4° |
| O3' | C3' | C2' | 119.5° | 110.6° |
| O3' | C3' | H3' | 110.4° | 110.5° |
| C3' | O3' | HO3' | 108.9° | 106.8° |
| C2' | C3' | H3' | 105.4° | 110.6° |
| C3' | C2' | O2' | 100.2° | 110.5° |
| C3' | C2' | C1' | 107.9° | 104.0° |
| C3' | C2' | H2' | 109.0° | 110.5° |
| O2' | C2' | C1' | 114.5° | 110.8° |
| O2' | C2' | H2' | 113.3° | 110.5° |
| C2' | O2' | HO2' | 107.9° | 106.8° |
| C1' | C2' | H2' | 111.1° | 110.4° |
| C2' | C1' | N9 | 124.0° | 110.4° |
| C2' | C1' | H1' | 111.9° | 110.3° |
| N9 | C1' | H1' | 111.8° | 110.3° |
| C1' | N9 | C8 | 124.3° | 126.2° |
| C1' | N9 | C4 | 131.2° | 126.3° |
| C8 | N9 | C4 | 102.4° | 107.5° |
| N9 | C8 | N7 | 118.8° | 109.8° |
| N9 | C8 | H8 | 121.2° | 125.1° |
| N9 | C4 | C5 | 106.2° | 106.1° |
| N9 | C4 | N3 | 129.2° | 134.2° |
| N7 | C8 | H8 | 120.0° | 125.1° |
| C8 | N7 | C5 | 101.1° | 109.3° |
| N7 | C5 | C6 | 128.4° | 134.1° |
| N7 | C5 | C4 | 111.5° | 107.3° |
| C6 | C5 | C4 | 120.0° | 118.6° |
| C5 | C6 | O6 | 127.2° | 120.8° |
| C5 | C6 | N1 | 113.1° | 118.3° |
| C5 | C4 | N3 | 124.6° | 119.7° |
| O6 | C6 | N1 | 119.7° | 120.9° |
| C6 | N1 | C2 | 126.4° | 120.4° |
| C6 | N1 | HN1 | 119.7° | 119.8° |
| C2 | N1 | HN1 | 113.9° | 119.8° |
| N1 | C2 | N2 | 117.6° | 119.1° |
| N1 | C2 | N3 | 119.7° | 121.8° |
| N2 | C2 | N3 | 122.7° | 119.1° |
| C2 | N2 | HN21 | 119.9° | 120.0° |
| C2 | N2 | HN22 | 121.3° | 120.0° |
| C2 | N3 | C4 | 116.1° | 121.2° |
| HN21 | N2 | HN22 | 118.6° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O1G | PG | O2G | O3G | 133.6° | 119.9° |
| O1G | PG | O2G | C3B | 116.4° | 120.1° |
| O1G | PG | O3G | C3B | 114.6° | 120.0° |
| O1G | PG | O2G | HOG2 | 180.0° | 59.9° |
| O1G | PG | O3G | HOG3 | 180.0° | 179.9° |
| O1G | PG | C3B | PB | 73.2° | 60.0° |
| O1G | PG | C3B | H3B1 | 52.0° | 60.0° |
| O1G | PG | C3B | H3B2 | 161.5° | 180.0° |
| O2G | PG | O3G | C3B | 112.1° | 120.0° |
| O2G | PG | O3G | HOG3 | 46.7° | 60.0° |
| O2G | PG | C3B | PB | 47.4° | 180.0° |
| O2G | PG | C3B | H3B1 | 172.6° | 60.0° |
| O2G | PG | C3B | H3B2 | 77.8° | 60.0° |
| O3G | PG | O2G | HOG2 | 46.4° | 60.0° |
| O3G | PG | C3B | PB | 167.1° | 60.0° |
| O3G | PG | C3B | H3B1 | 67.6° | 180.0° |
| O3G | PG | C3B | H3B2 | 41.9° | 60.0° |
