Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

G3N

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C5'C4'sing1.53Å1.51Å
C5'O5'sing1.43Å1.42Å
N4'C4'sing1.47Å1.46Å
C4'C3'sing1.53Å1.52Å
O5'C1'sing1.43Å1.43Å
C1'O3Bsing1.43Å1.42Å
C1'C2'sing1.53Å1.52Å
O3'C3'sing1.43Å1.38Å
C3'C2'sing1.53Å1.51Å
O3BPBsing1.61Å1.58Å
C2'O2'sing1.43Å1.42Å
O1BPBdoub1.48Å1.46Å
PBO2Bsing1.61Å1.42Å
PBO3Asing1.61Å1.56Å
O4C4doub1.22Å1.22Å
C5C4sing1.42Å1.36Å
C5C6doub1.35Å1.38Å
O3APAsing1.61Å1.59Å
C4N3sing1.35Å1.30Å
O1APAdoub1.48Å1.42Å
C6N1sing1.37Å1.31Å
PAO5Dsing1.61Å1.55Å
PAO2Asing1.61Å1.44Å
N3C2sing1.35Å1.31Å
O5DC5Dsing1.43Å1.41Å
C5DC4Dsing1.53Å1.51Å
N1C2sing1.34Å1.37Å
N1C1Dsing1.47Å1.44Å
C2O2doub1.22Å1.22Å
O4DC1Dsing1.44Å1.39Å
O4DC4Dsing1.44Å1.38Å
C2DC1Dsing1.54Å1.49Å
C2DO2Dsing1.43Å1.40Å
C2DC3Dsing1.54Å1.51Å
C4DC3Dsing1.54Å1.50Å
C3DO3Dsing1.43Å1.42Å
O2BH1sing0.97Å0.95Å
C1'H2sing1.09Å1.10Å
C5'H3sing1.09Å1.10Å
C5'H4sing1.09Å1.10Å
C4'H5sing1.09Å1.10Å
N4'H6sing1.01Å1.00Å
N4'H7sing1.01Å1.00Å
C3'H9sing1.09Å1.10Å
O3'H10sing0.97Å0.95Å
C2'H11sing1.09Å1.10Å
O2'H12sing0.97Å0.95Å
O2AH13sing0.97Å0.95Å
C5DH14sing1.09Å1.10Å
C5DH15sing1.09Å1.10Å
C4DH16sing1.09Å1.10Å
C3DH17sing1.09Å1.10Å
O3DH18sing0.97Å0.95Å
C2DH19sing1.09Å1.10Å
O2DH20sing0.97Å0.95Å
C1DH21sing1.09Å1.10Å
C6H22sing1.08Å1.08Å
C5H23sing1.08Å1.08Å
N3H24sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C4'C5'O5'111.8°109.4°
C5'C4'N4'107.9°109.5°
C5'C4'C3'112.3°109.1°
C4'C5'H3108.9°109.5°
C4'C5'H4108.9°109.4°
C5'C4'H5109.7°109.6°
C5'O5'C1'116.9°114.1°
O5'C5'H3108.9°109.5°
O5'C5'H4108.9°109.5°
N4'C4'C3'107.2°109.5°
N4'C4'H5110.3°109.6°
C4'N4'H6109.5°111.0°
C4'N4'H7109.5°111.0°
C4'C3'O3'108.9°109.5°
C4'C3'C2'115.7°109.0°
C3'C4'H5109.5°109.5°
C4'C3'H9108.6°109.5°
O5'C1'O3B107.2°109.5°
O5'C1'C2'111.2°109.4°
O5'C1'H2110.9°109.5°
O3BC1'C2'106.6°109.5°
C1'O3BPB124.5°122.9°
O3BC1'H2111.2°109.5°
C1'C2'C3'113.5°109.2°
C1'C2'O2'111.1°109.5°
C2'C1'H2109.6°109.5°
C1'C2'H11107.3°109.5°
O3'C3'C2'104.2°109.5°
O3'C3'H9110.6°109.6°
C3'O3'H10109.5°114.0°
C3'C2'O2'108.8°109.5°
C2'C3'H9108.8°109.6°
C3'C2'H11107.5°109.5°
O3BPBO1B104.6°109.5°
O3BPBO2B112.6°109.5°
O3BPBO3A104.4°109.4°
