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Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O2C2doub1.21Å1.23Å
C1CA1sing1.51Å1.53Å
C1O11doub1.21Å1.23Å
C1O12sing1.34Å1.24Å
C2N3sing1.35Å1.33Å
C2CA2sing1.51Å1.52Å
C3CA3sing1.51Å1.54Å
C3O31doub1.21Å1.23Å
C3O32sing1.34Å1.25Å
N1CA1sing1.47Å1.50Å
N1HN11sing1.01Å1.02Å
N1HN12sing1.01Å1.02Å
C7O7doub1.21Å1.25Å
C7C8sing1.50Å1.29Å
C7C2'sing1.48Å1.52Å
N2CD1sing1.35Å1.33Å
N2CA2sing1.46Å1.46Å
N2HN2sing0.97Å1.02Å
N3CA3sing1.47Å1.47Å
N3HN3sing0.97Å1.02Å
CA1CB1sing1.53Å1.53Å
CA1HA1sing1.09Å1.11Å
O12H12sing0.97Å0.95Å
CB1CG1sing1.53Å1.53Å
CB1HB11sing1.09Å1.12Å
CB1HB12sing1.09Å1.12Å
CG1CD1sing1.51Å1.52Å
CG1HG11sing1.09Å1.12Å
CG1HG12sing1.09Å1.11Å
CD1OE1doub1.21Å1.24Å
CA2CB2sing1.53Å1.53Å
CA2HA2sing1.09Å1.12Å
CB2SG2sing1.81Å1.82Å
CB2HB21sing1.09Å1.11Å
CB2HB22sing1.09Å1.12Å
SG2C10sing1.81Å1.86Å
CA3HA31sing1.09Å1.11Å
CA3HA32sing1.09Å1.11Å
O32H32sing0.97Å0.95Å
C8O8doub1.21Å1.25Å
C8C9sing1.52Å1.59Å
C9O9sing1.43Å1.44Å
C9C10sing1.53Å1.58Å
C9H9sing1.09Å1.11Å
O9HO9sing0.97Å0.95Å
C10C3'sing1.50Å1.55Å
C10H10sing1.09Å1.12Å
C1'C2'sing1.40Å1.44ÅAromatic
C1'C11doub1.39Å1.42ÅAromatic
C1'H1'sing1.08Å1.10Å
C2'C3'doub1.39Å1.46ÅAromatic
C3'C13sing1.40Å1.45ÅAromatic
C4'C5'doub1.35Å1.43ÅAromatic
C4'C13sing1.46Å1.45ÅAromatic
C4'H4'sing1.08Å1.10Å
C5'C16sing1.42Å1.43ÅAromatic
C5'H5'sing1.08Å1.10Å
C6'C7'doub1.38Å1.44ÅAromatic
C6'C16sing1.40Å1.43ÅAromatic
C6'H6'sing1.08Å1.10Å
C7'C8'sing1.38Å1.43ÅAromatic
C7'H7'sing1.08Å1.10Å
C8'C18doub1.40Å1.43ÅAromatic
C8'H8'sing1.08Å1.10Å
C9'C9Adoub1.35Å1.44ÅAromatic
C9'C18sing1.46Å1.43ÅAromatic
C9'H9'sing1.08Å1.10Å
C9AC11sing1.46Å1.44ÅAromatic
C9AH9Asing1.08Å1.10Å
C11C12sing1.42Å1.46ÅAromatic
C12C13doub1.41Å1.45ÅAromatic
C12C17sing1.41Å1.44ÅAromatic
C16C17doub1.41Å1.46ÅAromatic
C17C18sing1.42Å1.45ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C2N3123.5°120.0°
O2C2CA2120.0°120.0°
CA1C1O11120.4°120.0°
CA1C1O12116.8°120.0°
C1CA1N1112.4°109.5°
C1CA1CB1109.8°109.5°
C1CA1HA1107.7°109.5°
O11C1O12122.8°120.0°
C1O12H12116.9°120.0°
N3C2CA2116.5°120.0°
C2N3CA3124.9°120.0°
C2N3HN3112.2°120.0°
C2CA2N2107.6°109.5°
C2CA2CB2109.4°109.5°