| C3B | PG | O2G | HOG2 | 63.6° | 180.0° |
| C3B | PG | O3G | HOG3 | 65.4° | 60.0° |
| PG | C3B | PB | H3B1 | 125.3° | 120.0° |
| PG | C3B | PB | H3B2 | 125.3° | 120.0° |
| PG | C3B | H3B1 | H3B2 | 107.0° | 120.1° |
| PG | C3B | PB | O1B | 39.7° | 60.0° |
| PG | C3B | PB | O2B | 164.2° | 60.0° |
| PG | C3B | PB | O3A | 84.9° | 180.0° |
| PB | C3B | H3B1 | H3B2 | 106.8° | 120.0° |
| C3B | PB | O1B | O2B | 112.6° | 120.0° |
| C3B | PB | O1B | O3A | 128.1° | 120.0° |
| C3B | PB | O2B | O3A | 119.7° | 119.9° |
| C3B | PB | O2B | HOB2 | 180.0° | 60.0° |
| C3B | PB | O3A | PA | 140.8° | 180.0° |
| H3B1 | C3B | PB | O1B | 85.6° | 60.0° |
| H3B1 | C3B | PB | O2B | 38.9° | 180.0° |
| H3B1 | C3B | PB | O3A | 149.8° | 60.0° |
| H3B2 | C3B | PB | O1B | 165.0° | 180.0° |
| H3B2 | C3B | PB | O2B | 70.6° | 60.0° |
| H3B2 | C3B | PB | O3A | 40.3° | 60.0° |
| O1B | PB | O2B | O3A | 121.9° | 120.0° |
| O1B | PB | O2B | HOB2 | 61.6° | 180.0° |
| O1B | PB | O3A | PA | 94.4° | 60.0° |
| O2B | PB | O3A | PA | 33.0° | 60.0° |
| O3A | PB | O2B | HOB2 | 60.3° | 60.0° |
| PB | O3A | PA | O1A | 9.2° | 59.9° |
| PB | O3A | PA | O2A | 140.3° | 60.0° |
| PB | O3A | PA | O5' | 103.6° | 180.0° |
| O3A | PA | O1A | O2A | 122.8° | 120.0° |
| O3A | PA | O1A | O5' | 123.1° | 120.1° |
| O3A | PA | O2A | O5' | 123.1° | 120.1° |
| O3A | PA | O2A | HOA2 | 180.0° | 60.0° |
| O3A | PA | O5' | C5' | 37.2° | 180.0° |
| O1A | PA | O2A | O5' | 110.5° | 120.0° |
| O1A | PA | O2A | HOA2 | 53.6° | 180.0° |
| O1A | PA | O5' | C5' | 157.2° | 60.0° |
| O2A | PA | O5' | C5' | 78.2° | 60.0° |
| O5' | PA | O2A | HOA2 | 56.9° | 60.0° |
| PA | O5' | C5' | C4' | 145.6° | 180.0° |
| PA | O5' | C5' | H5'2 | 28.1° | 60.0° |
| PA | O5' | C5' | H5'1 | 92.4° | 60.0° |
| O5' | C5' | C4' | H5'2 | 118.1° | 120.0° |
| O5' | C5' | C4' | H5'1 | 121.8° | 120.0° |
| O5' | C5' | H5'2 | H5'1 | 119.2° | 120.0° |
| O5' | C5' | C4' | O4' | 73.5° | 61.5° |
| O5' | C5' | C4' | C3' | 39.4° | 176.9° |
| O5' | C5' | C4' | H4' | 163.0° | 60.8° |
| C4' | C5' | H5'2 | H5'1 | 119.1° | 120.0° |
| C5' | C4' | O4' | C3' | 117.2° | 119.0° |
| C5' | C4' | O4' | H4' | 123.5° | 122.2° |
| C5' | C4' | C3' | H4' | 123.2° | 122.3° |