O2'C2'H11108.5°109.5°
C2'O2'H12109.5°114.0°
O1BPBO2B109.7°109.5°
O1BPBO3A112.8°109.5°
O2BPBO3A112.3°109.5°
PBO2BH1109.5°114.0°
PBO3APA127.9°134.0°
O4C4C5121.9°120.4°
O4C4N3118.6°120.3°
C4C5C6120.9°119.2°
C5C4N3119.5°119.4°
C4C5H23119.6°120.4°
C5C6N1118.0°119.7°
C5C6H22121.0°120.1°
C6C5H23119.6°120.5°
O3APAO1A112.5°109.4°
O3APAO5D114.2°109.5°
O3APAO2A106.9°109.5°
C4N3C2120.2°120.2°
C4N3H24119.9°119.9°
O1APAO5D109.7°109.5°
O1APAO2A104.2°109.5°
C6N1C2119.0°120.6°
C6N1C1D119.6°119.6°
N1C6H22121.0°120.2°
O5DPAO2A108.8°109.5°
PAO5DC5D121.9°123.0°
PAO2AH13109.5°113.9°
N3C2N1122.3°121.0°
N3C2O2116.8°119.5°
C2N3H24119.9°119.9°
O5DC5DC4D111.2°109.5°
O5DC5DH14109.0°109.5°
O5DC5DH15109.0°109.5°
C5DC4DO4D107.7°110.4°
C5DC4DC3D109.4°110.4°
C4DC5DH14109.0°109.4°
C4DC5DH15109.0°109.5°
C5DC4DH16111.7°110.3°
C2N1C1D121.3°119.7°
N1C2O2120.8°119.5°
N1C1DO4D106.9°110.4°
N1C1DC2D115.7°110.4°
N1C1DH21110.5°110.4°
C1DO4DC4D114.0°105.3°
O4DC1DC2D102.1°104.8°
O4DC1DH21111.3°110.4°
O4DC4DC3D101.9°104.8°
O4DC4DH16113.8°110.4°
C1DC2DO2D109.2°110.5°
C1DC2DC3D99.0°104.0°
C1DC2DH19111.3°110.5°
C2DC1DH21109.9°110.4°
O2DC2DC3D112.8°110.5°
O2DC2DH19112.7°110.5°
C2DO2DH20109.5°114.0°
C2DC3DC4D101.5°104.1°
C2DC3DO3D110.9°110.5°
C2DC3DH17111.0°110.6°
C3DC2DH19111.0°110.6°
C4DC3DO3D109.7°110.5°
C3DC4DH16111.8°110.3°
C4DC3DH17111.0°110.5°
O3DC3DH17112.3°110.4°
C3DO3DH18109.5°114.0°
H3C5'H4109.5°109.5°
H6N4'H7109.5°111.0°
H14C5DH15109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C4'C5'O5'H3120.4°120.0°
C4'C5'O5'H4120.3°119.9°
C5'C4'N4'C3'121.1°119.6°
C5'C4'N4'H5119.8°120.2°
C5'C4'C3'H5122.0°119.9°
C4'C5'O5'C1'57.4°61.2°
C5'C4'C3'O3'75.9°62.9°
C5'C4'C3'C2'40.9°57.0°
C4'C5'H3H4118.9°120.0°
C5'C4'N4'H6180.0°60.1°
C5'C4'N4'H760.0°176.0°
C5'C4'C3'H9163.6°176.9°
O5'C5'C4'N4'165.2°177.5°
O5'C5'C4'C3'47.3°57.7°
C5'O5'C1'O3B171.7°178.8°
C5'O5'C1'C2'55.6°61.2°
C5'O5'C1'H266.8°58.8°
O5'C5'H3H4118.9°120.1°
O5'C5'C4'H574.6°62.3°
N4'C4'C3'H5119.6°120.2°
N4'C4'C3'O3'42.4°57.0°
N4'C4'C3'C2'159.2°176.9°
N4'C4'C5'H374.4°57.4°
N4'C4'C5'H444.9°62.6°
C4'N4'H6H7120.0°123.9°
N4'C4'C3'H978.1°63.2°
C4'C3'C2'C1'40.0°57.0°
C4'C3'O3'C2'124.0°119.5°
