G2S
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP3 | P | sing | 1.63Å | 16.91Å | |
| OP3 | HOP3 | sing | 0.98Å | 0.95Å | |
| P | S1P | doub | 1.96Å | 1.98Å | |
| P | S2P | sing | 2.12Å | 1.98Å | |
| P | O5' | sing | 1.63Å | 1.61Å | |
| S2P | HOP2 | sing | 1.34Å | 1.30Å | |
| O5' | C5' | sing | 1.42Å | 1.42Å | |
| C5' | C4' | sing | 1.52Å | 1.53Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'' | sing | 1.09Å | 1.10Å | |
| C4' | O4' | sing | 1.44Å | 1.42Å | |
| C4' | C3' | sing | 1.52Å | 1.54Å | |
| C4' | H4' | sing | 1.10Å | 1.10Å | |
| O4' | C1' | sing | 1.44Å | 1.41Å | |
| C3' | O3' | sing | 1.43Å | 1.42Å | |
| C3' | C2' | sing | 1.51Å | 1.53Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C2' | C1' | sing | 1.52Å | 1.52Å | |
| C2' | H2'1 | sing | 1.10Å | 1.10Å | |
| C1' | N9 | sing | 1.46Å | 1.48Å | |
| C1' | H1' | sing | 1.10Å | 1.10Å | |
| N9 | C8 | sing | 1.38Å | 1.37Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.37Å | Aromatic |
| C8 | N7 | doub | 1.32Å | 1.31Å | Aromatic |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| N7 | C5 | sing | 1.36Å | 1.40Å | Aromatic |
| C5 | C6 | sing | 1.44Å | 1.44Å | |
| C5 | C4 | doub | 1.37Å | 1.38Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.23Å | |
| C6 | N1 | sing | 1.40Å | 1.38Å | |
| N1 | C2 | sing | 1.41Å | 1.36Å | |
| N1 | H1 | sing | 1.02Å | 1.00Å | |
| C2 | N2 | sing | 1.37Å | 1.31Å | |
| C2 | N3 | doub | 1.32Å | 1.33Å | |
| N2 | H21 | sing | 0.99Å | 1.00Å | |
| N2 | H22 | sing | 0.99Å | 1.00Å | |
| N3 | C4 | sing | 1.35Å | 1.37Å | |
| C2' | H2'2 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| P | OP3 | HOP3 | 124.6° | 118.4° |
| OP3 | P | S1P | 124.6° | 110.6° |
| OP3 | P | S2P | 69.3° | 105.4° |
| OP3 | P | O5' | 41.7° | 98.6° |
| S1P | P | S2P | 108.4° | 119.0° |
| S1P | P | O5' | 110.6° | 113.2° |
| S2P | P | O5' | 111.0° | 107.8° |
| P | S2P | HOP2 | 109.5° | 97.8° |
| P | O5' | C5' | 120.3° | 120.1° |
| O5' | C5' | C4' | 112.4° | 108.7° |
| O5' | C5' | H5' | 108.5° | 109.2° |
| O5' | C5' | H5'' | 107.9° | 109.2° |
| C4' | C5' | H5' | 108.5° | 110.1° |
| C4' | C5' | H5'' | 107.8° | 110.1° |
| C5' | C4' | O4' | 110.4° | 108.0° |
| C5' | C4' | C3' | 115.0° | 112.7° |
| C5' | C4' | H4' | 104.3° | 109.4° |
| H5' | C5' | H5'' | 111.8° | 109.6° |
| O4' | C4' | C3' | 107.6° | 106.8° |
| O4' | C4' | H4' | 112.3° | 107.7° |
| C4' | O4' | C1' | 106.5° | 108.7° |
