G7M
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP3 | P | sing | 1.61Å | 1.53Å | |
| OP3 | HOP3 | sing | 0.97Å | 0.95Å | |
| P | OP1 | doub | 1.48Å | 1.48Å | |
| P | OP2 | sing | 1.61Å | 1.48Å | |
| P | O5' | sing | 1.61Å | 1.60Å | |
| OP2 | HOP2 | sing | 0.97Å | 0.95Å | |
| O5' | C5' | sing | 1.43Å | 1.44Å | |
| C5' | C4' | sing | 1.53Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.42Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.55Å | 1.52Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| C2' | C1' | sing | 1.55Å | 1.53Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| N9 | C8 | sing | 1.36Å | 1.38Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N7 | CN7 | sing | 1.47Å | 1.48Å | |
| N7 | C5 | sing | 1.35Å | 1.39Å | Aromatic |
| CN7 | HN71 | sing | 1.09Å | 1.10Å | |
| CN7 | HN72 | sing | 1.09Å | 1.10Å | |
| CN7 | HN73 | sing | 1.09Å | 1.10Å | |
| C5 | C6 | sing | 1.41Å | 1.42Å | |
| C5 | C4 | doub | 1.40Å | 1.37Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.35Å | 1.40Å | |
| N1 | C2 | sing | 1.36Å | 1.39Å | |
| N1 | H1 | sing | 0.97Å | 1.00Å | |
| C2 | N2 | sing | 1.37Å | 1.33Å | |
| C2 | N3 | doub | 1.31Å | 1.32Å | |
| N2 | H21 | sing | 0.97Å | 1.00Å | |
| N2 | H22 | sing | 0.97Å | 1.00Å | |
| N3 | C4 | sing | 1.34Å | 1.36Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| P | OP3 | HOP3 | 109.5° | 114.0° |
| OP3 | P | OP1 | 109.6° | 109.5° |
| OP3 | P | OP2 | 113.4° | 109.5° |
| OP3 | P | O5' | 102.9° | 109.5° |
| OP1 | P | OP2 | 117.4° | 109.4° |
| OP1 | P | O5' | 103.2° | 109.4° |
| OP2 | P | O5' | 108.7° | 109.5° |
| P | OP2 | HOP2 | 109.5° | 114.0° |
| P | O5' | C5' | 118.5° | 123.1° |
| O5' | C5' | C4' | 108.8° | 109.5° |
| O5' | C5' | H5' | 109.7° | 109.4° |
| O5' | C5' | H5'' | 109.7° | 109.5° |
| C4' | C5' | H5' | 109.6° | 109.5° |
| C4' | C5' | H5'' | 109.6° | 109.5° |
| C5' | C4' | O4' | 107.4° | 109.9° |
| C5' | C4' | C3' | 115.6° | 109.9° |
| C5' | C4' | H4' | 109.2° | 109.9° |
| H5' | C5' | H5'' | 109.5° | 109.4° |
| O4' | C4' | C3' | 104.9° | 107.3° |
| O4' | C4' | H4' | 110.2° | 109.9° |
| C4' | O4' | C1' | 109.8° | 107.0° |
| C3' | C4' | H4' | 109.4° | 110.0° |
| C4' | C3' | O3' | 111.7° | 110.4° |
| C4' | C3' | C2' | 102.1° | 104.2° |
| C4' | C3' | H3' | 108.9° | 110.5° |
| O4' | C1' | C2' | 106.7° | 103.5° |
| O4' | C1' | N9 | 106.6° | 110.7° |
| O4' | C1' | H1' | 110.0° | 110.7° |
| O3' | C3' | C2' | 114.5° | 110.5° |
| O3' | C3' | H3' | 110.3° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 113.9° |
| C2' | C3' | H3' | 108.9° | 110.6° |
| C3' | C2' | O2' | 111.4° | 110.9° |
| C3' | C2' | C1' | 102.1° | 102.1° |
| C3' | C2' | H2' | 109.1° | 110.9° |
| O2' | C2' | C1' | 114.4° | 110.9° |
| O2' | C2' | H2' | 110.6° | 110.8° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| C1' | C2' | H2' | 108.9° | 111.0° |
| C2' | C1' | N9 | 115.7° | 110.6° |
| C2' | C1' | H1' | 108.5° | 110.6° |
| N9 | C1' | H1' | 109.2° | 110.7° |
| C1' | N9 | C8 | 128.9° | 126.3° |
| C1' | N9 | C4 | 126.0° | 126.3° |
| C8 | N9 | C4 | 105.0° | 107.5° |
| N9 | C8 | N7 | 113.9° | 109.8° |
| N9 | C8 | H8 | 123.0° | 125.1° |
| N9 | C4 | C5 | 106.5° | 106.1° |
| N9 | C4 | N3 | 124.6° | 134.2° |
| N7 | C8 | H8 | 123.0° | 125.1° |
| C8 | N7 | CN7 | 127.8° | 125.3° |
| C8 | N7 | C5 | 103.7° | 109.3° |
| CN7 | N7 | C5 | 127.9° | 125.4° |
| N7 | CN7 | HN71 | 109.5° | 109.4° |
| N7 | CN7 | HN72 | 109.5° | 109.5° |
| N7 | CN7 | HN73 | 109.5° | 109.5° |
| N7 | C5 | C6 | 129.9° | 134.1° |
| N7 | C5 | C4 | 110.8° | 107.3° |
| HN71 | CN7 | HN72 | 109.5° | 109.5° |
| HN71 | CN7 | HN73 | 109.4° | 109.5° |
| HN72 | CN7 | HN73 | 109.5° | 109.5° |
| C6 | C5 | C4 | 119.3° | 118.6° |
| C5 | C6 | O6 | 129.0° | 120.9° |
| C5 | C6 | N1 | 111.1° | 118.4° |
| C5 | C4 | N3 | 128.9° | 119.7° |
| O6 | C6 | N1 | 119.9° | 120.8° |
| C6 | N1 | C2 | 125.0° | 120.3° |
| C6 | N1 | H1 | 117.5° | 119.9° |
| C2 | N1 | H1 | 117.5° | 119.8° |
| N1 | C2 | N2 | 115.1° | 119.0° |
| N1 | C2 | N3 | 123.9° | 121.9° |
| N2 | C2 | N3 | 121.0° | 119.1° |
| C2 | N2 | H21 | 120.0° | 120.1° |
| C2 | N2 | H22 | 120.0° | 120.0° |
| C2 | N3 | C4 | 111.9° | 121.2° |
| H21 | N2 | H22 | 120.0° | 119.9° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | OP1 | OP2 | 131.4° | 120.0° |
| OP3 | P | OP1 | O5' | 109.1° | 120.0° |
| OP3 | P | OP2 | O5' | 113.8° | 120.0° |
| OP3 | P | OP2 | HOP2 | 129.6° | 60.0° |
| OP3 | P | O5' | C5' | 58.1° | 175.0° |
| HOP3 | OP3 | P | OP1 | 0.0° | 60.1° |
| HOP3 | OP3 | P | OP2 | 133.4° | 59.9° |
| HOP3 | OP3 | P | O5' | 109.4° | 180.0° |
| OP1 | P | OP2 | O5' | 116.6° | 119.9° |
| OP1 | P | OP2 | HOP2 | 0.0° | 179.9° |
| OP1 | P | O5' | C5' | 172.2° | 55.0° |
| OP2 | P | O5' | C5' | 62.4° | 65.0° |
| O5' | P | OP2 | HOP2 | 116.6° | 60.0° |
| P | O5' | C5' | C4' | 171.5° | 180.0° |
| P | O5' | C5' | H5' | 51.6° | 60.0° |
| P | O5' | C5' | H5'' | 68.6° | 59.9° |
| O5' | C5' | C4' | H5' | 119.9° | 120.0° |
| O5' | C5' | C4' | H5'' | 119.9° | 120.0° |
| O5' | C5' | H5' | H5'' | 120.3° | 119.9° |
| O5' | C5' | C4' | O4' | 54.6° | 66.5° |
| O5' | C5' | C4' | C3' | 62.1° | 175.7° |
| O5' | C5' | C4' | H4' | 174.1° | 54.6° |
| C4' | C5' | H5' | H5'' | 120.3° | 120.0° |
| C5' | C4' | O4' | C3' | 123.5° | 119.4° |
| C5' | C4' | O4' | H4' | 118.9° | 121.1° |
| C5' | C4' | C3' | H4' | 123.7° | 121.1° |
| C5' | C4' | O4' | C1' | 142.4° | 145.9° |
| C5' | C4' | C3' | O3' | 84.3° | 119.9° |
| C5' | C4' | C3' | C2' | 152.9° | 121.4° |
| C5' | C4' | C3' | H3' | 37.8° | 2.6° |
| H5' | C5' | C4' | O4' | 174.5° | 53.6° |
| H5' | C5' | C4' | C3' | 57.8° | 64.2° |
| H5' | C5' | C4' | H4' | 66.0° | 174.6° |
| H5'' | C5' | C4' | O4' | 65.3° | 173.5° |
| H5'' | C5' | C4' | C3' | 178.0° | 55.7° |
| H5'' | C5' | C4' | H4' | 54.2° | 65.4° |
| O4' | C4' | C3' | H4' | 118.2° | 119.5° |
| O4' | C4' | C3' | O3' | 157.6° | 120.7° |
| O4' | C4' | C3' | C2' | 34.8° | 2.0° |
| O4' | C4' | C3' | H3' | 80.3° | 116.8° |
| C4' | O4' | C1' | C2' | 4.9° | 40.1° |
| C4' | O4' | C1' | N9 | 119.3° | 158.5° |
| C4' | O4' | C1' | H1' | 122.4° | 78.4° |
| C3' | C4' | O4' | C1' | 18.9° | 26.5° |
| C4' | C3' | O3' | C2' | 115.5° | 114.8° |
| C4' | C3' | O3' | H3' | 121.3° | 122.5° |
| C4' | C3' | C2' | H3' | 115.1° | 118.7° |
| C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C4' | C3' | C2' | O2' | 85.8° | 139.1° |
| C4' | C3' | C2' | C1' | 36.7° | 20.9° |
| C4' | C3' | C2' | H2' | 151.8° | 97.4° |
| H4' | C4' | O4' | C1' | 98.7° | 93.0° |
| H4' | C4' | C3' | O3' | 39.5° | 1.2° |
| H4' | C4' | C3' | C2' | 83.4° | 117.5° |
| H4' | C4' | C3' | H3' | 161.5° | 123.7° |
| O4' | C1' | C2' | C3' | 26.4° | 37.0° |
| O4' | C1' | C2' | O2' | 94.0° | 155.2° |
| O4' | C1' | C2' | N9 | 118.4° | 118.5° |
| O4' | C1' | C2' | H1' | 118.5° | 118.5° |
| O4' | C1' | C2' | H2' | 141.7° | 81.2° |
| O4' | C1' | N9 | H1' | 118.8° | 123.0° |
| O4' | C1' | N9 | C8 | 46.4° | 23.5° |
| O4' | C1' | N9 | C4 | 133.2° | 156.7° |
| O3' | C3' | C2' | H3' | 124.0° | 122.7° |
| O3' | C3' | C2' | O2' | 35.1° | 20.4° |
| O3' | C3' | C2' | C1' | 157.6° | 97.8° |
| O3' | C3' | C2' | H2' | 87.3° | 144.0° |
| C2' | C3' | O3' | HO3' | 64.5° | 65.2° |
| C3' | C2' | O2' | C1' | 115.1° | 112.7° |
| C3' | C2' | O2' | H2' | 121.5° | 123.6° |
| C3' | C2' | C1' | H2' | 115.3° | 118.2° |
| C3' | C2' | O2' | HO2' | 180.0° | 61.5° |
| C3' | C2' | C1' | N9 | 91.9° | 155.6° |
| C3' | C2' | C1' | H1' | 144.9° | 81.5° |
| H3' | C3' | O3' | HO3' | 58.7° | 57.5° |
| H3' | C3' | C2' | O2' | 159.1° | 102.3° |
| H3' | C3' | C2' | C1' | 78.4° | 139.6° |
| H3' | C3' | C2' | H2' | 36.7° | 21.3° |
| O2' | C2' | C1' | H2' | 124.3° | 123.7° |
| O2' | C2' | C1' | N9 | 147.7° | 86.3° |
| O2' | C2' | C1' | H1' | 24.5° | 36.7° |
| C1' | C2' | O2' | HO2' | 64.9° | 174.2° |
| C2' | C1' | N9 | H1' | 122.8° | 122.9° |
| C2' | C1' | N9 | C8 | 72.0° | 90.5° |
| C2' | C1' | N9 | C4 | 108.4° | 89.2° |
| H2' | C2' | O2' | HO2' | 58.5° | 62.1° |
| H2' | C2' | C1' | N9 | 23.4° | 37.4° |
| H2' | C2' | C1' | H1' | 99.8° | 160.3° |
| C1' | N9 | C8 | C4 | 179.7° | 179.8° |
| C1' | N9 | C8 | N7 | 179.1° | 180.0° |
| C1' | N9 | C8 | H8 | 0.9° | 0.0° |
| C1' | N9 | C4 | C5 | 178.9° | 179.8° |
| C1' | N9 | C4 | N3 | 1.2° | 0.6° |
| H1' | C1' | N9 | C8 | 165.2° | 146.6° |
| H1' | C1' | N9 | C4 | 14.4° | 33.6° |
| N9 | C8 | N7 | H8 | 180.0° | 179.9° |
| N9 | C8 | N7 | CN7 | 172.0° | 180.0° |
| N9 | C8 | N7 | C5 | 0.1° | 0.0° |
| C8 | N9 | C4 | C5 | 0.8° | 0.4° |
| C8 | N9 | C4 | N3 | 179.1° | 179.6° |
| C4 | N9 | C8 | N7 | 0.6° | 0.2° |
| C4 | N9 | C8 | H8 | 179.4° | 179.8° |
| N9 | C4 | C5 | N7 | 0.7° | 0.4° |
| N9 | C4 | C5 | C6 | 179.3° | 179.9° |
| N9 | C4 | C5 | N3 | 179.9° | 179.4° |
| N9 | C4 | N3 | C2 | 179.6° | 179.7° |
| C8 | N7 | CN7 | C5 | 170.3° | 180.0° |
| C8 | N7 | CN7 | HN71 | 180.0° | 90.0° |
| C8 | N7 | CN7 | HN72 | 60.0° | 150.1° |
| C8 | N7 | CN7 | HN73 | 60.0° | 30.0° |
| C8 | N7 | C5 | C6 | 179.6° | 179.9° |
| C8 | N7 | C5 | C4 | 0.4° | 0.2° |
| H8 | C8 | N7 | CN7 | 8.0° | 0.1° |
| H8 | C8 | N7 | C5 | 179.9° | 179.9° |
| N7 | CN7 | HN71 | HN72 | 120.0° | 120.0° |
| N7 | CN7 | HN71 | HN73 | 120.0° | 120.0° |
| N7 | CN7 | HN72 | HN73 | 120.0° | 120.0° |
| CN7 | N7 | C5 | C6 | 7.5° | 0.1° |
| CN7 | N7 | C5 | C4 | 172.5° | 179.8° |
| C5 | N7 | CN7 | HN71 | 9.7° | 90.0° |
| C5 | N7 | CN7 | HN72 | 110.3° | 30.0° |
| C5 | N7 | CN7 | HN73 | 129.7° | 150.0° |
| N7 | C5 | C6 | C4 | 180.0° | 179.7° |
| N7 | C5 | C6 | O6 | 0.6° | 0.1° |
| N7 | C5 | C6 | N1 | 179.5° | 179.9° |
| N7 | C5 | C4 | N3 | 179.1° | 179.7° |
| HN71 | CN7 | HN72 | HN73 | 120.0° | 120.0° |
| C5 | C6 | O6 | N1 | 179.9° | 180.0° |
| C5 | C6 | N1 | C2 | 0.0° | 0.0° |
| C5 | C6 | N1 | H1 | 179.9° | 179.9° |
| C6 | C5 | C4 | N3 | 0.9° | 0.5° |
| C4 | C5 | C6 | O6 | 179.5° | 179.7° |
| C4 | C5 | C6 | N1 | 0.5° | 0.3° |
| C5 | C4 | N3 | C2 | 0.6° | 0.5° |
| O6 | C6 | N1 | C2 | 180.0° | 180.0° |
| O6 | C6 | N1 | H1 | 0.0° | 0.1° |
| C6 | N1 | C2 | H1 | 180.0° | 179.9° |
| C6 | N1 | C2 | N2 | 179.7° | 180.0° |
| C6 | N1 | C2 | N3 | 0.3° | 0.1° |
| N1 | C2 | N2 | N3 | 180.0° | 179.9° |
| N1 | C2 | N2 | H21 | 180.0° | 0.1° |
| N1 | C2 | N2 | H22 | 0.0° | 180.0° |
| N1 | C2 | N3 | C4 | 0.0° | 0.2° |
| H1 | N1 | C2 | N2 | 0.3° | 0.1° |
| H1 | N1 | C2 | N3 | 179.7° | 180.0° |
| C2 | N2 | H21 | H22 | 180.0° | 180.0° |
| N2 | C2 | N3 | C4 | 180.0° | 179.7° |
| N3 | C2 | N2 | H21 | 0.0° | 180.0° |
| N3 | C2 | N2 | H22 | 180.0° | 0.1° |
