G8M
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
O | C | doub | 1.21Å | 1.25Å | |
OXT | C | sing | 1.34Å | 1.24Å | |
C | CA | sing | 1.51Å | 1.55Å | |
CA | N | sing | 1.47Å | 1.48Å | |
CA | CB | sing | 1.53Å | 1.55Å | |
CB | CG | sing | 1.54Å | 1.55Å | |
CB | C6 | sing | 1.54Å | 1.54Å | |
CG | CD | sing | 1.51Å | 1.54Å | |
CG | C7 | sing | 1.54Å | 1.54Å | |
OE1 | CD | doub | 1.21Å | 1.25Å | |
C6 | C7 | sing | 1.54Å | 1.54Å | |
CD | OE2 | sing | 1.34Å | 1.25Å | |
OE2 | HE2 | sing | 0.97Å | 0.95Å | |
CG | HG2 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.97Å | 0.95Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
N | H1 | sing | 1.01Å | 1.00Å | |
CB | HB2 | sing | 1.09Å | 1.10Å | |
C6 | H9 | sing | 1.09Å | 1.10Å | |
C6 | H10 | sing | 1.09Å | 1.10Å | |
C7 | H11 | sing | 1.09Å | 1.10Å | |
C7 | H12 | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O | C | OXT | 120.8° | 120.0° |
O | C | CA | 119.4° | 120.0° |
OXT | C | CA | 119.8° | 120.0° |
C | OXT | HXT | 109.5° | 116.9° |
C | CA | N | 108.6° | 109.4° |
C | CA | CB | 111.9° | 109.5° |
C | CA | HA | 107.6° | 109.4° |
N | CA | CB | 112.6° | 109.5° |
N | CA | HA | 108.4° | 109.5° |
CA | N | H2 | 109.5° | 111.0° |
CA | N | H1 | 109.4° | 111.0° |
CA | CB | CG | 119.2° | 113.6° |
CA | CB | C6 | 120.7° | 113.7° |
CB | CA | HA | 107.5° | 109.5° |
CA | CB | HB2 | 108.8° | 112.9° |
CG | CB | C6 | 88.6° | 87.1° |
CB | CG | CD | 113.3° | 113.6° |
CB | CG | C7 | 88.7° | 87.0° |
CB | CG | HG2 | 113.3° | 113.7° |
CG | CB | HB2 | 108.9° | 113.6° |
CB | C6 | C7 | 89.2° | 87.1° |
C6 | CB | HB2 | 109.0° | 113.7° |
CB | C6 | H9 | 114.3° | 113.6° |
CB | C6 | H10 | 114.3° | 113.6° |
CD | CG | C7 | 112.6° | 113.6° |
CG | CD | OE1 | 118.6° | 120.0° |
CG | CD | OE2 | 120.0° | 120.0° |
CD | CG | HG2 | 113.4° | 112.9° |
CG | C7 | C6 | 88.9° | 87.1° |
C7 | CG | HG2 | 113.4° | 113.6° |
CG | C7 | H11 | 114.4° | 113.6° |
CG | C7 | H12 | 114.4° | 113.6° |
OE1 | CD | OE2 | 121.4° | 120.0° |
C7 | C6 | H9 | 114.3° | 113.6° |
C7 | C6 | H10 | 114.3° | 113.7° |
C6 | C7 | H11 | 114.3° | 113.6° |
C6 | C7 | H12 | 114.4° | 113.6° |
CD | OE2 | HE2 | 109.5° | 117.0° |
H2 | N | H1 | 109.5° | 111.0° |
H9 | C6 | H10 | 109.4° | 112.9° |
H11 | C7 | H12 | 109.4° | 113.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O | C | OXT | CA | 180.0° | 179.9° |
O | C | CA | N | 5.0° | 20.1° |
O | C | CA | CB | 120.0° | 99.9° |
O | C | OXT | HXT | 0.0° | 0.1° |
O | C | CA | HA | 122.2° | 140.0° |
OXT | C | CA | N | 175.0° | 160.0° |
OXT | C | CA | CB | 60.0° | 80.0° |
OXT | C | CA | HA | 57.8° | 40.1° |
C | CA | N | CB | 124.6° | 120.0° |
C | CA | N | HA | 116.6° | 119.9° |
C | CA | CB | HA | 117.9° | 120.0° |
C | CA | CB | CG | 88.5° | 173.8° |
C | CA | CB | C6 | 164.2° | 88.7° |
CA | C | OXT | HXT | 180.0° | 180.0° |