C2CA2HA2111.5°109.4°
CA3C3O31120.0°120.0°
CA3C3O32118.6°120.0°
C3CA3N3114.2°109.5°
C3CA3HA31110.5°109.5°
C3CA3HA32110.5°109.5°
O31C3O32121.4°120.0°
C3O32H32118.6°120.0°
CA1N1HN11112.4°106.7°
CA1N1HN12111.2°106.8°
N1CA1CB1110.9°109.5°
N1CA1HA1106.6°109.5°
HN11N1HN12111.1°106.7°
O7C7C8113.4°122.1°
O7C7C2'113.5°122.0°
C8C7C2'111.5°115.9°
C7C8O8110.1°122.5°
C7C8C9114.2°114.9°
C7C2'C1'119.0°118.6°
C7C2'C3'120.5°120.0°
CD1N2CA2123.8°120.0°
CD1N2HN2113.1°120.0°
N2CD1CG1115.4°120.0°
N2CD1OE1123.5°120.1°
CA2N2HN2123.1°120.0°
N2CA2CB2111.4°109.5°
N2CA2HA2109.4°109.5°
CA3N3HN3122.9°119.9°
N3CA3HA31110.5°109.5°
N3CA3HA32110.4°109.4°
CB1CA1HA1109.3°109.4°
CA1CB1CG1113.2°109.5°
CA1CB1HB11110.9°109.4°
CA1CB1HB12110.9°109.5°
CG1CB1HB11110.9°109.5°
CG1CB1HB12110.8°109.5°
CB1CG1CD1113.5°109.5°
CB1CG1HG11110.7°109.4°
CB1CG1HG12110.7°109.5°
HB11CB1HB1299.4°109.5°
CD1CG1HG11110.7°109.5°
CD1CG1HG12110.7°109.5°
CG1CD1OE1121.0°119.9°
HG11CG1HG1299.6°109.5°
CB2CA2HA2107.6°109.5°
CA2CB2SG2115.6°109.4°
CA2CB2HB21110.0°109.5°
CA2CB2HB22110.0°109.5°
SG2CB2HB21110.0°109.4°
SG2CB2HB22109.9°109.5°
CB2SG2C10104.3°100.0°
HB21CB2HB22100.2°109.5°
SG2C10C9109.4°108.9°
SG2C10C3'109.9°108.9°
SG2C10H10109.9°109.0°
HA31CA3HA3299.8°109.4°
O8C8C9110.4°122.5°
C8C9O9110.5°109.9°
C8C9C10113.7°108.4°
C8C9H9105.5°109.6°
O9C9C10108.5°109.6°
O9C9H9111.0°109.7°
C9O9HO9110.5°106.7°
C10C9H9107.6°109.6°
C9C10C3'111.2°112.3°
C9C10H10108.5°108.9°
C3'C10H10107.9°108.9°
C10C3'C2'121.0°123.0°
C10C3'C13119.8°117.9°
C2'C1'C11120.3°120.3°
C2'C1'H1'120.8°119.8°
C1'C2'C3'120.4°121.4°
C11C1'H1'118.9°119.9°
C1'C11C9A120.4°121.2°
C1'C11C12119.9°119.0°
C2'C3'C13119.2°119.0°
C3'C13C4'121.3°120.8°
C3'C13C12119.2°120.0°
C5'C4'C13120.8°120.0°
C5'C4'H4'118.9°120.0°
C4'C5'C16119.8°121.0°
C4'C5'H5'120.3°119.5°
C13C4'H4'120.3°120.0°
C4'C13C12119.3°119.2°
C16C5'H5'119.9°119.5°
C5'C16C6'120.5°120.8°
C5'C16C17120.0°120.1°
C7'C6'C16119.9°120.3°
C7'C6'H6'120.3°119.9°
C6'C7'C8'121.1°121.3°
C6'C7'H7'119.8°119.4°
C16C6'H6'119.8°119.9°
C6'C16C17119.5°119.1°
C8'C7'H7'119.1°119.3°
C7'C8'C18120.2°120.2°
C7'C8'H8'119.7°119.9°
C18C8'H8'120.1°119.9°
C8'C18C9'120.4°121.1°
C8'C18C17119.4°119.2°
C9AC9'C18120.4°120.3°
C9AC9'H9'120.1°119.9°
C9'C9AC11120.2°120.2°
C9'C9AH9A119.7°119.9°
C18C9'H9'119.6°119.8°
C9'C18C17120.2°119.7°
C11C9AH9A120.1°119.9°
C9AC11C12119.7°119.7°
C11C12C13120.6°120.2°
C11C12C17119.6°120.1°
C13C12C17119.8°119.7°
C12C17C16120.2°120.0°
C12C17C18119.9°120.0°
C16C17C18119.9°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C2N3CA2179.7°180.0°
O2C2CA2N246.8°150.0°
O2C2N3CA30.3°0.0°
O2C2N3HN3179.7°179.9°
O2C2CA2CB274.4°90.0°
O2C2CA2HA2166.7°30.0°
CA1C1O11O12179.6°180.0°
C1CA1N1CB1123.3°120.0°
C1CA1N1HA1117.8°120.0°
C1CA1N1HN11180.0°59.9°
C1CA1N1HN1254.8°173.8°
C1CA1CB1HA1118.0°120.0°
CA1C1O12H12180.0°179.9°
C1CA1CB1CG171.1°180.0°
C1CA1CB1HB11163.6°60.0°
C1CA1CB1HB1254.2°60.0°
O11C1CA1N1147.5°30.0°
O11C1CA1CB188.6°90.0°
O11C1CA1HA130.4°150.0°
O11C1O12H120.3°0.1°
O12C1CA1N132.8°150.0°
O12C1CA1CB191.1°90.0°
O12C1CA1HA1150.0°30.0°
C2N3CA3C3125.3°180.0°
N3C2CA2N2132.9°30.0°
C2N3CA3HN3180.0°180.0°
N3C2CA2CB2105.9°90.0°
N3C2CA2HA212.9°150.0°
C2N3CA3HA310.0°60.0°
C2N3CA3HA32109.4°60.0°
C2CA2N2CD1126.3°90.0°
C2CA2N2CB2119.9°120.0°
C2CA2N2HA2121.3°120.0°
C2CA2N2HN253.7°90.0°
CA2C2N3CA3179.9°180.0°
CA2C2N3HN30.1°0.0°
C2CA2CB2HA2121.3°120.0°
C2CA2CB2SG2179.5°180.0°
C2CA2CB2HB2155.2°60.0°
C2CA2CB2HB2254.3°60.0°
CA3C3O31O32179.3°180.0°
C3CA3N3HA31125.3°120.0°
C3CA3N3HA32125.2°120.0°
C3CA3N3HN354.7°0.0°
C3CA3HA31HA32116.3°120.1°
CA3C3O32H32180.0°180.0°
O31C3CA3N3177.0°0.0°
O31C3CA3HA3157.7°120.0°
O31C3CA3HA3251.8°120.0°
O31C3O32H320.7°0.1°
O32C3CA3N32.3°180.0°
O32C3CA3HA31123.0°60.0°
O32C3CA3HA32127.5°60.0°
CA1N1HN11HN12125.3°113.9°
N1CA1CB1HA1117.2°120.0°
N1CA1CB1CG1164.1°60.0°
N1CA1CB1HB1138.8°60.0°
N1CA1CB1HB1270.6°180.0°
HN11N1CA1CB156.6°60.1°
HN11N1CA1HA162.2°180.0°
HN12N1CA1CB168.6°53.8°
HN12N1CA1HA1172.6°66.2°
O7C7C8C2'129.6°179.9°
O7C7C8O8165.7°34.6°
O7C7C8C969.4°145.4°
O7C7C2'C1'80.8°5.5°
O7C7C2'C3'97.0°174.3°
C7C8O8C9127.1°180.0°
C7C8C9O9178.3°63.1°
C7C8C9C1056.0°56.7°
C7C8C9H961.7°176.3°
C8C7C2'C1'149.7°174.6°
C8C7C2'C3'32.5°5.6°
C2'C7C8O864.7°145.5°
C2'C7C8C960.2°34.5°
C7C2'C3'C102.6°1.4°
C7C2'C1'C3'177.8°179.8°
