Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

GBE

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O1sing1.43Å1.43Å
C1C2sing1.53Å1.55Å
C1O5sing1.43Å1.43Å
O1CAJsing1.43Å1.44Å
C2O2sing1.43Å1.44Å
C2C3sing1.53Å1.53Å
C3O3sing1.43Å1.44Å
C3C4sing1.53Å1.53Å
C4O4sing1.43Å1.42Å
C4C5sing1.53Å1.54Å
C5O5sing1.43Å1.42Å
C5C6sing1.53Å1.53Å
C6O6sing1.43Å1.43Å
OAASBAsing1.52Å1.49Å
OABSBAdoub1.42Å1.48Å
OAGSBAdoub1.42Å1.48Å
CAHCAKsing1.53Å1.53Å
CAHCAQsing1.53Å1.53Å
CAJCALsing1.53Å1.53Å
CAKNAYsing1.47Å1.47Å
CALNAZsing1.47Å1.48Å
CAMCAOsing1.53Å1.53Å
CAMNAYsing1.47Å1.47Å
CANCAPsing1.53Å1.53Å
CANNAYsing1.47Å1.48Å
CAONAZsing1.47Å1.47Å
CAPNAZsing1.47Å1.48Å
CAQSBAsing1.81Å1.67Å
C1H1sing1.09Å1.10Å
C2H2sing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C3H3sing1.09Å1.10Å
O3HO3sing0.97Å0.95Å
C4H4sing1.09Å1.10Å
O4HO4sing0.97Å0.95Å
C5H5sing1.09Å1.10Å
C6H6sing1.09Å1.10Å
C6H6Asing1.09Å1.10Å
O6HO6sing0.97Å0.95Å
OAAHOAAsing0.97Å0.95Å
CAHHAHsing1.09Å1.10Å
CAHHAHAsing1.09Å1.10Å
CAJHAJsing1.09Å1.10Å
CAJHAJAsing1.09Å1.10Å
CAKHAKsing1.09Å1.10Å
CAKHAKAsing1.09Å1.10Å
CALHALsing1.09Å1.10Å
CALHALAsing1.09Å1.10Å
CAMHAMsing1.09Å1.10Å
CAMHAMAsing1.09Å1.10Å
CANHANsing1.09Å1.10Å
CANHANAsing1.09Å1.10Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
CAPHAPsing1.09Å1.10Å
CAPHAPAsing1.09Å1.10Å
CAQHAQsing1.09Å1.10Å
CAQHAQAsing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C1C2112.9°109.5°
O1C1O5101.5°109.5°
C1O1CAJ115.7°114.0°
O1C1H1114.8°109.5°
C2C1O5115.4°109.4°
C1C2O2115.7°109.5°
C1C2C3116.2°109.1°
C2C1H1100.7°109.5°
C1C2H2100.0°109.5°
C1O5C5114.9°114.1°
O5C1H1112.2°109.5°
O1CAJCAL114.4°109.5°
O1CAJHAJ107.9°109.5°
O1CAJHAJA107.9°109.5°
O2C2C3111.4°109.5°
O2C2H2106.2°109.5°
C2O2HO2109.5°114.0°
C2C3O3105.4°109.5°
C2C3C4107.6°109.0°
C3C2H2105.6°109.6°
C2C3H3113.9°109.6°
O3C3C4111.5°109.5°
O3C3H3110.2°109.5°
C3O3HO3109.5°114.0°
C3C4O4110.5°109.5°
C3C4C5110.5°109.2°
C4C3H3108.1°109.6°
C3C4H4109.5°109.5°
O4C4C5113.5°109.5°
O4C4H4106.3°109.6°
C4O4HO4109.5°114.0°
C4C5O5105.2°109.4°
C4C5C6118.8°109.5°
C5C4H4106.3°109.6°
C4C5H5105.2°109.5°
O5C5C6106.4°109.5°
O5C5H5117.8°109.5°
C5C6O6110.3°109.5°
C6C5H5104.1°109.5°
C5C6H6109.2°109.5°
C5C6H6A109.2°109.4°
O6C6H6109.2°109.5°
O6C6H6A109.2°109.6°
C6O6HO6109.5°114.0°
OAASBAOAB108.6°104.2°