C4'C3'O3'H9119.3°120.2°
C4'C3'C2'H9122.6°119.8°
C4'C3'C2'O2'84.2°62.9°
C3'C4'C5'H3167.6°62.4°
C3'C4'C5'H473.1°177.6°
C3'C4'N4'H658.9°179.7°
C3'C4'N4'H761.1°56.4°
C4'C3'O3'H10180.0°180.0°
C4'C3'C2'H11158.5°176.9°
O5'C1'O3BC2'119.2°119.9°
O5'C1'O3BH2121.4°120.1°
O5'C1'C2'H2123.1°120.0°
O5'C1'C2'C3'44.9°57.6°
O5'C1'O3BPB149.8°90.1°
O5'C1'C2'O2'78.0°62.3°
C1'O5'C5'H3177.7°58.8°
C1'O5'C5'H463.0°178.9°
O5'C1'C2'H11163.5°177.6°
O3BC1'C2'H2120.4°120.0°
O3BC1'C2'C3'161.4°177.6°
O3BC1'C2'O2'38.5°57.6°
C1'O3BPBO1B38.2°55.0°
C1'O3BPBO2B157.2°65.0°
C1'O3BPBO3A80.6°175.0°
O3BC1'C2'H1180.0°62.5°
C1'C2'C3'O3'79.4°62.9°
C1'C2'C3'O2'124.2°119.9°
C1'C2'C3'H11118.5°120.0°
C2'C1'O3BPB91.0°150.0°
C1'C2'O2'H11117.7°120.1°
C1'C2'C3'H9162.6°176.8°
C1'C2'O2'H1279.4°60.0°
O3'C3'C2'H9117.9°120.3°
O3'C3'C2'O2'156.4°177.2°
O3'C3'C4'H5162.0°177.2°
O3'C3'C2'H1139.0°57.1°
C3'C2'O2'H11116.7°120.2°
C3'C2'C1'H278.2°62.4°
C2'C3'C4'H581.1°63.0°
C2'C3'O3'H1056.0°60.5°
C3'C2'O2'H12155.0°179.7°
O3BPBO1BO2B121.0°120.0°
O3BPBO1BO3A112.9°120.0°
O3BPBO2BO3A117.6°120.0°
O3BPBO3APA73.6°160.0°
O3BPBO2BH1116.1°59.9°
PBO3BC1'H228.5°30.0°
O2'C2'C1'H2158.9°177.7°
O2'C2'C3'H938.4°56.9°
O1BPBO2BO3A126.4°120.0°
O1BPBO3APA173.4°40.0°
O1BPBO2BH10.0°180.0°
O2BPBO3APA48.7°80.0°
PBO3APAO1A67.3°45.0°
PBO3APAO5D58.6°165.0°
PBO3APAO2A178.9°75.0°
O3APBO2BH1126.4°60.0°
O4C4C5N3176.9°180.0°
O4C4C5C6179.0°180.0°
O4C4N3C2179.2°180.0°
O4C4C5H231.0°0.0°
O4C4N3H240.8°0.1°
C4C5C6H23180.0°180.0°
C4C5C6N12.1°0.0°
C5C4N3C22.2°0.0°
C4C5C6H22177.9°180.0°
C5C4N3H24177.8°180.0°
C6C5C4N32.1°0.0°
C5C6N1H22180.0°180.0°
C5C6N1C22.2°0.0°
C5C6N1C1D178.7°179.7°
O3APAO1AO5D128.2°120.0°
O3APAO1AO2A115.5°120.0°
O3APAO5DO2A119.3°120.0°
O3APAO5DC5D50.6°175.0°
O3APAO2AH13119.3°60.0°
C4N3C2H24180.0°180.0°
C4N3C2N12.4°0.0°
C4N3C2O2179.4°179.7°
N3C4C5H23177.9°180.0°
O1APAO5DO2A113.4°120.0°
O1APAO5DC5D177.9°55.0°
O1APAO2AH130.0°179.9°
C6N1C2N32.5°0.0°
C6N1C2C1D176.4°179.7°
C6N1C2O2179.4°179.7°
C6N1C1DO4D50.1°50.7°
C6N1C1DC2D62.9°64.7°
C6N1C1DH21171.4°173.0°
N1C6C5H23177.9°180.0°
PAO5DC5DC4D133.9°180.0°
O5DPAO2AH13117.0°60.1°
PAO5DC5DH14105.8°60.1°
PAO5DC5DH1513.7°60.0°