| C3' | C4' | H4' | 107.3° | 112.0° |
| C4' | C3' | O3' | 107.4° | 109.6° |
| C4' | C3' | C2' | 102.2° | 103.2° |
| C4' | C3' | H3' | 116.5° | 114.0° |
| O4' | C1' | C2' | 103.1° | 106.7° |
| O4' | C1' | N9 | 111.3° | 110.0° |
| O4' | C1' | H1' | 113.9° | 108.1° |
| O3' | C3' | C2' | 112.8° | 108.4° |
| O3' | C3' | H3' | 106.6° | 107.8° |
| C3' | O3' | HO3' | 109.5° | 106.6° |
| C2' | C3' | H3' | 111.4° | 113.7° |
| C3' | C2' | C1' | 100.6° | 101.6° |
| C3' | C2' | H2'1 | 112.5° | 110.0° |
| C3' | C2' | H2'2 | 114.3° | 114.2° |
| C1' | C2' | H2'1 | 112.5° | 110.5° |
| C2' | C1' | N9 | 113.6° | 114.3° |
| C2' | C1' | H1' | 111.7° | 111.7° |
| C1' | C2' | H2'2 | 114.4° | 111.7° |
| H2'1 | C2' | H2'2 | 102.9° | 108.7° |
| N9 | C1' | H1' | 103.6° | 105.9° |
| C1' | N9 | C8 | 129.2° | 126.1° |
| C1' | N9 | C4 | 125.3° | 127.3° |
| C8 | N9 | C4 | 105.5° | 106.6° |
| N9 | C8 | N7 | 114.3° | 112.5° |
| N9 | C8 | H8 | 122.9° | 122.0° |
| N9 | C4 | C5 | 106.3° | 104.9° |
| N9 | C4 | N3 | 126.3° | 126.0° |
| N7 | C8 | H8 | 122.9° | 125.5° |
| C8 | N7 | C5 | 103.7° | 103.9° |
| N7 | C5 | C6 | 131.7° | 128.7° |
| N7 | C5 | C4 | 110.2° | 112.1° |
| C6 | C5 | C4 | 118.0° | 119.2° |
| C5 | C6 | O6 | 129.8° | 123.8° |
| C5 | C6 | N1 | 113.2° | 110.8° |
| C5 | C4 | N3 | 127.4° | 129.1° |
| O6 | C6 | N1 | 117.0° | 125.4° |
| C6 | N1 | C2 | 124.2° | 125.3° |
| C6 | N1 | H1 | 117.9° | 117.4° |
| C2 | N1 | H1 | 117.9° | 117.4° |
| N1 | C2 | N2 | 117.5° | 115.4° |
| N1 | C2 | N3 | 124.4° | 122.6° |
| N2 | C2 | N3 | 118.2° | 122.0° |
| C2 | N2 | H21 | 110.1° | 118.3° |
| C2 | N2 | H22 | 125.0° | 118.3° |
| C2 | N3 | C4 | 112.7° | 113.0° |
| H21 | N2 | H22 | 125.0° | 123.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP3 | P | S1P | S2P | 77.1° | 122.2° |
| OP3 | P | S1P | O5' | 44.8° | 109.6° |
| OP3 | P | S2P | O5' | 0.7° | 104.5° |
| OP3 | P | S2P | HOP2 | 48.0° | 66.6° |
| OP3 | P | O5' | C5' | 168.0° | 180.0° |
| HOP3 | OP3 | P | S1P | 180.0° | 167.3° |
| HOP3 | OP3 | P | S2P | 81.4° | 37.4° |
| HOP3 | OP3 | P | O5' | 97.6° | 73.8° |
| S1P | P | S2P | O5' | 121.6° | 130.7° |
| S1P | P | S2P | HOP2 | 168.9° | 58.2° |
| S1P | P | O5' | C5' | 48.6° | 63.1° |
| S2P | P | O5' | C5' | 169.0° | 70.7° |
| O5' | P | S2P | HOP2 | 47.3° | 171.1° |
| P | O5' | C5' | C4' | 168.4° | 180.0° |
| P | O5' | C5' | H5' | 71.6° | 59.9° |
| P | O5' | C5' | H5'' | 49.6° | 59.9° |
