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Obsolete: G42

G42 was replaced with 8OG on
Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O3PPsing1.61Å1.48Å
O3PH3Psing0.97Å0.95Å
PO1Pdoub1.48Å1.46Å
PO2Psing1.61Å1.62Å
PO5'sing1.61Å1.56Å
O2PH2Psing0.97Å0.95Å
O5'C5'sing1.43Å1.44Å
C5'C4'sing1.53Å1.57Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.12Å
C4'O4'sing1.44Å1.46Å
C4'C3'sing1.55Å1.55Å
C4'H4'sing1.09Å1.12Å
O4'C1'sing1.44Å1.45Å
C3'O3'sing1.43Å1.40Å
C3'C2'sing1.55Å1.52Å
C3'H3'sing1.09Å1.12Å
O3'HAsing0.97Å0.95Å
C2'C1'sing1.54Å1.49Å
C2'H2'1sing1.09Å1.12Å
C2'H2'2sing1.09Å1.11Å
C1'N9sing1.46Å1.43Å
C1'H1'sing1.09Å1.12Å
N9C8sing1.35Å1.40Å
N9C4sing1.38Å1.35Å
C8N7sing1.35Å1.34Å
C8O8doub1.22Å1.24Å
N7C5sing1.40Å1.38Å
N7H7sing0.97Å1.02Å
C5C6sing1.40Å1.44Å
C5C4doub1.39Å1.36Å
C6O6doub1.22Å1.22Å
C6N1sing1.35Å1.37Å
N1C2sing1.36Å1.34Å
N1H1sing0.97Å1.02Å
C2N2sing1.37Å1.29Å
C2N3doub1.31Å1.34Å
N2H2N1sing0.97Å1.02Å
N2H2N2sing0.97Å1.02Å
N3C4sing1.34Å1.36Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
PO3PH3P122.3°106.8°
O3PPO1P122.3°109.5°
O3PPO2P111.4°109.5°
O3PPO5'109.7°109.5°
O1PPO2P99.2°109.5°
O1PPO5'109.1°109.5°
O2PPO5'103.2°109.5°
PO2PH2P111.4°106.8°
PO5'C5'124.5°106.8°
O5'C5'C4'111.0°109.5°
O5'C5'H5'1111.6°109.5°
O5'C5'H5'2111.7°109.5°
C4'C5'H5'1111.6°109.5°
C4'C5'H5'2111.6°109.4°
C5'C4'O4'117.2°110.8°
C5'C4'C3'109.7°110.7°
C5'C4'H4'108.1°110.5°
H5'1C5'H5'298.8°109.5°
O4'C4'C3'105.4°103.6°
O4'C4'H4'108.1°110.5°
C4'O4'C1'108.2°106.9°
C3'C4'H4'108.1°110.6°
C4'C3'O3'111.1°111.0°
C4'C3'C2'108.6°102.1°
C4'C3'H3'111.9°110.8°
O4'C1'C2'112.6°107.4°
O4'C1'N9124.1°109.9°
O4'C1'H1'119.0°109.9°
O3'C3'C2'101.0°111.0°
O3'C3'H3'111.9°110.8°
C3'O3'HA111.1°106.9°
C2'C3'H3'111.9°110.9°
C3'C2'C1'103.1°104.2°
C3'C2'H2'1114.6°110.5°
C3'C2'H2'2114.6°110.5°
C1'C2'H2'1114.6°110.6°
C1'C2'H2'2114.6°110.5°
C2'C1'N9123.3°109.9°
C2'C1'H1'126.3°109.8°
H2'1C2'H2'295.9°110.4°
N9C1'H1'15.4°109.9°
C1'N9C8127.7°125.6°
C1'N9C4123.5°125.7°
C8N9C4108.8°108.7°
N9C8N7109.5°109.5°
N9C8O8123.4°125.3°
N9C4C5105.1°107.0°
N9C4N3128.8°133.4°
N7C8O8124.6°125.3°
C8N7C5104.2°107.9°
C8N7H7127.9°126.1°
C5N7H7127.9°126.0°
N7C5C6129.3°134.0°
N7C5C4112.3°106.9°
C6C5C4118.1°119.1°
C5C6O6127.9°120.8°
C5C6N1114.7°118.5°
C5C4N3125.8°119.6°
O6C6N1117.3°120.7°
C6N1C2123.1°120.1°
C6N1H1118.5°120.0°
C2N1H1118.5°119.9°
N1C2N2113.9°119.1°
N1C2N3124.0°121.7°
N2C2N3122.1°119.2°
C2N2H2N1113.9°120.0°
C2N2H2N2122.1°120.0°
C2N3C4114.3°121.1°
H2N1N2H2N2124.0°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O3PPO1PO2P122.6°120.0°
O3PPO1PO5'129.8°120.0°
O3PPO2PO5'117.6°120.0°
O3PPO2PH2P180.0°59.9°
O3PPO5'C5'171.5°180.0°
H3PO3PPO1P180.0°59.9°
H3PO3PPO2P63.2°60.0°
H3PO3PPO5'50.4°180.0°
O1PPO2PO5'112.3°120.0°
O1PPO2PH2P49.9°180.0°
O1PPO5'C5'35.1°60.0°
O2PPO5'C5'69.7°60.0°
O5'PO2PH2P62.4°60.1°
PO5'C5'C4'171.6°180.0°
