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GAG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O20C2sing1.36Å1.29Å
O20H20sing0.97Å0.95Å
C2C1sing1.47Å1.48ÅAromatic
C2N3doub1.30Å1.34ÅAromatic
C1COOsing1.47Å1.48Å
C1C5doub1.37Å1.39ÅAromatic
COOO12sing1.35Å1.22Å
COOO11doub1.22Å1.22Å
O12H12sing0.97Å0.95Å
C5O4sing1.33Å1.38ÅAromatic
C5H5sing1.08Å1.10Å
O4N3sing1.21Å1.39ÅAromatic
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2O20H20126.0°106.8°
O20C2C1126.0°127.4°
O20C2N3125.7°127.4°
C1C2N3108.3°105.2°
C2C1COO127.6°128.7°
C2C1C5105.2°102.8°
C2N3O4108.5°112.2°
COOC1C5127.2°128.5°
C1COOO12122.1°120.1°
C1COOO11116.3°119.9°
C1C5O4108.4°106.4°
C1C5H5126.0°126.8°
O12COOO11121.6°120.0°
COOO12H12122.1°120.0°
O4C5H5125.6°126.8°
C5O4N3109.6°113.3°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O20C2C1N3180.0°179.5°
O20C2C1COO0.3°0.3°
O20C2C1C5179.8°179.9°
O20C2N3O4179.2°179.9°
H20O20C2C1179.9°90.5°
H20O20C2N30.0°90.0°
C2C1COOC5179.9°179.8°
C2C1COOO1213.7°179.7°
C2C1COOO11167.0°0.2°
C2C1C5O41.1°0.2°
C2C1C5H5178.9°179.7°
C1C2N3O40.9°0.4°
N3C2C1COO179.8°179.8°
N3C2C1C50.1°0.3°
C2N3O4C51.6°0.3°
C1COOO12O11179.3°179.9°
C1COOO12H12179.9°180.0°
COOC1C5O4178.8°180.0°
COOC1C5H51.2°0.1°
C5C1COOO12166.4°0.1°
C5C1COOO1112.9°180.0°
C1C5O4H5180.0°179.9°
C1C5O4N31.7°0.1°
O11COOO12H120.7°0.1°
H5C5O4N3178.3°180.0°

223532

PDB entries from 2024-08-07

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