O2APAO5DC5D68.7°65.0°
N3C2N1O2178.1°179.7°
N3C2N1C1D178.9°179.7°
O5DC5DC4DH14120.2°120.0°
O5DC5DC4DH15120.3°120.0°
O5DC5DC4DO4D63.0°69.6°
O5DC5DC4DC3D173.1°175.0°
O5DC5DH14H15119.2°120.0°
O5DC5DC4DH1662.6°52.8°
C5DC4DO4DC1D107.2°159.4°
C5DC4DO4DC3D115.1°118.9°
C5DC4DO4DH16124.4°122.3°
C5DC4DC3DC2D80.7°142.8°
C5DC4DC3DH16124.3°122.2°
C5DC4DC3DO3D162.0°98.5°
C4DC5DH14H15119.2°120.0°
C5DC4DC3DH1737.2°24.0°
C2N1C1DO4D126.3°129.6°
C2N1C1DC2D120.8°115.0°
C2N1C1DH214.9°7.3°
C2N1C6H22177.8°180.0°
N1C2N3H24177.6°180.0°
C1DN1C2O23.0°0.0°
N1C1DO4DC2D122.0°118.9°
N1C1DO4DH21120.8°122.3°
N1C1DO4DC4D143.0°159.4°
N1C1DC2DH21126.0°122.3°
N1C1DC2DO2D86.2°98.5°
N1C1DC2DC3D155.7°142.9°
N1C1DC2DH1938.8°24.1°
C1DN1C6H221.3°0.3°
O2C2N3H240.5°0.3°
O4DC1DC2DH21118.3°118.9°
O4DC1DC2DO2D158.1°142.6°
O4DC1DC2DC3D40.0°24.0°
C1DO4DC4DC3D7.9°40.5°
C1DO4DC4DH16128.4°78.4°
O4DC1DC2DH1976.9°94.8°
C4DO4DC1DC2D21.1°40.5°
O4DC4DC3DC2D33.1°23.9°
O4DC4DC3DH16121.9°118.9°
O4DC4DC3DO3D84.2°142.6°
O4DC4DC5DH1457.2°50.4°
O4DC4DC5DH15176.7°170.4°
O4DC4DC3DH17151.1°94.8°
C4DO4DC1DH2196.2°78.3°
C1DC2DO2DC3D109.0°114.6°
C1DC2DO2DH19124.3°122.6°
C1DC2DC3DH19117.1°118.7°
C1DC2DC3DC4D45.0°0.0°
C1DC2DC3DO3D71.5°118.7°
C1DC2DC3DH17163.0°118.7°
C1DC2DO2DH20180.0°180.0°
O2DC2DC3DH19127.6°122.7°
O2DC2DC3DC4D160.3°118.7°
O2DC2DC3DO3D43.8°0.0°
O2DC2DC3DH1781.7°122.7°
O2DC2DC1DH2139.8°23.7°
C2DC3DC4DO3D117.3°118.7°
C2DC3DC4DH17118.0°118.8°
C2DC3DO3DH17124.7°122.8°
C2DC3DC4DH16155.0°95.0°
C2DC3DO3DH18180.0°65.4°
C3DC2DO2DH2071.0°65.4°
C3DC2DC1DH2178.3°94.9°
C4DC3DO3DH17124.0°122.6°
C3DC4DC5DH1452.8°65.0°
C3DC4DC5DH1566.7°55.0°
C4DC3DO3DH1868.7°179.9°
C4DC3DC2DH1972.1°118.7°
O3DC3DC4DH1637.7°23.7°
O3DC3DC2DH19171.4°122.6°
H2C1'C2'H1140.4°57.5°
H3C5'C4'H545.7°177.7°
H4C5'C4'H5165.0°57.7°
H5C4'N4'H660.2°60.2°
H5C4'N4'H7179.8°63.7°
H5C4'C3'H941.6°56.9°
H9C3'O3'H1060.7°59.8°
H9C3'C2'H1178.9°63.2°
H11C2'O2'H1238.3°60.1°
H14C5DC4DH16177.2°172.7°
H15C5DC4DH1657.7°67.2°
H16C4DC3DH1787.0°146.3°
H17C3DO3DH1855.3°57.4°
H17C3DC2DH1945.9°0.0°
H19C2DO2DH2055.7°57.3°
H19C2DC1DH21164.9°146.3°
H22C6C5H232.1°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon