G31

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
O3P	P	doub	1.48Å	1.41Å
P	O1P	sing	1.61Å	1.46Å
P	O2P	sing	1.61Å	1.63Å
P	O5'	sing	1.61Å	1.62Å
O1P	H1P	sing	0.97Å	0.95Å
O2P	H2P	sing	0.97Å	0.95Å
O5'	C5'	sing	1.43Å	1.45Å
C5'	C4'	sing	1.53Å	1.54Å
C5'	H5'1	sing	1.09Å	1.12Å
C5'	H5'2	sing	1.09Å	1.11Å
C4'	O4'	sing	1.45Å	1.40Å
C4'	C3'	sing	1.54Å	1.51Å
C4'	H4'	sing	1.09Å	1.11Å
O4'	C1'	sing	1.44Å	1.44Å
C3'	C2'	sing	1.54Å	1.51Å
C3'	C3M	sing	1.53Å	1.53Å
C3'	H3'	sing	1.09Å	1.11Å
C2'	C1'	sing	1.54Å	1.50Å
C2'	H2'1	sing	1.09Å	1.12Å
C2'	H2'2	sing	1.09Å	1.12Å
C1'	N9	sing	1.46Å	1.47Å
C1'	H1'	sing	1.09Å	1.11Å
N9	C8	sing	1.36Å	1.37Å	Aromatic
N9	C4	sing	1.37Å	1.37Å	Aromatic
C8	N7	doub	1.30Å	1.31Å	Aromatic
C8	H8	sing	1.08Å	1.10Å
N7	C5	sing	1.36Å	1.39Å	Aromatic
C5	C6	sing	1.41Å	1.41Å
C5	C4	doub	1.40Å	1.38Å	Aromatic
C6	O6	doub	1.22Å	1.23Å
C6	N1	sing	1.35Å	1.38Å
N1	C2	sing	1.36Å	1.36Å
N1	H1	sing	0.97Å	1.02Å
C2	N2	sing	1.37Å	1.35Å
C2	N3	doub	1.31Å	1.34Å
N2	H2N1	sing	0.97Å	1.02Å
N2	H2N2	sing	0.97Å	1.02Å
N3	C4	sing	1.34Å	1.35Å
C3M	H3M1	sing	1.09Å	1.12Å
C3M	H3M2	sing	1.09Å	1.12Å
C3M	H3M3	sing	1.09Å	1.11Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O3P	P	O1P	127.6°	109.5°
O3P	P	O2P	105.7°	109.5°
O3P	P	O5'	108.1°	109.5°
O1P	P	O2P	102.9°	109.4°
O1P	P	O5'	108.6°	109.4°
P	O1P	H1P	127.5°	106.8°
O2P	P	O5'	100.6°	109.5°
P	O2P	H2P	105.7°	106.8°
P	O5'	C5'	122.8°	106.8°
O5'	C5'	C4'	103.8°	109.5°
O5'	C5'	H5'1	114.3°	109.4°
O5'	C5'	H5'2	114.3°	109.5°
C4'	C5'	H5'1	114.4°	109.4°
C4'	C5'	H5'2	114.3°	109.5°
C5'	C4'	O4'	109.5°	110.3°
C5'	C4'	C3'	111.9°	110.7°
C5'	C4'	H4'	109.5°	110.3°
H5'1	C5'	H5'2	96.2°	109.5°
O4'	C4'	C3'	106.9°	104.7°
O4'	C4'	H4'	109.5°	110.3°
C4'	O4'	C1'	111.6°	105.4°
C3'	C4'	H4'	109.5°	110.3°
C4'	C3'	C2'	104.2°	104.2°
C4'	C3'	C3M	108.7°	110.5°
C4'	C3'	H3'	109.4°	110.4°
O4'	C1'	C2'	105.7°	104.8°
O4'	C1'	N9	112.7°	110.5°
O4'	C1'	H1'	109.7°	110.4°
C2'	C3'	C3M	115.6°	110.5°
C2'	C3'	H3'	109.4°	110.5°
C3'	C2'	C1'	103.9°	104.1°
C3'	C2'	H2'1	114.3°	110.6°
C3'	C2'	H2'2	114.3°	110.5°
C3M	C3'	H3'	109.4°	110.5°
C3'	C3M	H3M1	108.8°	109.4°
C3'	C3M	H3M2	112.5°	109.5°
C3'	C3M	H3M3	112.5°	109.5°
C1'	C2'	H2'1	114.3°	110.5°
C1'	C2'	H2'2	114.3°	110.5°
C2'	C1'	N9	109.3°	110.4°
C2'	C1'	H1'	109.7°	110.3°
H2'1	C2'	H2'2	96.2°	110.6°
N9	C1'	H1'	109.7°	110.3°
C1'	N9	C8	129.4°	126.2°
C1'	N9	C4	124.2°	126.3°
C8	N9	C4	106.1°	107.5°
N9	C8	N7	113.7°	109.8°
N9	C8	H8	123.2°	125.1°
N9	C4	C5	105.8°	106.1°
N9	C4	N3	125.3°	134.2°
N7	C8	H8	123.1°	125.1°
C8	N7	C5	103.6°	109.3°
N7	C5	C6	131.7°	134.2°
N7	C5	C4	110.5°	107.2°
C6	C5	C4	117.6°	118.6°
C5	C6	O6	128.5°	120.9°
C5	C6	N1	115.4°	118.4°
C5	C4	N3	128.8°	119.7°
O6	C6	N1	116.1°	120.8°
C6	N1	C2	119.8°	120.3°
C6	N1	H1	120.1°	119.9°
C2	N1	H1	120.1°	119.8°
N1	C2	N2	113.2°	119.0°
N1	C2	N3	128.8°	122.0°
N2	C2	N3	118.0°	119.0°
C2	N2	H2N1	113.2°	120.0°
C2	N2	H2N2	118.0°	120.0°
C2	N3	C4	109.4°	121.1°
H2N1	N2	H2N2	128.8°	120.0°
H3M1	C3M	H3M2	112.4°	109.5°
H3M1	C3M	H3M3	112.5°	109.4°
H3M2	C3M	H3M3	97.9°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O3P	P	O1P	O2P	121.7°	120.0°
O3P	P	O1P	O5'	132.2°	120.0°
O3P	P	O2P	O5'	112.4°	120.1°
O3P	P	O1P	H1P	180.0°	60.0°
O3P	P	O2P	H2P	180.0°	180.0°
O3P	P	O5'	C5'	40.4°	60.0°
O1P	P	O2P	O5'	112.1°	119.9°
O1P	P	O2P	H2P	44.5°	60.0°
O1P	P	O5'	C5'	101.5°	180.0°
O2P	P	O1P	H1P	58.3°	60.0°
O2P	P	O5'	C5'	151.0°	60.1°
O5'	P	O1P	H1P	47.8°	180.0°
O5'	P	O2P	H2P	67.6°	59.9°
P	O5'	C5'	C4'	176.6°	180.0°
P	O5'	C5'	H5'1	58.2°	60.1°
P	O5'	C5'	H5'2	51.3°	59.9°
O5'	C5'	C4'	H5'1	125.2°	119.9°
O5'	C5'	C4'	H5'2	125.3°	120.1°
O5'	C5'	H5'1	H5'2	120.2°	120.0°
O5'	C5'	C4'	O4'	62.2°	61.5°
O5'	C5'	C4'	C3'	179.4°	176.9°
O5'	C5'	C4'	H4'	57.8°	60.7°
C4'	C5'	H5'1	H5'2	120.2°	120.0°
C5'	C4'	O4'	C3'	121.5°	119.2°
C5'	C4'	O4'	H4'	120.0°	122.2°
C5'	C4'	C3'	H4'	121.6°	122.4°
C5'	C4'	O4'	C1'	126.4°	159.5°
C5'	C4'	C3'	C2'	140.4°	142.7°
C5'	C4'	C3'	C3M	95.8°	98.6°
C5'	C4'	C3'	H3'	23.6°	24.0°
H5'1	C5'	C4'	O4'	172.6°	178.6°
H5'1	C5'	C4'	C3'	54.2°	63.2°
H5'1	C5'	C4'	H4'	67.4°	59.3°
H5'2	C5'	C4'	O4'	63.1°	58.6°
H5'2	C5'	C4'	C3'	55.3°	56.8°
H5'2	C5'	C4'	H4'	176.9°	179.3°
O4'	C4'	C3'	H4'	118.5°	118.7°
O4'	C4'	C3'	C2'	20.5°	23.8°
O4'	C4'	C3'	C3M	144.3°	142.5°
O4'	C4'	C3'	H3'	96.3°	94.9°
C4'	O4'	C1'	C2'	12.8°	40.4°
C4'	O4'	C1'	N9	106.5°	159.3°
C4'	O4'	C1'	H1'	131.0°	78.4°
C3'	C4'	O4'	C1'	5.0°	40.3°
C4'	C3'	C2'	C3M	119.2°	118.7°
C4'	C3'	C2'	H3'	116.8°	118.7°
C4'	C3'	C3M	H3'	119.4°	122.5°
C4'	C3'	C2'	C1'	27.4°	0.1°
C4'	C3'	C2'	H2'1	97.8°	118.6°
C4'	C3'	C2'	H2'2	152.7°	118.7°
C4'	C3'	C3M	H3M1	180.0°	178.1°
C4'	C3'	C3M	H3M2	54.7°	61.9°
C4'	C3'	C3M	H3M3	54.7°	58.2°
H4'	C4'	O4'	C1'	113.5°	78.3°
H4'	C4'	C3'	C2'	98.0°	94.9°
H4'	C4'	C3'	C3M	25.8°	23.9°
H4'	C4'	C3'	H3'	145.2°	146.4°
O4'	C1'	C2'	C3'	24.9°	24.0°
O4'	C1'	C2'	N9	121.6°	119.0°
O4'	C1'	C2'	H1'	118.2°	118.8°
O4'	C1'	C2'	H2'1	100.4°	94.7°
O4'	C1'	C2'	H2'2	150.2°	142.6°
O4'	C1'	N9	H1'	122.5°	122.3°
O4'	C1'	N9	C8	2.7°	25.5°
O4'	C1'	N9	C4	171.5°	154.9°
C2'	C3'	C3M	H3'	123.9°	122.7°
C3'	C2'	C1'	H2'1	125.3°	118.7°
C3'	C2'	C1'	H2'2	125.3°	118.6°
C3'	C2'	H2'1	H2'2	120.3°	122.7°
C3'	C2'	C1'	N9	96.7°	143.0°
C3'	C2'	C1'	H1'	143.1°	94.8°
C2'	C3'	C3M	H3M1	63.3°	63.3°
C2'	C3'	C3M	H3M2	61.9°	176.7°
C2'	C3'	C3M	H3M3	171.4°	56.6°
C3M	C3'	C2'	C1'	146.7°	118.6°
C3M	C3'	C2'	H2'1	21.4°	122.7°
C3M	C3'	C2'	H2'2	88.1°	0.0°
C3'	C3M	H3M1	H3M2	125.3°	120.0°
C3'	C3M	H3M1	H3M3	125.3°	120.0°
C3'	C3M	H3M2	H3M3	118.4°	120.1°
H3'	C3'	C2'	C1'	89.4°	118.7°
H3'	C3'	C2'	H2'1	145.4°	0.1°
H3'	C3'	C2'	H2'2	35.9°	122.6°
H3'	C3'	C3M	H3M1	60.6°	59.3°
H3'	C3'	C3M	H3M2	174.1°	60.6°
H3'	C3'	C3M	H3M3	64.7°	179.3°
C1'	C2'	H2'1	H2'2	120.2°	122.6°
C2'	C1'	N9	H1'	120.3°	122.2°
C2'	C1'	N9	C8	114.5°	90.0°
C2'	C1'	N9	C4	71.3°	89.7°
H2'1	C2'	C1'	N9	138.1°	24.3°
H2'1	C2'	C1'	H1'	17.8°	146.5°
H2'2	C2'	C1'	N9	28.6°	98.4°
H2'2	C2'	C1'	H1'	91.7°	23.8°
C1'	N9	C8	C4	175.1°	179.7°
C1'	N9	C8	N7	179.8°	180.0°
C1'	N9	C8	H8	0.2°	0.0°
C1'	N9	C4	C5	180.0°	179.9°
C1'	N9	C4	N3	2.9°	0.8°
H1'	C1'	N9	C8	125.2°	147.8°
H1'	C1'	N9	C4	49.0°	32.5°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	2.7°	0.0°
C8	N9	C4	C5	4.6°	0.4°
C8	N9	C4	N3	178.3°	179.5°
C4	N9	C8	N7	4.8°	0.3°
C4	N9	C8	H8	175.2°	179.7°
N9	C4	C5	N7	3.2°	0.4°
N9	C4	C5	C6	178.9°	179.8°
N9	C4	C5	N3	177.0°	179.2°
N9	C4	N3	C2	178.9°	179.5°
C8	N7	C5	C6	175.3°	179.9°
C8	N7	C5	C4	0.4°	0.3°
H8	C8	N7	C5	177.3°	180.0°
N7	C5	C6	C4	174.6°	179.6°
N7	C5	C6	O6	4.7°	0.0°
N7	C5	C6	N1	178.0°	179.9°
N7	C5	C4	N3	179.8°	179.7°
C5	C6	O6	N1	177.3°	180.0°
C5	C6	N1	C2	1.9°	0.0°
C5	C6	N1	H1	178.2°	179.9°
C6	C5	C4	N3	4.1°	0.6°
C4	C5	C6	O6	179.3°	179.7°
C4	C5	C6	N1	3.4°	0.3°
C5	C4	N3	C2	2.5°	0.6°
O6	C6	N1	C2	179.5°	180.0°
O6	C6	N1	H1	0.5°	0.1°
C6	N1	C2	H1	180.0°	179.9°
C6	N1	C2	N2	177.8°	180.0°
C6	N1	C2	N3	0.5°	0.1°
N1	C2	N2	N3	178.4°	180.0°
N1	C2	N2	H2N1	180.0°	179.9°
N1	C2	N2	H2N2	1.6°	0.0°
N1	C2	N3	C4	0.6°	0.3°
H1	N1	C2	N2	2.2°	0.1°
H1	N1	C2	N3	179.6°	180.0°
C2	N2	H2N1	H2N2	178.2°	180.0°
N2	C2	N3	C4	177.6°	179.7°
N3	C2	N2	H2N1	1.6°	0.0°
N3	C2	N2	H2N2	180.0°	180.0°
H3M1	C3M	H3M2	H3M3	118.3°	120.0°

Definition date:	1992-07-15
Last modified:	2011-06-04
Release status:	REL
Processing site:	RCSB
Derived from:	1D26