C7C2'C1'C11179.1°179.6°
C7C2'C1'H1'0.8°0.6°
C7C2'C3'C13176.5°179.1°
CD1N2CA2HN2180.0°180.0°
N2CD1CG1CB1166.0°180.0°
N2CD1CG1OE1179.9°180.0°
N2CD1CG1HG1140.8°60.0°
N2CD1CG1HG1268.7°60.0°
CD1N2CA2CB2113.8°150.0°
CD1N2CA2HA25.0°30.0°
CA2N2CD1CG1179.4°180.0°
CA2N2CD1OE10.7°0.0°
N2CA2CB2HA2119.9°120.1°
N2CA2CB2SG261.7°60.0°
N2CA2CB2HB2163.6°59.9°
N2CA2CB2HB22173.1°180.0°
HN2N2CD1CG10.6°0.0°
HN2N2CD1OE1179.3°180.0°
HN2N2CA2CB266.2°30.0°
HN2N2CA2HA2175.0°150.0°
N3CA3HA31HA32116.3°119.9°
HN3N3CA3HA31180.0°120.1°
HN3N3CA3HA3270.6°120.0°
CA1CB1CG1HB11125.3°120.0°
CA1CB1CG1HB12125.3°120.0°
CA1CB1HB11HB12116.7°120.0°
CA1CB1CG1CD1177.0°180.0°
CA1CB1CG1HG1157.7°60.0°
CA1CB1CG1HG1251.8°59.9°
HA1CA1CB1CG146.9°60.0°
HA1CA1CB1HB1178.4°NaN°
HA1CA1CB1HB12172.2°60.0°
CG1CB1HB11HB12116.7°120.0°
CB1CG1CD1HG11125.2°119.9°
CB1CG1CD1HG12125.2°120.0°
CB1CG1HG11HG12116.6°119.9°
CB1CG1CD1OE113.9°0.0°
HB11CB1CG1CD151.7°60.0°
HB11CB1CG1HG11176.9°180.0°
HB11CB1CG1HG1273.6°60.1°
HB12CB1CG1CD157.7°60.0°
HB12CB1CG1HG1167.5°60.0°
HB12CB1CG1HG12177.0°179.9°
CD1CG1HG11HG12116.6°120.1°
HG11CG1CD1OE1139.1°120.0°
HG12CG1CD1OE1111.4°120.0°
CA2CB2SG2HB21125.3°119.9°
CA2CB2SG2HB22125.3°120.0°
CA2CB2HB21HB22115.9°120.0°
CA2CB2SG2C1085.4°180.0°
HA2CA2CB2SG258.2°60.1°
HA2CA2CB2HB21176.5°NaN°
HA2CA2CB2HB2267.0°60.0°
SG2CB2HB21HB22115.7°120.1°
CB2SG2C10C980.5°58.7°
CB2SG2C10C3'41.9°178.6°
CB2SG2C10H10160.5°59.9°
HB21CB2SG2C10149.3°60.1°
HB22CB2SG2C1039.9°59.9°
SG2C10C9C8139.9°70.4°
SG2C10C9O996.7°169.7°
SG2C10C9C3'121.6°120.7°
SG2C10C9H10119.8°118.7°
SG2C10C9H923.5°49.3°
SG2C10C3'H10119.8°118.7°
SG2C10C3'C2'114.9°95.6°
SG2C10C3'C1366.1°84.0°
O8C8C9O953.5°116.9°
O8C8C9C1068.8°123.3°
O8C8C9H9173.5°3.7°
C8C9O9C10125.3°119.1°
C8C9O9H9116.7°120.6°
C8C9C10H9116.4°119.6°
C8C9O9HO9180.0°60.9°
C8C9C10C3'18.3°50.3°
C8C9C10H10100.3°171.0°
O9C9C10H9120.2°120.4°
O9C9C10C3'141.7°69.7°
O9C9C10H1023.1°51.0°
C10C9O9HO954.7°180.0°
C9C10C3'H10118.9°120.6°
C9C10C3'C2'6.4°25.0°
C9C10C3'C13172.6°155.4°
H9C9O9HO963.3°59.7°
H9C9C10C3'98.2°169.9°
H9C9C10H10143.3°69.4°
C10C3'C2'C1'175.2°178.8°
C10C3'C2'C13179.1°179.6°
C10C3'C13C4'7.7°0.8°