OAASBAOAG109.5°104.3°
OAASBACAQ110.1°104.5°
SBAOAAHOAA109.5°114.1°
OABSBAOAG109.8°121.0°
OABSBACAQ110.0°110.5°
OAGSBACAQ108.8°110.6°
CAKCAHCAQ112.3°109.4°
CAHCAKNAY110.9°109.4°
CAKCAHHAH108.5°109.5°
CAKCAHHAHA108.6°109.5°
CAHCAKHAK109.0°109.5°
CAHCAKHAKA109.0°109.5°
CAHCAQSBA112.6°109.5°
CAQCAHHAH108.5°109.5°
CAQCAHHAHA108.5°109.5°
CAHCAQHAQ108.4°109.5°
CAHCAQHAQA108.4°109.5°
CAJCALNAZ115.3°109.5°
CALCAJHAJ107.9°109.5°
CALCAJHAJA107.8°109.5°
CAJCALHAL107.6°109.5°
CAJCALHALA107.6°109.5°
CAKNAYCAM108.2°111.0°
CAKNAYCAN112.5°111.0°
NAYCAKHAK109.0°109.5°
NAYCAKHAKA109.0°109.5°
CALNAZCAO105.4°111.0°
CALNAZCAP114.4°111.0°
NAZCALHAL107.6°109.5°
NAZCALHALA107.6°109.5°
CAOCAMNAY107.7°109.4°
CAMCAONAZ113.6°109.4°
CAOCAMHAM110.1°109.5°
CAOCAMHAMA110.1°109.5°
CAMCAOHAO108.1°109.5°
CAMCAOHAOA108.1°109.5°
CAMNAYCAN109.6°110.9°
NAYCAMHAM110.1°109.5°
NAYCAMHAMA110.1°109.4°
CAPCANNAY111.7°109.3°
CANCAPNAZ110.7°109.4°
CAPCANHAN108.8°109.5°
CAPCANHANA108.7°109.5°
CANCAPHAP109.1°109.5°
CANCAPHAPA109.1°109.5°
NAYCANHAN108.7°109.5°
NAYCANHANA108.7°109.5°
CAONAZCAP108.4°110.9°
NAZCAOHAO108.1°109.5°
NAZCAOHAOA108.1°109.5°
NAZCAPHAP109.1°109.5°
NAZCAPHAPA109.1°109.5°
SBACAQHAQ108.4°109.5°
SBACAQHAQA108.5°109.5°
H6C6H6A109.7°109.4°
HAHCAHHAHA110.4°109.5°
HAJCAJHAJA111.0°109.4°
HAKCAKHAKA109.9°109.5°
HALCALHALA111.3°109.4°
HAMCAMHAMA108.9°109.5°
HANCANHANA110.2°109.5°
HAOCAOHAOA110.8°109.5°
HAPCAPHAPA109.8°109.5°
HAQCAQHAQA110.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C1C2O5116.1°120.0°
O1C1C2H1122.8°120.1°
O1C1O5H1123.0°120.1°
O1C1C2O278.3°62.6°
O1C1C2C3148.3°177.6°
O1C1O5C5167.9°178.9°
C1O1CAJCAL95.6°180.0°
O1C1C2H235.3°57.6°
C1O1CAJHAJ144.4°59.9°
C1O1CAJHAJA24.5°60.0°
C2C1O5H1114.6°119.9°
C2C1O1CAJ155.8°175.0°
C1C2O2C3135.5°119.6°
C1C2O2H2110.0°120.1°
C1C2C3H2109.8°120.0°
C1C2C3O3157.3°176.9°
C1C2C3C438.2°57.0°
C2C1O5C545.5°61.2°
C1C2O2HO2180.0°60.0°
C1C2C3H381.7°63.0°
O5C1O1CAJ80.1°65.1°
O5C1C2O2165.6°177.5°
O5C1C2C332.2°57.6°
C1O5C5C462.8°61.2°
C1O5C5C6170.3°178.8°
O5C1C2H280.8°62.4°
C1O5C5H554.1°58.8°
O1CAJCALHAJ120.0°120.1°
O1CAJCALHAJA120.0°120.0°
O1CAJCALNAZ44.4°65.0°
CAJO1C1H141.2°55.0°
O1CAJHAJHAJA118.0°120.0°
O1CAJCALHAL164.4°175.0°
O1CAJCALHALA75.6°55.0°
O2C2C3H2114.9°120.2°
O2C2C3O367.4°63.3°
O2C2C3C4173.5°176.9°
