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GBA

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N6C6sing1.38Å1.33Å
N1C6doub1.33Å1.34ÅAromatic
N1C2sing1.32Å1.40ÅAromatic
C6C5sing1.41Å1.34ÅAromatic
C2N3doub1.32Å1.40ÅAromatic
C5N7sing1.36Å1.33ÅAromatic
C5C4doub1.40Å1.35ÅAromatic
N7C8doub1.30Å1.32ÅAromatic
N3C4sing1.33Å1.36ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C8N9sing1.36Å1.33ÅAromatic
C8BR8sing1.89Å1.94Å
N9C1'sing1.46Å1.50Å
O5'C5'sing1.43Å1.45Å
O4'C1'sing1.44Å1.44Å
O4'C4'sing1.44Å1.45Å
C1'C2'sing1.55Å1.55Å
C5'C4'sing1.53Å1.54Å
C4'C3'sing1.54Å1.54Å
C2'C3'sing1.55Å1.51Å
C2'O2'sing1.43Å1.44Å
C3'O3'sing1.43Å1.44Å
O2'H1sing0.97Å0.95Å
C2'H2sing1.09Å1.10Å
C3'H3sing1.09Å1.10Å
O3'H4sing0.97Å0.95Å
C4'H5sing1.09Å1.10Å
C5'H6sing1.09Å1.10Å
C5'H7sing1.09Å1.10Å
O5'H8sing0.97Å0.95Å
C1'H9sing1.09Å1.10Å
C2H10sing1.08Å1.08Å
N6H11sing0.97Å1.00Å
N6H12sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N6C6N1120.5°120.8°
N6C6C5117.7°120.8°
C6N6H11109.5°120.0°
C6N6H12109.5°120.0°
C6N1C2120.5°121.2°
N1C6C5121.7°118.5°
N1C2N3116.8°122.4°
N1C2H10121.6°118.8°
C6C5N7132.0°134.7°
C6C5C4119.8°118.2°
C2N3C4120.1°120.6°
N3C2H10121.6°118.8°
N7C5C4108.2°107.2°
C5N7C8107.1°109.4°
C5C4N3121.1°119.1°
C5C4N9108.0°106.0°
N7C8N9109.9°110.0°
N7C8BR8124.4°125.0°
N3C4N9130.9°134.9°
C4N9C8106.8°107.4°
C4N9C1'123.7°126.3°
N9C8BR8125.7°125.0°
C8N9C1'129.4°126.3°
N9C1'O4'111.6°110.6°
N9C1'C2'113.4°110.6°
N9C1'H9108.8°110.7°
O5'C5'C4'109.9°109.5°
O5'C5'H6109.4°109.5°
O5'C5'H7109.4°109.5°
C5'O5'H8109.5°113.9°
C1'O4'C4'107.9°107.0°
O4'C1'C2'105.0°103.5°
O4'C1'H9109.6°110.6°
O4'C4'C5'107.7°110.0°
O4'C4'C3'107.9°107.3°
O4'C4'H5110.3°109.9°
C1'C2'C3'102.2°102.1°
C1'C2'O2'111.6°110.9°
C1'C2'H2109.7°110.9°
C2'C1'H9108.2°110.6°
C5'C4'C3'113.0°109.9°
C5'C4'H5109.0°109.8°
C4'C5'H6109.4°109.4°
C4'C5'H7109.4°109.5°
C4'C3'C2'104.2°104.2°
C4'C3'O3'109.0°110.5°
C4'C3'H3111.0°110.6°
C3'C4'H5109.0°109.9°
C3'C2'O2'111.4°110.9°
C2'C3'O3'108.2°110.5°
C3'C2'H2110.2°110.9°
C2'C3'H3111.5°110.5°
C2'O2'H1109.5°114.0°
O2'C2'H2111.3°110.8°
O3'C3'H3112.6°110.4°
C3'O3'H4109.5°114.0°
H6C5'H7109.5°109.4°
H11N6H12109.4°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N6C6N1C5175.9°179.9°
N6C6N1C2174.6°179.9°
N6C6C5N74.1°0.1°
N6C6C5C4177.1°179.9°
C6N6H11H12120.0°179.9°
C6N1C2N33.2°0.2°
N1C6C5N7179.9°180.0°
N1C6C5C41.1°0.0°
C6N1C2H10176.8°179.9°
N1C6N6H110.0°180.0°
N1C6N6H12120.0°0.1°
C2N1C6C51.3°0.0°
N1C2N3H10180.0°179.8°