| C5' | C4' | O4' | C1' | 161.1° | 159.5° |
| C5' | C4' | C3' | O3' | 97.4° | 98.3° |
| C5' | C4' | C3' | C2' | 135.8° | 142.9° |
| C5' | C4' | C3' | H3' | 23.6° | 24.2° |
| H5'2 | C5' | C4' | O4' | 168.5° | 58.5° |
| H5'2 | C5' | C4' | C3' | 78.6° | 56.9° |
| H5'2 | C5' | C4' | H4' | 44.9° | 179.3° |
| H5'1 | C5' | C4' | O4' | 48.3° | 178.5° |
| H5'1 | C5' | C4' | C3' | 161.2° | 63.1° |
| H5'1 | C5' | C4' | H4' | 75.2° | 59.2° |
| O4' | C4' | C3' | H4' | 118.8° | 118.8° |
| O4' | C4' | C3' | O3' | 144.6° | 142.8° |
| O4' | C4' | C3' | C2' | 17.8° | 24.1° |
| O4' | C4' | C3' | H3' | 94.4° | 94.7° |
| C4' | O4' | C1' | C2' | 46.4° | 40.4° |
| C4' | O4' | C1' | N9 | 172.2° | 159.4° |
| C4' | O4' | C1' | H1' | 69.3° | 78.4° |
| C3' | C4' | O4' | C1' | 43.9° | 40.5° |
| C4' | C3' | O3' | C2' | 116.3° | 114.7° |
| C4' | C3' | O3' | H3' | 121.3° | 122.6° |
| C4' | C3' | C2' | H3' | 116.2° | 118.6° |
| C4' | C3' | O3' | HO3' | 30.4° | 180.0° |
| C4' | C3' | C2' | O2' | 129.1° | 118.8° |
| C4' | C3' | C2' | C1' | 9.1° | 0.1° |
| C4' | C3' | C2' | H2' | 111.7° | 118.6° |
| H4' | C4' | O4' | C1' | 75.4° | 78.3° |
| H4' | C4' | C3' | O3' | 25.8° | 24.0° |
| H4' | C4' | C3' | C2' | 101.1° | 94.7° |
| H4' | C4' | C3' | H3' | 146.8° | 146.6° |
| O4' | C1' | C2' | C3' | 31.6° | 23.8° |
| O4' | C1' | C2' | O2' | 142.1° | 142.6° |
| O4' | C1' | C2' | N9 | 105.3° | 118.9° |
| O4' | C1' | C2' | H1' | 115.6° | 118.9° |
| O4' | C1' | C2' | H2' | 87.9° | 94.7° |
| O4' | C1' | N9 | H1' | 118.5° | 122.3° |
| O4' | C1' | N9 | C8 | 38.2° | 27.0° |
| O4' | C1' | N9 | C4 | 122.5° | 153.0° |
| O3' | C3' | C2' | H3' | 124.9° | 122.7° |
| O3' | C3' | C2' | O2' | 10.2° | 0.1° |
| O3' | C3' | C2' | C1' | 109.8° | 118.8° |
| O3' | C3' | C2' | H2' | 129.4° | 122.7° |
| C2' | C3' | O3' | HO3' | 85.8° | 65.3° |
| C3' | C2' | O2' | C1' | 115.1° | 114.8° |
| C3' | C2' | O2' | H2' | 116.0° | 122.6° |
| C3' | C2' | C1' | H2' | 119.4° | 118.5° |
| C3' | C2' | O2' | HO2' | 78.9° | 61.4° |
| C3' | C2' | C1' | N9 | 136.9° | 142.8° |
| C3' | C2' | C1' | H1' | 84.0° | 95.0° |
| H3' | C3' | O3' | HO3' | 151.7° | 57.4° |
| H3' | C3' | C2' | O2' | 114.7° | 122.6° |
| H3' | C3' | C2' | C1' | 125.3° | 118.5° |
| H3' | C3' | C2' | H2' | 4.5° | 0.0° |
| O2' | C2' | C1' | H2' | 130.0° | 122.7° |
| O2' | C2' | C1' | N9 | 112.5° | 98.5° |
| O2' | C2' | C1' | H1' | 26.5° | 23.7° |
| C1' | C2' | O2' | HO2' | 166.0° | 176.2° |
| C2' | C1' | N9 | H1' | 139.1° | 122.2° |
| C2' | C1' | N9 | C8 | 64.3° | 88.5° |
| C2' | C1' | N9 | C4 | 135.1° | 91.5° |
| H2' | C2' | O2' | HO2' | 37.1° | 61.1° |
| H2' | C2' | C1' | N9 | 17.5° | 24.2° |
| H2' | C2' | C1' | H1' | 156.5° | 146.4° |
| C1' | N9 | C8 | C4 | 165.2° | 179.9° |
| C1' | N9 | C8 | N7 | 165.3° | 180.0° |
| C1' | N9 | C8 | H8 | 13.8° | 0.1° |
| C1' | N9 | C4 | C5 | 163.8° | 179.9° |
| C1' | N9 | C4 | N3 | 15.8° | 0.0° |
| H1' | C1' | N9 | C8 | 156.7° | 149.3° |
| H1' | C1' | N9 | C4 | 4.0° | 30.7° |
| N9 | C8 | N7 | H8 | 179.1° | 179.9° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | N3 | 179.6° | 179.9° |
| C4 | N9 | C8 | N7 | 0.1° | 0.0° |
| C4 | N9 | C8 | H8 | 179.0° | 179.9° |
| N9 | C4 | C5 | N7 | 0.0° | 0.0° |
| N9 | C4 | C5 | C6 | 179.8° | 180.0° |
| N9 | C4 | C5 | N3 | 179.6° | 179.9° |
| N9 | C4 | N3 | C2 | 179.4° | 180.0° |
| C8 | N7 | C5 | C6 | 179.8° | 180.0° |
| C8 | N7 | C5 | C4 | 0.0° | 0.1° |
| H8 | C8 | N7 | C5 | 179.0° | 180.0° |
| N7 | C5 | C6 | C4 | 179.8° | 180.0° |
| N7 | C5 | C6 | O6 | 3.1° | 0.1° |
| N7 | C5 | C6 | N1 | 179.1° | 179.7° |
| N7 | C5 | C4 | N3 | 179.6° | 180.0° |
| C5 | C6 | O6 | N1 | 177.7° | 179.6° |
| C5 | C6 | N1 | C2 | 1.5° | 0.6° |
| C5 | C6 | N1 | HN1 | 178.6° | 180.0° |
| C6 | C5 | C4 | N3 | 0.5° | 0.0° |
| C4 | C5 | C6 | O6 | 177.1° | 179.9° |
| C4 | C5 | C6 | N1 | 0.7° | 0.3° |
| C5 | C4 | N3 | C2 | 1.1° | 0.1° |
| O6 | C6 | N1 | C2 | 176.5° | 179.8° |
| O6 | C6 | N1 | HN1 | 3.4° | 0.4° |
| C6 | N1 | C2 | HN1 | 179.8° | 179.4° |
| C6 | N1 | C2 | N2 | 179.9° | 179.7° |
| C6 | N1 | C2 | N3 | 1.0° | 0.6° |
| N1 | C2 | N2 | N3 | 179.0° | 179.7° |
| N1 | C2 | N2 | HN21 | 121.5° | 179.8° |
| N1 | C2 | N2 | HN22 | 63.4° | 0.6° |
| N1 | C2 | N3 | C4 | 0.3° | 0.3° |
| HN1 | N1 | C2 | N2 | 0.1° | 0.3° |
| HN1 | N1 | C2 | N3 | 179.1° | 180.0° |
| C2 | N2 | HN21 | HN22 | 175.2° | 179.6° |
| N2 | C2 | N3 | C4 | 178.6° | 180.0° |
| N3 | C2 | N2 | HN21 | 59.5° | 0.1° |
| N3 | C2 | N2 | HN22 | 115.6° | 179.7° |