C10C3'C13C12177.3°178.7°
H10C10C3'C2'125.3°145.7°
H10C10C3'C1353.7°34.8°
C2'C1'C11H1'179.9°179.9°
C1'C2'C3'C135.7°0.7°
C2'C1'C11C9A178.6°179.9°
C2'C1'C11C121.7°0.1°
C11C1'C2'C3'3.0°0.2°
C1'C11C9AC9'177.8°179.8°
C1'C11C9AC12179.7°180.0°
C1'C11C9AH9A2.2°0.1°
C1'C11C12C133.8°0.1°
C1'C11C12C17175.6°179.8°
H1'C1'C2'C3'177.0°179.7°
H1'C1'C11C9A1.5°0.1°
H1'C1'C11C12178.2°180.0°
C2'C3'C13C4'171.4°179.6°
C2'C3'C13C123.6°0.9°
C3'C13C4'C5'176.9°179.3°
C3'C13C4'C12175.0°179.5°
C3'C13C4'H4'3.0°0.6°
C3'C13C12C111.0°0.6°
C3'C13C12C17178.3°179.3°
C5'C4'C13H4'179.9°179.9°
C4'C5'C16H5'179.9°179.9°
C4'C5'C16C6'178.8°179.8°
C5'C4'C13C121.9°0.2°
C4'C5'C16C171.4°0.1°
C13C4'C5'C160.4°0.0°
C13C4'C5'H5'179.6°179.9°
C4'C13C12C11176.2°179.9°
C4'C13C12C173.2°0.2°
H4'C4'C5'C16179.7°179.9°
H4'C4'C5'H5'0.4°0.2°
H4'C4'C13C12178.0°180.0°
C5'C16C6'C7'179.0°180.0°
C5'C16C6'C17179.8°179.9°
C5'C16C6'H6'1.0°0.0°
C5'C16C17C120.1°0.1°
C5'C16C17C18179.5°179.9°
H5'C5'C16C6'1.2°0.3°
H5'C5'C16C17178.6°179.8°
C7'C6'C16H6'180.0°179.9°
C6'C7'C8'H7'180.0°179.9°
C6'C7'C8'C180.5°0.0°
C6'C7'C8'H8'179.5°180.0°
C7'C6'C16C171.2°0.1°
C16C6'C7'C8'0.6°0.0°
C16C6'C7'H7'179.5°180.0°
C6'C16C17C12179.9°179.8°
C6'C16C17C180.7°0.2°
H6'C6'C7'C8'179.4°179.9°
H6'C6'C7'H7'0.6°0.1°
H6'C6'C16C17178.8°180.0°
C7'C8'C18H8'180.0°180.0°
C7'C8'C18C9'179.5°180.0°
C7'C8'C18C171.0°0.1°
H7'C7'C8'C18179.4°180.0°
H7'C7'C8'H8'0.5°0.0°
C8'C18C9'C9A178.7°179.8°
C8'C18C9'C17179.5°179.9°
C8'C18C9'H9'1.3°0.2°
C8'C18C17C12179.0°179.8°
C8'C18C17C160.4°0.2°
H8'C8'C18C9'0.5°0.0°
H8'C8'C18C17179.0°179.9°
C9AC9'C18H9'180.0°179.9°
C9'C9AC11H9A180.0°179.9°
C9'C9AC11C121.9°0.2°
C9AC9'C18C171.8°0.1°
C18C9'C9AC111.1°0.1°
C18C9'C9AH9A178.9°180.0°
C9'C18C17C120.5°0.1°
C9'C18C17C16179.9°179.9°
H9'C9'C9AC11178.9°180.0°
H9'C9'C9AH9A1.1°0.1°
H9'C9'C18C17178.2°179.9°
C9AC11C12C13176.5°179.9°
C9AC11C12C174.2°0.2°
H9AC9AC11C12178.1°179.9°
C11C12C13C17179.3°179.9°
C11C12C17C16177.1°180.0°
C11C12C17C183.4°0.1°
C13C12C17C162.2°0.0°
C13C12C17C18177.2°180.0°
C12C17C16C18179.4°180.0°

221716

PDB entries from 2024-06-26

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