O2C2C1H144.6°57.5°
O2C2C3H353.6°56.9°
C2C3O3C4116.5°119.6°
C2C3O3H3123.4°120.2°
C2C3C4H3123.5°120.0°
C2C3C4O4175.9°176.9°
C2C3C4C557.7°57.0°
C3C2C1H188.8°62.4°
C3C2O2HO244.5°179.7°
C2C3O3HO3180.0°60.0°
C2C3C4H459.1°63.0°
O3C3C4H3121.3°120.2°
O3C3C4O460.7°63.3°
O3C3C4C5172.8°176.8°
O3C3C2H247.5°56.9°
O3C3C4H456.1°56.9°
C3C4O4C5124.8°119.7°
C3C4O4H4118.7°120.1°
C3C4C5H4118.7°119.9°
C3C4C5O570.4°57.6°
C3C4C5C6170.7°177.6°
C4C3C2H271.6°63.0°
C4C3O3HO363.5°179.6°
C3C4O4HO4180.0°60.0°
C3C4C5H554.7°62.4°
O4C4C5H4116.5°120.2°
O4C4C5O5164.8°177.5°
O4C4C5C645.9°62.5°
O4C4C3H360.6°56.9°
O4C4C5H570.0°57.5°
C4C5O5C6126.9°120.0°
C4C5O5H5116.9°120.0°
C4C5C6H5116.6°120.1°
C4C5C6O676.8°175.0°
C5C4C3H365.9°63.0°
C5C4O4HO455.2°179.7°
C4C5C6H6163.2°55.0°
C4C5C6H6A43.2°64.9°
O5C5C6H5125.2°120.0°
O5C5C6O641.5°65.1°
C5O5C1H169.1°58.8°
O5C5C4H448.3°62.3°
O5C5C6H678.5°174.9°
O5C5C6H6A161.5°55.0°
C5C6O6H6120.0°120.0°
C5C6O6H6A120.0°120.0°
C6C5C4H470.6°57.7°
C5C6H6H6A119.6°119.9°
C5C6O6HO6180.0°179.9°
O6C6C5H5166.7°54.9°
O6C6H6H6A119.7°120.1°
OAASBAOABOAG119.7°116.7°
OAASBAOABCAQ120.6°111.7°
OAASBAOAGCAQ120.4°111.8°
OAASBACAQCAH57.8°180.0°
OAASBACAQHAQ177.8°60.0°
OAASBACAQHAQA62.2°60.0°
OABSBAOAGCAQ120.4°131.5°
OABSBACAQCAH61.9°68.4°
OABSBAOAAHOAA0.0°63.9°
OABSBACAQHAQ58.1°51.6°
OABSBACAQHAQA178.1°171.6°
OAGSBACAQCAH177.9°68.4°
OAGSBAOAAHOAA119.9°63.9°
OAGSBACAQHAQ62.1°171.6°
OAGSBACAQHAQA57.9°51.7°
CAKCAHCAQHAH120.0°120.0°
CAKCAHCAQHAHA120.0°120.0°
CAHCAKNAYHAK120.0°120.0°
CAHCAKNAYHAKA120.0°120.0°
CAHCAKNAYCAM68.9°170.0°
CAHCAKNAYCAN169.9°66.2°
CAKCAHCAQSBA176.3°180.0°
CAKCAHHAHHAHA118.9°120.0°
CAHCAKHAKHAKA119.4°120.0°
CAKCAHCAQHAQ63.7°60.0°
CAKCAHCAQHAQA56.3°60.0°
CAQCAHCAKNAY174.8°180.0°
CAHCAQSBAHAQ120.0°120.0°
CAHCAQSBAHAQA120.0°120.0°
CAQCAHHAHHAHA118.8°120.1°
CAQCAHCAKHAK54.8°60.0°
CAQCAHCAKHAKA65.2°60.1°
CAHCAQHAQHAQA118.7°120.0°
CAJCALNAZHAL120.0°120.1°
CAJCALNAZHALA120.0°120.0°
CAJCALNAZCAO167.7°170.0°
CAJCALNAZCAP73.3°66.2°
CALCAJHAJHAJA117.9°119.9°
CAJCALHALHALA117.6°120.0°
CAKNAYCAMCAO178.4°176.8°
CAKNAYCAMCAN122.9°123.9°
CAKNAYCANCAP179.5°176.8°
NAYCAKCAHHAH54.8°60.0°
NAYCAKCAHHAHA65.2°60.0°
NAYCAKHAKHAKA119.4°120.0°
CAKNAYCAMHAM58.4°56.9°
CAKNAYCAMHAMA61.6°63.2°
CAKNAYCANHAN59.4°63.2°
CAKNAYCANHANA60.5°56.9°
CALNAZCAOCAM178.8°176.8°
CALNAZCAPCAN171.7°176.8°
CALNAZCAOCAP123.0°123.9°
NAZCALCAJHAJ75.6°55.0°
NAZCALCAJHAJA164.5°175.0°
NAZCALHALHALA117.6°120.0°
CALNAZCAOHAO58.8°56.9°
CALNAZCAOHAOA61.2°63.2°
CALNAZCAPHAP51.7°63.2°
CALNAZCAPHAPA68.3°56.8°
CAOCAMNAYHAM120.0°120.0°
CAOCAMNAYHAMA120.0°120.0°
CAOCAMNAYCAN58.6°59.3°
CAMCAONAZHAO120.0°120.0°
CAMCAONAZHAOA120.0°120.0°
CAMCAONAZCAP58.2°59.3°
CAOCAMHAMHAMA120.7°120.1°
CAMCAOHAOHAOA118.3°120.1°
CAMNAYCANCAP59.1°59.3°
NAYCAMCAONAZ60.6°58.4°
CAMNAYCAKHAK171.1°70.0°
CAMNAYCAKHAKA51.1°50.0°
NAYCAMHAMHAMA120.7°120.0°
CAMNAYCANHAN61.0°60.7°
CAMNAYCANHANA179.1°179.3°
NAYCAMCAOHAO179.4°178.4°
NAYCAMCAOHAOA59.4°61.6°
CAPCANNAYHAN120.0°119.9°
CAPCANNAYHANA120.0°120.0°
CANCAPNAZCAO54.4°59.3°
CANCAPNAZHAP120.0°120.0°
CANCAPNAZHAPA120.0°120.0°
CAPCANHANHANA119.1°120.1°
CANCAPHAPHAPA119.5°120.0°
NAYCANCAPNAZ56.9°58.4°
CANNAYCAKHAK49.9°53.8°
CANNAYCAKHAKA70.1°173.8°
CANNAYCAMHAM178.7°179.3°
CANNAYCAMHAMA61.3°60.7°
NAYCANHANHANA119.0°120.1°
NAYCANCAPHAP63.1°61.6°
NAYCANCAPHAPA176.9°178.4°
CAONAZCALHAL72.3°70.0°
CAONAZCALHALA47.7°50.0°
NAZCAOCAMHAM179.4°178.3°
NAZCAOCAMHAMA59.4°61.5°
NAZCAOHAOHAOA118.3°120.0°
CAONAZCAPHAP65.6°60.7°
CAONAZCAPHAPA174.4°179.3°
CAPNAZCALHAL46.7°53.8°
CAPNAZCALHALA166.7°173.8°
NAZCAPCANHAN63.1°61.6°
NAZCAPCANHANA176.9°178.4°
CAPNAZCAOHAO178.2°179.3°
CAPNAZCAOHAOA61.8°60.7°
NAZCAPHAPHAPA119.5°120.0°
CAQSBAOAAHOAA120.6°180.0°
SBACAQCAHHAH56.3°60.0°
SBACAQCAHHAHA63.7°60.1°
SBACAQHAQHAQA118.7°120.0°
H1C1C2H2158.1°177.6°
H2C2O2HO270.1°60.1°
H2C2C3H3168.5°177.1°
H3C3O3HO356.6°60.2°
H3C3C4H4177.4°177.1°
H4C4O4HO461.3°60.1°
H4C4C5H5173.5°177.7°
H5C5C6H646.7°65.1°
H5C5C6H6A73.3°175.0°
H6C6O6HO660.0°60.1°
H6AC6O6HO660.0°59.9°
HAHCAHCAKHAK65.2°60.0°
HAHCAHCAKHAKA174.8°NaN°
HAHCAHCAQHAQ176.3°180.0°
HAHCAHCAQHAQA63.7°60.0°
HAHACAHCAKHAK174.8°180.0°
HAHACAHCAKHAKA54.8°60.0°
HAHACAHCAQHAQ56.3°60.0°
HAHACAHCAQHAQA176.3°180.0°
HAJCAJCALHAL44.4°65.0°
HAJCAJCALHALA164.4°175.0°
HAJACAJCALHAL75.5°54.9°
HAJACAJCALHALA44.5°65.0°
HAMCAMCAOHAO59.4°61.7°
HAMCAMCAOHAOA60.6°58.4°
HAMACAMCAOHAO60.6°58.5°
HAMACAMCAOHAOA179.4°178.5°
HANCANCAPHAP176.9°178.5°
HANCANCAPHAPA56.9°58.4°
HANACANCAPHAP56.9°58.4°
HANACANCAPHAPA63.1°61.6°

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon