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G2M

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.36Å1.38Å
N1C6sing1.35Å1.39Å
N1HN1sing0.97Å1.00Å
C2N2sing1.37Å1.34Å
C2N3doub1.31Å1.31Å
N2HN2sing0.97Å1.00Å
N2HN2Asing0.97Å1.00Å
N3C4sing1.34Å1.35Å
C4C5doub1.40Å1.38ÅAromatic
C4N9sing1.37Å1.37ÅAromatic
C5C6sing1.41Å1.41Å
C5N7sing1.36Å1.39ÅAromatic
C6O6doub1.22Å1.23Å
N7C8doub1.30Å1.30ÅAromatic
C8N9sing1.36Å1.38ÅAromatic
C8H8sing1.08Å1.08Å
N9C1'sing1.47Å1.46Å
PAO1Adoub1.48Å1.48Å
PAO2Asing1.61Å1.72Å
PAO3Asing1.61Å1.51Å
PAO5'sing1.61Å1.59Å
PBO1Bsing1.61Å1.72Å
PBO2Bdoub1.48Å1.48Å
PBO3Asing1.61Å1.51Å
PBC3Bsing1.82Å1.88Å
PGO1Gsing1.61Å1.72Å
PGO2Gsing1.61Å1.72Å
PGC3Bsing1.82Å1.87Å
PGO3Gdoub1.48Å1.48Å
C1'C2'sing1.54Å1.53Å
C1'O4'sing1.44Å1.43Å
C1'H1'sing1.09Å1.10Å
C2'C3'sing1.55Å1.51Å
C2'H2'sing1.09Å1.10Å
C2'H2'Asing1.09Å1.10Å
C3'O3'sing1.43Å1.44Å
C3'C4'sing1.55Å1.52Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C3BC3B2sing1.53Å1.52Å
C3BC3B3sing1.53Å1.53Å
C3B2HC3Bsing1.09Å1.10Å
C3B2HC3Asing1.09Å1.10Å
C3B2HC3Csing1.09Å1.10Å
C3B3HC3Dsing1.09Å1.10Å
C3B3HC3Esing1.09Å1.10Å
C3B3HC3Fsing1.09Å1.10Å
C4'O4'sing1.44Å1.44Å
C4'C5'sing1.53Å1.51Å
C4'H4'sing1.09Å1.10Å
C5'O5'sing1.43Å1.43Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O1BH19sing0.97Å0.95Å
O1GH20sing0.97Å0.95Å
O2AH21sing0.97Å0.95Å
O2GH22sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6125.0°120.4°
C2N1HN1117.5°119.8°
N1C2N2117.2°119.1°
N1C2N3123.7°121.9°
C6N1HN1117.5°119.8°
N1C6C5111.6°118.3°
N1C6O6120.0°120.9°
N2C2N3119.2°119.1°
C2N2HN2120.0°120.0°
C2N2HN2A120.0°120.0°
C2N3C4112.0°121.1°
HN2N2HN2A120.0°120.0°
N3C4C5129.0°119.7°
N3C4N9125.5°134.2°
C5C4N9105.5°106.1°
C4C5C6118.7°118.6°
C4C5N7110.8°107.3°
C4N9C8106.5°107.5°
C4N9C1'125.5°126.3°
C6C5N7130.5°134.1°
C5C6O6128.4°120.8°
C5N7C8104.3°109.4°
N7C8N9112.9°109.8°
N7C8H8123.6°125.1°
N9C8H8123.6°125.1°
C8N9C1'128.0°126.2°
N9C1'C2'111.4°109.9°
N9C1'O4'108.6°109.9°
N9C1'H1'108.0°109.8°
O1APAO2A119.0°109.4°
O1APAO3A110.2°109.5°
O1APAO5'106.1°109.5°
O2APAO3A108.8°109.5°
O2APAO5'106.5°109.5°
PAO2AH21109.5°114.0°
O3APAO5'105.3°109.5°
PAO3APB130.0°134.0°
PAO5'C5'120.3°123.0°
O1BPBO2B119.6°109.5°
O1BPBO3A104.8°109.4°
O1BPBC3B105.2°109.5°
PBO1BH19109.5°114.0°
O2BPBO3A110.0°109.5°
O2BPBC3B107.2°109.5°
O3APBC3B109.7°109.4°
PBC3BPG115.1°109.4°
PBC3BC3B2107.6°109.4°
PBC3BC3B3108.2°109.5°
O1GPGO2G119.4°109.5°
O1GPGC3B103.1°109.5°
O1GPGO3G108.2°109.5°
PGO1GH20109.5°114.0°
O2GPGC3B108.5°109.5°
O2GPGO3G108.7°109.5°
PGO2GH22109.5°114.0°
C3BPGO3G108.5°109.5°
PGC3BC3B2107.0°109.5°
PGC3BC3B3107.7°109.5°
C2'C1'O4'107.0°107.3°
C2'C1'H1'109.6°109.9°
C1'C2'C3'102.0°104.2°
C1'C2'H2'112.1°110.5°
C1'C2'H2'A112.1°110.5°
O4'C1'H1'112.3°110.0°
C1'O4'C4'108.8°107.0°
C3'C2'H2'112.0°110.5°
C3'C2'H2'A112.0°110.5°
C2'C3'O3'111.2°110.9°
C2'C3'C4'100.9°102.1°
C2'C3'H3'114.6°110.9°
H2'C2'H2'A106.8°110.5°
O3'C3'C4'111.5°110.9°
O3'C3'H3'104.5°110.8°
C3'O3'HO3'109.5°114.0°
C4'C3'H3'114.3°110.9°
C3'C4'O4'104.0°103.5°
C3'C4'C5'116.2°110.6°
C3'C4'H4'108.8°110.6°
C3B2C3BC3B3111.3°109.5°
C3BC3B2HC3B109.5°109.5°
C3BC3B2HC3A109.5°109.4°
C3BC3B2HC3C109.5°109.5°
C3BC3B3HC3D109.5°109.4°
C3BC3B3HC3E109.5°109.5°
C3BC3B3HC3F109.5°109.5°
HC3BC3B2HC3A109.5°109.4°
HC3BC3B2HC3C109.5°109.6°
HC3AC3B2HC3C109.5°109.5°
HC3DC3B3HC3E109.5°109.4°
HC3DC3B3HC3F109.4°109.4°
HC3EC3B3HC3F109.4°109.5°
O4'C4'C5'109.5°110.6°
O4'C4'H4'115.6°110.6°
C5'C4'H4'103.2°110.6°
C4'C5'O5'110.5°109.5°
C4'C5'H5'109.1°109.5°
C4'C5'H5'A109.1°109.5°
O5'C5'H5'109.1°109.4°
O5'C5'H5'A109.1°109.5°
H5'C5'H5'A109.9°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6HN1180.0°179.8°
N1C2N2N3179.2°179.9°
N1C2N2HN2179.2°0.1°
N1C2N2HN2A0.8°180.0°
N1C2N3C41.9°0.1°
C2N1C6C50.2°0.0°
C2N1C6O6179.1°179.9°
C6N1C2N2177.5°180.0°
C6N1C2N31.7°0.0°
N1C6C5C41.5°0.0°
N1C6C5O6179.2°179.9°
N1C6C5N7179.1°180.0°
HN1N1C2N22.6°0.3°
HN1N1C2N3178.3°179.8°
HN1N1C6C5179.9°179.8°
HN1N1C6O60.9°0.2°
C2N2HN2HN2A180.0°179.9°
N2C2N3C4177.3°180.0°
N3C2N2HN20.0°180.0°
N3C2N2HN2A180.0°0.1°
C2N3C4C50.4°0.0°
C2N3C4N9178.7°180.0°
N3C4C5N9178.6°180.0°
N3C4C5C61.4°0.0°
N3C4C5N7179.1°180.0°
N3C4N9C8178.7°180.0°
N3C4N9C1'4.1°0.0°
C4C5C6N7179.4°180.0°
C4C5C6O6177.7°180.0°
C4C5N7C81.0°0.0°
C5C4N9C82.6°0.0°
C5C4N9C1'174.6°180.0°
N9C4C5C6177.2°180.0°
N9C4C5N72.3°0.0°
C4N9C8N72.3°0.1°
C4N9C8C1'177.1°180.0°
C4N9C8H8177.7°180.0°
C4N9C1'C2'98.9°85.0°
C4N9C1'O4'143.5°157.2°
C4N9C1'H1'21.5°36.0°
C6C5N7C8178.5°179.9°
N7C5C6O61.7°0.0°
C5N7C8N90.8°0.1°
C5N7C8H8179.2°180.0°
N7C8N9H8180.0°179.9°
N7C8N9C1'174.9°179.9°
C8N9C1'C2'77.7°95.0°
C8N9C1'O4'39.9°22.8°
C8N9C1'H1'161.9°144.0°
H8C8N9C1'5.2°0.0°
N9C1'C2'O4'118.6°119.5°
N9C1'C2'H1'119.4°121.0°
N9C1'O4'H1'119.3°121.0°
N9C1'C2'C3'94.8°121.5°
N9C1'C2'H2'145.2°119.9°
N9C1'C2'H2'A25.2°2.8°
N9C1'O4'C4'121.9°145.9°
O1APAO2AO3A127.3°120.0°
O1APAO2AO5'119.7°119.9°
O1APAO3AO5'114.1°120.0°
O1APAO3APB7.3°40.0°
O1APAO5'C5'55.7°54.9°
O1APAO2AH210.0°180.0°
O2APAO3AO5'113.8°120.0°
O2APAO3APB124.9°79.9°
O2APAO5'C5'176.5°65.0°
PAO3APBO1B162.6°60.0°
PAO3APBO2B32.8°60.0°
PAO3APBC3B84.9°180.0°
O3APAO5'C5'61.1°174.9°
O3APAO2AH21127.2°60.0°
O5'PAO3APB121.3°160.1°
PAO5'C5'C4'119.4°180.0°
PAO5'C5'H5'120.6°60.0°
PAO5'C5'H5'A0.6°60.0°
O5'PAO2AH21119.7°60.0°
O1BPBO2BO3A121.3°120.0°
O1BPBO2BC3B119.4°120.1°
O1BPBO3AC3B112.5°120.0°
O1BPBC3BPG138.8°65.0°
O1BPBC3BC3B2102.1°55.0°
O1BPBC3BC3B318.3°175.0°
O2BPBO3AC3B117.7°120.0°
O2BPBC3BPG10.5°55.0°
O2BPBC3BC3B2129.7°175.0°
O2BPBC3BC3B3110.0°65.0°
O2BPBO1BH190.0°180.0°
O3APBC3BPG108.9°175.0°
O3APBC3BC3B210.2°65.0°
O3APBC3BC3B3130.6°55.0°
O3APBO1BH19123.9°60.0°
PBC3BPGO1G38.7°175.0°
PBC3BPGO2G166.2°65.0°
PBC3BPGC3B2119.5°120.0°
PBC3BPGC3B3120.8°120.0°
PBC3BPGO3G75.8°55.0°
PBC3BC3B2C3B3118.3°120.0°
PBC3BC3B2HC3B180.0°60.1°
PBC3BC3B2HC3A60.0°180.0°
PBC3BC3B2HC3C60.0°60.0°
PBC3BC3B3HC3D180.0°60.0°
PBC3BC3B3HC3E60.0°179.9°
PBC3BC3B3HC3F60.0°60.0°
C3BPBO1BH19120.4°60.0°
O1GPGO2GC3B117.5°120.0°
O1GPGO2GO3G124.7°120.0°
O1GPGC3BO3G114.6°120.0°
O1GPGC3BC3B280.8°55.1°
O1GPGC3BC3B3159.5°65.0°
O1GPGO2GH22124.7°60.0°
O2GPGC3BO3G118.0°120.0°
O2GPGC3BC3B246.7°175.0°
O2GPGC3BC3B373.1°55.0°
O2GPGO1GH20124.9°60.0°
PGC3BC3B2C3B3117.4°120.0°
PGC3BC3B2HC3B55.8°180.0°
PGC3BC3B2HC3A175.8°60.0°
PGC3BC3B2HC3C64.2°59.9°
PGC3BC3B3HC3D55.0°60.0°
PGC3BC3B3HC3E65.0°59.9°