N1C2N3C42.7°0.5°
C6C5N7C4178.9°180.0°
C6C5N7C8178.9°180.0°
C6C5C4N31.5°0.3°
C6C5C4N9180.0°180.0°
C5C6N6H11176.1°0.1°
C5C6N6H1264.0°180.0°
C2N3C4C50.5°0.5°
C2N3C4N9177.6°179.8°
N7C5C4N3179.4°179.8°
N7C5C4N91.0°0.0°
C5N7C8N90.9°0.0°
C5N7C8BR8177.8°180.0°
C4C5N7C80.0°0.0°
C5C4N3N9178.0°179.7°
C5C4N9C81.6°0.0°
C5C4N9C1'178.6°180.0°
N7C8N9C41.6°0.1°
N7C8N9BR8178.8°179.9°
N7C8N9C1'178.6°180.0°
N3C4N9C8179.8°179.7°
N3C4N9C1'0.4°0.2°
C4N3C2H10177.3°179.7°
C4N9C8C1'179.8°179.9°
C4N9C8BR8177.2°180.0°
C4N9C1'O4'118.2°136.4°
C4N9C1'C2'123.4°109.5°
C4N9C1'H92.9°13.5°
C8N9C1'O4'61.7°43.5°
C8N9C1'C2'56.7°70.6°
C8N9C1'H9177.2°166.5°
BR8C8N9C1'2.6°0.1°
N9C1'O4'C2'123.3°118.5°
N9C1'O4'H9120.6°123.0°
N9C1'O4'C4'152.8°158.6°
N9C1'C2'H9120.9°123.0°
N9C1'C2'C3'158.4°155.5°
N9C1'C2'O2'82.5°86.3°
N9C1'C2'H241.4°37.3°
O5'C5'C4'O4'51.8°67.1°
O5'C5'C4'H6120.0°120.0°
O5'C5'C4'H7120.1°120.0°
O5'C5'C4'C3'170.9°175.0°
O5'C5'C4'H567.8°54.0°
O5'C5'H6H7119.8°120.0°
O4'C1'C2'H9117.0°118.5°
C1'O4'C4'C5'133.3°146.0°
C1'O4'C4'C3'11.0°26.6°
O4'C1'C2'C3'36.3°37.0°
O4'C1'C2'O2'155.4°155.2°
O4'C1'C2'H280.7°81.2°
C1'O4'C4'H5107.9°92.9°
C4'O4'C1'C2'29.5°40.1°
O4'C4'C5'C3'119.1°117.9°
O4'C4'C5'H5119.6°121.1°
O4'C4'C3'H5119.7°119.5°
O4'C4'C3'C2'12.3°2.1°
O4'C4'C3'O3'103.0°120.7°
O4'C4'C3'H3132.4°116.7°
O4'C4'C5'H668.2°172.9°
O4'C4'C5'H7171.9°52.9°
C4'O4'C1'H986.6°78.4°
C1'C2'C3'C4'28.7°20.9°
C1'C2'C3'O2'119.3°118.2°
C1'C2'C3'H2116.6°118.2°
C1'C2'O2'H2123.0°123.6°
C1'C2'C3'O3'87.2°97.8°
C1'C2'O2'H1180.0°174.2°
C1'C2'C3'H3148.4°139.7°
C5'C4'C3'H5121.3°121.0°
C5'C4'C3'C2'106.7°121.6°
C5'C4'C3'O3'138.1°119.7°
C5'C4'C3'H313.5°2.8°
C4'C5'H6H7119.8°120.0°
C4'C5'O5'H8180.0°180.0°
C4'C3'C2'O3'115.9°118.7°
C4'C3'C2'H3119.8°118.8°
C4'C3'C2'O2'148.0°139.1°
C4'C3'O3'H3123.7°122.6°
C4'C3'C2'H288.0°97.3°
C4'C3'O3'H4180.0°65.2°
C3'C4'C5'H650.8°55.0°
C3'C4'C5'H769.0°64.9°
C3'C2'O2'H2123.5°123.7°
C2'C3'O3'H3123.7°122.6°
C3'C2'O2'H166.5°61.5°
C2'C3'O3'H467.3°180.0°
C2'C3'C4'H5132.0°117.4°
C3'C2'C1'H980.8°81.4°
O2'C2'C3'O3'32.1°20.4°
O2'C2'C3'H392.3°102.1°
O2'C2'C1'H938.4°36.8°
O3'C3'C2'H2156.2°144.0°
O3'C3'C4'H516.7°1.3°
H1O2'C2'H257.0°62.2°
H2C2'C3'H331.8°21.5°
H2C2'C1'H9162.3°160.3°
H3C3'O3'H456.3°57.4°
H3C3'C4'H5107.9°123.8°
H5C4'C5'H6172.2°66.0°
H5C4'C5'H752.3°174.0°
H6C5'O5'H859.9°60.0°
H7C5'O5'H860.0°60.0°

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PDB entries from 2024-08-07

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