C | CA | N | H2 | 180.0° | 63.9° |
C | CA | N | H1 | 60.0° | 60.0° |
C | CA | CB | HB2 | 37.1° | 42.7° |
N | CA | CB | HA | 119.4° | 120.0° |
N | CA | CB | CG | 148.8° | 66.2° |
N | CA | CB | C6 | 41.4° | 31.3° |
CA | N | H2 | H1 | 120.0° | 124.0° |
N | CA | CB | HB2 | 85.6° | 162.6° |
CA | CB | CG | C6 | 124.8° | 114.6° |
CA | CB | CG | HB2 | 125.6° | 130.8° |
CA | CB | C6 | HB2 | 127.0° | 130.9° |
CA | CB | CG | CD | 27.0° | 25.4° |
CA | CB | CG | C7 | 141.1° | 89.1° |
CA | CB | C6 | C7 | 139.8° | 89.1° |
CA | CB | CG | HG2 | 104.0° | 156.3° |
CB | CA | N | H2 | 55.4° | 176.1° |
CB | CA | N | H1 | 175.4° | 60.0° |
CA | CB | C6 | H9 | 23.4° | 25.5° |
CA | CB | C6 | H10 | 103.8° | 156.3° |
CG | CB | C6 | HB2 | 109.5° | 114.5° |
CB | CG | CD | C7 | 98.7° | 97.4° |
CB | CG | CD | HG2 | 130.9° | 131.3° |
CB | CG | C7 | HG2 | 114.9° | 114.6° |
CB | CG | CD | OE1 | 108.6° | 75.1° |
CG | CB | C6 | C7 | 16.3° | 25.5° |
CB | CG | CD | OE2 | 70.7° | 105.2° |
CG | CB | CA | HA | 29.4° | 53.8° |
CG | CB | C6 | H9 | 100.1° | 140.0° |
CG | CB | C6 | H10 | 132.7° | 89.1° |
CB | CG | C7 | H11 | 100.1° | 140.0° |
CB | CG | C7 | H12 | 132.7° | 89.1° |
C6 | CB | CG | CD | 97.8° | 140.0° |
CB | C6 | C7 | H9 | 116.4° | 114.5° |
CB | C6 | C7 | H10 | 116.4° | 114.5° |
C6 | CB | CG | HG2 | 131.2° | 89.1° |
C6 | CB | CA | HA | 77.9° | 151.3° |
CB | C6 | H9 | H10 | 129.6° | 131.1° |
CB | C6 | C7 | H11 | 100.0° | 139.9° |
CB | C6 | C7 | H12 | 132.7° | 89.1° |
CD | CG | C7 | HG2 | 130.4° | 130.9° |
CG | CD | OE1 | OE2 | 179.2° | 179.7° |
CD | CG | C7 | C6 | 98.4° | 140.0° |
CG | CD | OE2 | HE2 | 179.2° | 179.7° |
CD | CG | CB | HB2 | 152.5° | 105.4° |
CD | CG | C7 | H11 | 145.2° | 105.5° |
CD | CG | C7 | H12 | 17.9° | 25.4° |
C7 | CG | CD | OE1 | 152.7° | 22.4° |
CG | C7 | C6 | H11 | 116.4° | 114.5° |
CG | C7 | C6 | H12 | 116.4° | 114.5° |
C7 | CG | CD | OE2 | 28.0° | 157.3° |
C7 | CG | CB | HB2 | 93.4° | 140.1° |
CG | C7 | C6 | H9 | 100.0° | 140.0° |
CG | C7 | C6 | H10 | 132.8° | 89.1° |
CG | C7 | H11 | H12 | 129.8° | 131.2° |
OE1 | CD | OE2 | HE2 | 0.0° | 0.0° |
OE1 | CD | CG | HG2 | 22.3° | 153.6° |
C6 | C7 | CG | HG2 | 131.2° | 89.2° |
C7 | C6 | CB | HB2 | 93.2° | 140.0° |
C7 | C6 | H9 | H10 | 129.6° | 131.4° |
C6 | C7 | H11 | H12 | 129.8° | 131.3° |
OE2 | CD | CG | HG2 | 158.4° | 26.1° |
HG2 | CG | CB | HB2 | 21.6° | 25.5° |
HG2 | CG | C7 | H11 | 14.8° | 25.4° |
HG2 | CG | C7 | H12 | 112.5° | 156.3° |
HA | CA | N | H2 | 63.4° | 56.0° |
HA | CA | N | H1 | 56.6° | 180.0° |
HA | CA | CB | HB2 | 155.0° | 77.4° |
HB2 | CB | C6 | H9 | 150.4° | 105.5° |
HB2 | CB | C6 | H10 | 23.2° | 25.4° |
H9 | C6 | C7 | H11 | 143.6° | 105.5° |
H9 | C6 | C7 | H12 | 16.3° | 25.4° |
H10 | C6 | C7 | H11 | 16.4° | 25.4° |
H10 | C6 | C7 | H12 | 110.8° | 156.4° |