PGC3BC3B3HC3F175.0°180.0°
C3BPGO1GH20114.8°180.0°
C3BPGO2GH22117.8°60.0°
O3GPGC3BC3B2164.7°65.0°
O3GPGC3BC3B344.9°175.0°
O3GPGO1GH200.0°60.0°
O3GPGO2GH220.0°180.0°
C2'C1'O4'H1'120.3°119.5°
C1'C2'C3'H2'120.0°118.6°
C1'C2'C3'H2'A120.0°118.7°
C1'C2'H2'H2'A123.1°122.6°
C1'C2'C3'O3'156.6°139.1°
C1'C2'C3'C4'38.2°20.9°
C1'C2'C3'H3'85.1°97.4°
C2'C1'O4'C4'1.5°26.5°
O4'C1'C2'C3'23.8°2.0°
O4'C1'C2'H2'96.2°120.7°
O4'C1'C2'H2'A143.8°116.7°
C1'O4'C4'C3'26.3°40.0°
C1'O4'C4'C5'151.1°158.5°
C1'O4'C4'H4'92.9°78.5°
H1'C1'C2'C3'145.8°117.6°
H1'C1'C2'H2'25.8°1.1°
H1'C1'C2'H2'A94.2°123.7°
H1'C1'O4'C4'118.8°93.0°
C3'C2'H2'H2'A123.0°122.6°
C2'C3'O3'C4'111.8°112.7°
C2'C3'O3'H3'124.2°123.6°
C2'C3'C4'H3'123.5°118.2°
C2'C3'O3'HO3'180.0°61.4°
C2'C3'C4'O4'40.2°37.0°
C2'C3'C4'C5'160.6°155.5°
C2'C3'C4'H4'83.5°81.5°
H2'C2'C3'O3'36.6°20.4°
H2'C2'C3'C4'81.8°97.8°
H2'C2'C3'H3'154.9°144.0°
H2'AC2'C3'O3'83.4°102.2°
H2'AC2'C3'C4'158.2°139.6°
H2'AC2'C3'H3'34.9°21.3°
O3'C3'C4'H3'118.3°123.6°
O3'C3'C4'O4'158.4°155.2°
O3'C3'C4'C5'81.3°86.3°
O3'C3'C4'H4'34.6°36.7°
C4'C3'O3'HO3'68.3°174.2°
C3'C4'O4'C5'124.8°118.5°
C3'C4'O4'H4'119.2°118.5°
C3'C4'C5'H4'119.0°122.9°
C3'C4'C5'O5'55.3°175.0°
C3'C4'C5'H5'175.3°55.0°
C3'C4'C5'H5'A64.7°65.0°
H3'C3'O3'HO3'55.8°62.2°
H3'C3'C4'O4'83.3°81.2°
H3'C3'C4'C5'37.1°37.3°
H3'C3'C4'H4'153.0°160.2°
C3BC3B2HC3BHC3A120.0°119.9°
C3BC3B2HC3BHC3C120.0°120.1°
C3BC3B2HC3AHC3C120.0°119.9°
C3B2C3BC3B3HC3D62.0°180.0°
C3B2C3BC3B3HC3E178.0°60.1°
C3B2C3BC3B3HC3F58.0°60.0°
C3B3C3BC3B2HC3B61.6°59.9°
C3B3C3BC3B2HC3A58.4°60.0°
C3B3C3BC3B2HC3C178.3°180.0°
C3BC3B3HC3DHC3E120.0°120.0°
C3BC3B3HC3DHC3F120.0°120.0°
C3BC3B3HC3EHC3F120.0°120.1°
HC3BC3B2HC3AHC3C120.0°120.1°
HC3DC3B3HC3EHC3F119.9°120.0°
O4'C4'C5'H4'123.6°123.0°
O4'C4'C5'O5'62.1°70.9°
O4'C4'C5'H5'57.9°169.1°
O4'C4'C5'H5'A177.9°49.1°
C4'C5'O5'H5'120.0°120.0°
C4'C5'O5'H5'A120.0°120.0°
C4'C5'H5'H5'A119.6°120.0°
H4'C4'C5'O5'174.3°52.0°
H4'C4'C5'H5'65.7°67.9°
H4'C4'C5'H5'A54.3°172.0°
O5'C5'H5'H5'A119.6°120.0°

222624

PDB entries from 2024-07-17

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