| O5' | C5' | C4' | H5' | 120.0° | 119.6° |
| O5' | C5' | C4' | H5'' | 118.8° | 119.5° |
| O5' | C5' | H5' | H5'' | 118.8° | 119.6° |
| O5' | C5' | C4' | O4' | 65.7° | 61.8° |
| O5' | C5' | C4' | C3' | 56.2° | 179.5° |
| O5' | C5' | C4' | H4' | 173.5° | 55.2° |
| C4' | C5' | H5' | H5'' | 118.8° | 121.2° |
| C5' | C4' | O4' | C3' | 126.2° | 121.5° |
| C5' | C4' | O4' | H4' | 115.9° | 118.0° |
| C5' | C4' | C3' | H4' | 115.6° | 123.8° |
| C5' | C4' | O4' | C1' | 148.2° | 116.0° |
| C5' | C4' | C3' | O3' | 124.0° | 152.1° |
| C5' | C4' | C3' | C2' | 117.1° | 92.6° |
| C5' | C4' | C3' | H3' | 4.6° | 31.2° |
| H5' | C5' | C4' | O4' | 174.3° | 57.8° |
| H5' | C5' | C4' | C3' | 63.8° | 60.0° |
| H5' | C5' | C4' | H4' | 53.5° | 174.7° |
| H5'' | C5' | C4' | O4' | 53.1° | 178.7° |
| H5'' | C5' | C4' | C3' | 175.0° | 60.9° |
| H5'' | C5' | C4' | H4' | 67.7° | 64.3° |
| O4' | C4' | C3' | H4' | 121.0° | 117.7° |
| O4' | C4' | C3' | O3' | 112.6° | 89.4° |
| O4' | C4' | C3' | C2' | 6.3° | 25.9° |
| O4' | C4' | C3' | H3' | 128.0° | 149.7° |
| C4' | O4' | C1' | C2' | 41.6° | 17.3° |
| C4' | O4' | C1' | N9 | 163.7° | 141.8° |
| C4' | O4' | C1' | H1' | 79.6° | 103.1° |
| C3' | C4' | O4' | C1' | 22.0° | 5.5° |
| C4' | C3' | O3' | C2' | 111.9° | 111.9° |
| C4' | C3' | O3' | H3' | 125.5° | 124.6° |
| C4' | C3' | C2' | H3' | 125.1° | 123.9° |
| C4' | C3' | O3' | HO3' | 82.9° | 46.6° |
| C4' | C3' | C2' | C1' | 29.5° | 34.8° |
| C4' | C3' | C2' | H2'1 | 90.5° | 82.2° |
| C4' | C3' | C2' | H2'2 | 152.5° | 155.2° |
| H4' | C4' | O4' | C1' | 95.9° | 126.0° |
| H4' | C4' | C3' | O3' | 8.4° | 28.3° |
| H4' | C4' | C3' | C2' | 127.4° | 143.6° |
| H4' | C4' | C3' | H3' | 111.0° | 92.6° |
| O4' | C1' | C2' | C3' | 44.0° | 32.7° |
| O4' | C1' | C2' | N9 | 120.6° | 121.8° |
| O4' | C1' | C2' | H1' | 122.7° | 117.9° |
| O4' | C1' | C2' | H2'1 | 76.0° | 84.0° |
| O4' | C1' | N9 | H1' | 122.8° | 116.5° |
| O4' | C1' | N9 | C8 | 58.1° | 33.5° |
| O4' | C1' | N9 | C4 | 121.6° | 146.5° |
| O4' | C1' | C2' | H2'2 | 167.1° | 154.9° |
| O3' | C3' | C2' | H3' | 119.9° | 119.9° |
| O3' | C3' | C2' | C1' | 85.5° | 81.3° |
| O3' | C3' | C2' | H2'1 | 154.5° | 161.6° |
| O3' | C3' | C2' | H2'2 | 37.5° | 39.1° |
| C2' | C3' | O3' | HO3' | 165.2° | 65.3° |
| C3' | C2' | C1' | H2'1 | 120.0° | 116.7° |
| C3' | C2' | C1' | H2'2 | 123.1° | 122.2° |
| C3' | C2' | H2'1 | H2'2 | 123.6° | 125.7° |
| C3' | C2' | C1' | N9 | 164.6° | 154.5° |
| C3' | C2' | C1' | H1' | 78.7° | 85.2° |
| H3' | C3' | O3' | HO3' | 42.6° | 171.2° |
| H3' | C3' | C2' | C1' | 154.6° | 158.8° |
| H3' | C3' | C2' | H2'1 | 34.6° | 41.7° |
| H3' | C3' | C2' | H2'2 | 82.3° | 80.8° |
| C1' | C2' | H2'1 | H2'2 | 123.6° | 122.9° |
| C2' | C1' | N9 | H1' | 121.3° | 123.5° |
| C2' | C1' | N9 | C8 | 57.7° | 86.6° |
| C2' | C1' | N9 | C4 | 122.5° | 93.4° |
| H2'1 | C2' | C1' | N9 | 44.6° | 37.8° |
| H2'1 | C2' | C1' | H1' | 161.3° | 158.1° |
| C1' | N9 | C8 | C4 | 179.8° | 180.0° |
| C1' | N9 | C8 | N7 | 178.3° | 180.0° |
| C1' | N9 | C8 | H8 | 1.7° | 0.0° |
| C1' | N9 | C4 | C5 | 179.0° | 180.0° |
| C1' | N9 | C4 | N3 | 1.1° | 0.0° |
| N9 | C1' | C2' | H2'2 | 72.3° | 83.3° |
| H1' | C1' | N9 | C8 | 179.1° | 150.0° |
| H1' | C1' | N9 | C4 | 1.2° | 30.0° |
| H1' | C1' | C2' | H2'2 | 44.3° | 37.0° |
| N9 | C8 | N7 | H8 | 180.0° | 180.0° |
| N9 | C8 | N7 | C5 | 1.5° | 0.0° |
| C8 | N9 | C4 | C5 | 0.8° | 0.0° |
| C8 | N9 | C4 | N3 | 179.1° | 180.0° |
| C4 | N9 | C8 | N7 | 1.5° | 0.0° |
| C4 | N9 | C8 | H8 | 178.5° | 180.0° |
| N9 | C4 | C5 | N7 | 0.0° | 0.0° |
| N9 | C4 | C5 | C6 | 179.4° | 180.0° |
| N9 | C4 | C5 | N3 | 179.9° | 180.0° |
| N9 | C4 | N3 | C2 | 178.9° | 180.0° |
| C8 | N7 | C5 | C6 | 179.9° | 180.0° |
| C8 | N7 | C5 | C4 | 0.9° | 0.0° |
| H8 | C8 | N7 | C5 | 178.5° | 180.0° |
| N7 | C5 | C6 | C4 | 179.2° | 179.9° |
| N7 | C5 | C6 | O6 | 1.6° | 0.1° |
| N7 | C5 | C6 | N1 | 178.7° | 180.0° |
| N7 | C5 | C4 | N3 | 180.0° | 180.0° |
| C5 | C6 | O6 | N1 | 179.7° | 179.9° |
| C5 | C6 | N1 | C2 | 2.1° | 0.0° |
| C5 | C6 | N1 | H1 | 177.9° | 180.0° |
| C6 | C5 | C4 | N3 | 0.7° | 0.0° |
| C4 | C5 | C6 | O6 | 177.6° | 180.0° |
| C4 | C5 | C6 | N1 | 2.1° | 0.1° |
| C5 | C4 | N3 | C2 | 1.1° | 0.0° |
| O6 | C6 | N1 | C2 | 177.7° | 180.0° |
| O6 | C6 | N1 | H1 | 2.3° | 0.1° |
| C6 | N1 | C2 | H1 | 180.0° | 180.0° |
| C6 | N1 | C2 | N2 | 180.0° | 180.0° |
| C6 | N1 | C2 | N3 | 0.4° | 0.0° |
| N1 | C2 | N2 | N3 | 179.7° | 180.0° |
| N1 | C2 | N2 | H21 | 180.0° | 42.6° |
| N1 | C2 | N2 | H22 | 0.0° | 137.4° |
| N1 | C2 | N3 | C4 | 1.2° | 0.0° |
| H1 | N1 | C2 | N2 | 0.0° | 0.0° |
| H1 | N1 | C2 | N3 | 179.6° | 180.0° |
| C2 | N2 | H21 | H22 | 180.0° | 180.0° |
| N2 | C2 | N3 | C4 | 178.4° | 180.0° |
| N3 | C2 | N2 | H21 | 0.3° | 137.4° |
| N3 | C2 | N2 | H22 | 179.7° | 42.7° |