PO5'C5'H5'146.3°60.0°
PO5'C5'H5'263.1°60.0°
O5'C5'C4'H5'1125.2°120.0°
O5'C5'C4'H5'2125.3°120.0°
O5'C5'H5'1H5'2117.6°120.0°
O5'C5'C4'O4'76.7°65.7°
O5'C5'C4'C3'43.3°179.9°
O5'C5'C4'H4'161.0°57.2°
C4'C5'H5'1H5'2117.5°119.9°
C5'C4'O4'C3'122.3°118.7°
C5'C4'O4'H4'122.3°122.8°
C5'C4'C3'H4'117.6°122.7°
C5'C4'O4'C1'108.4°158.6°
C5'C4'C3'O3'136.6°86.0°
C5'C4'C3'C2'113.3°155.7°
C5'C4'C3'H3'10.7°37.6°
H5'1C5'C4'O4'48.5°174.3°
H5'1C5'C4'C3'168.6°59.9°
H5'1C5'C4'H4'73.8°62.9°
H5'2C5'C4'O4'158.0°54.3°
H5'2C5'C4'C3'81.9°60.1°
H5'2C5'C4'H4'35.7°177.1°
O4'C4'C3'H4'115.4°118.5°
O4'C4'C3'O3'96.5°155.2°
O4'C4'C3'C2'13.7°36.9°
O4'C4'C3'H3'137.7°81.2°
C4'O4'C1'C2'9.5°26.3°
C4'O4'C1'N9168.7°145.8°
C4'O4'C1'H1'174.2°93.1°
C3'C4'O4'C1'13.8°39.8°
C4'C3'O3'C2'115.0°112.8°
C4'C3'O3'H3'125.8°123.6°
C4'C3'C2'H3'124.0°118.1°
C4'C3'O3'HA180.0°174.2°
C4'C3'C2'C1'8.0°20.8°
C4'C3'C2'H2'1133.2°97.9°
C4'C3'C2'H2'2117.3°139.6°
H4'C4'O4'C1'129.2°78.6°
H4'C4'C3'O3'19.0°36.7°
H4'C4'C3'C2'129.1°81.6°
H4'C4'C3'H3'106.9°160.3°
O4'C1'C2'C3'0.6°2.0°
O4'C1'C2'N9178.2°119.5°
O4'C1'C2'H1'163.3°119.5°
O4'C1'C2'H2'1124.6°120.7°
O4'C1'C2'H2'2125.9°116.8°
O4'C1'N9H1'75.4°121.0°
O4'C1'N9C8122.6°58.3°
O4'C1'N9C455.3°121.7°
O3'C3'C2'H3'119.1°123.6°
O3'C3'C2'C1'108.9°139.2°
O3'C3'C2'H2'116.4°20.4°
O3'C3'C2'H2'2125.9°102.1°
C2'C3'O3'HA65.0°61.4°
C3'C2'C1'H2'1125.2°118.7°
C3'C2'C1'H2'2125.3°118.7°
C3'C2'H2'1H2'2120.5°122.6°
C3'C2'C1'N9177.6°121.5°
C3'C2'C1'H1'164.0°117.5°
H3'C3'O3'HA54.1°62.2°
H3'C3'C2'C1'132.0°97.2°
H3'C3'C2'H2'1102.8°144.0°
H3'C3'C2'H2'26.7°21.5°
C1'C2'H2'1H2'2120.5°122.6°
C2'C1'N9H1'106.5°121.0°
C2'C1'N9C855.4°59.7°
C2'C1'N9C4126.7°120.3°
H2'1C2'C1'N957.2°119.8°
H2'1C2'C1'H1'38.7°1.2°
H2'2C2'C1'N952.4°2.7°
H2'2C2'C1'H1'70.8°123.7°
C1'N9C8C4178.1°180.0°
C1'N9C8N7177.9°180.0°
C1'N9C8O819.5°0.0°
C1'N9C4C5178.0°180.0°
C1'N9C4N33.7°0.1°
H1'C1'N9C8162.0°179.3°
H1'C1'N9C420.2°0.6°
N9C8N7O8162.4°179.9°
N9C8N7C50.1°0.0°
N9C8N7H7179.9°180.0°
C8N9C4C50.2°0.0°
C8N9C4N3174.4°179.9°
C4N9C8N70.2°0.0°
C4N9C8O8162.4°179.9°
N9C4C5N70.1°0.0°
N9C4C5C6174.3°180.0°
N9C4C5N3174.5°179.9°
N9C4N3C2173.4°179.9°
C8N7C5H7180.0°179.9°
C8N7C5C6173.6°180.0°
C8N7C5C40.0°0.0°
O8C8N7C5162.2°180.0°
O8C8N7H717.8°0.1°
N7C5C6C4173.3°180.0°
N7C5C6O63.9°0.0°
N7C5C6N1173.9°179.7°
N7C5C4N3174.6°180.0°
H7N7C5C66.4°0.0°
H7N7C5C4180.0°180.0°
C5C6O6N1177.7°179.7°
C5C6N1C20.5°0.5°
C5C6N1H1179.5°180.0°
C6C5C4N30.2°0.0°
C4C5C6O6177.2°180.0°
C4C5C6N10.5°0.3°
C5C4N3C20.3°0.0°
O6C6N1C2177.5°179.7°
O6C6N1H12.5°0.2°
C6N1C2H1180.0°179.5°
C6N1C2N2179.5°179.7°
C6N1C2N30.1°0.5°
N1C2N2N3179.6°179.8°
N1C2N2H2N1180.0°179.8°
N1C2N2H2N20.4°0.6°
N1C2N3C40.3°0.2°
H1N1C2N20.4°0.2°
H1N1C2N3180.0°180.0°
C2N2H2N1H2N2179.6°179.6°
N2C2N3C4179.9°180.0°
N3C2N2H2N10.4°0.0°
N3C2N2H2N2180.0°179.6°

223532

PDB entries from 2024-08-07

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